Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4033 ATGAATATTTATATTACTAAGGAAGAGATAGAGGGAAAAACACCCATTCCTTACAAAGATATTGGTCACAAGTCTCTACTTCGGAGTGATGCACTTTATAATTATATAGTTGAAACTAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAGCTCCGTGACATAACAGATAAACATCCATTGAACCTTATGGCTACATCAGCTGATGAAGGACAATTATTAAGCATGTTGATTAAGCTAATCAATGCAAAGAACACATTAGAAATTGGTGTGTACACTGGTTACTCTCTGCTCTGCACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTGTTGGCTTTGGACATTAGTCGTGAATACTATGAGTTGGGATTGCCTATGATTGAAAAAGCTGGAGTGGCTCACAAGATAGACTTTAGAGAAGGACTTGCTCTCCCTCTTCTTGACCAACTTCTTCAAGATGAAAATAATAAGGGGACATTTGATTTTGTTTTTGTGGATGCGGATAAGAATAACTACTTAAACTATCATAAGAAGGTGATTGAACTTGTGAAAGTTGGGGGATTAATCGGATACGATAATACTTTATGGACTGGATCAGTTGCGCTTCCAGATGATGCACCTATGTTGGAGTTCATTAGGAATTATCGTGGTTATGTGATTGAGGTCAACAAGTATCTTGCTCAAGATTCAAGGATCGAGATTTGCCAACTTGCAGTAGGTGATGGAATTACCTTGTGTCGTCGCATTGGTTAA 753 0.3865 MNIYITKEEIEGKTPIPYKDIGHKSLLRSDALYNYIVETSVFPREHPCLKELRDITDKHPLNLMATSADEGQLLSMLIKLINAKNTLEIGVYTGYSLLCTALALPSDGKVLALDISREYYELGLPMIEKAGVAHKIDFREGLALPLLDQLLQDENNKGTFDFVFVDADKNNYLNYHKKVIELVKVGGLIGYDNTLWTGSVALPDDAPMLEFIRNYRGYVIEVNKYLAQDSRIEICQLAVGDGITLCRRIG* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4033 250 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 16 249 - -
Tpr4g4033 250 CDD AdoMet_MTases 87 189 - -
Tpr4g4033 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 248 IPR029063 -
Tpr4g4033 250 Gene3D Vaccinia Virus protein VP39 16 250 IPR029063 -
Tpr4g4033 250 PANTHER O-METHYLTRANSFERASE-RELATED 16 249 - -
Tpr4g4033 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 25 249 IPR002935 GO:0008171
Tpr4g4033 250 Pfam O-methyltransferase 39 249 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4033 Tpr-Chr4 46979040 46980462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4033 18 250 Monolignol Biosynthesis Gene Families AT4G34050 70.815 3.92e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4033 K00588 - gmx:100305498 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4033 4 46979040 46980462 Tpr4g4033 4 46979040 46980462 ECH