Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4054 ATGGAGAAGAAAATGACTCAGTTGGGAAAGAGAACAAGAAGATCTCAAGCTGCAGAAATATTTTCCGATGAACCTCCTCCGTCAACCAAAAAAATTAATACTACCACGGCGAACATATTCTCGCTTTATCCACTATTCGCTCCTCCTGTTGAGGAATGCTACTCCAGTATCACCGAGGAATCCTCCTCCGCATCAAGTTGTTCCAGTAACAAACTCTCTGATACAGAGGTTGAGAGTACGCAAGTTGAAACGTTGAAGTTCAACGGTGATCAAATTATAAGGAGAAGAGAGATGGGTTTGTTAAGCGAAGTGGTTGGAACGAATTGTACAGAGCAAGAGGAAGAAGAAGTTGATTCAGCTGAGAATAAGCTGCAAAAGATGCCAACAGAAGCTGAACTTGATGAATTTTTCTCTGTAGCTGAAAAAGATGTTCAGAAACAGTTTCAAAACAAGTATAATTTCGATATTGTGAAGGACATGCCTTTGGAAGGACGTTATGAGTGGGTTCAATTAAAGCCATAA 522 0.4023 MEKKMTQLGKRTRRSQAAEIFSDEPPPSTKKINTTTANIFSLYPLFAPPVEECYSSITEESSSASSCSSNKLSDTEVESTQVETLKFNGDQIIRRREMGLLSEVVGTNCTEQEEEEVDSAENKLQKMPTEAELDEFFSVAEKDVQKQFQNKYNFDIVKDMPLEGRYEWVQLKP* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4054 173 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 49 173 - -
Tpr4g4054 173 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 49 173 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tpr4g4054 173 Coils Coil 110 130 - -
Tpr4g4054 173 MobiDBLite consensus disorder prediction 1 29 - -
Tpr4g4054 173 Pfam Cyclin-dependent kinase inhibitor 127 171 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tpr4g4054 173 Gene3D p27 111 173 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4054 Tpr-Chr4 47226638 47229220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4054 65 173 Core Cell Cycle Gene Families AT1G49620 40.367 7.75e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4054 - - gmx:548057 125.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0861 2 10560663 10562695 Tpr4g4054 4 47226638 47229220 PCT