Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4029 ATGGCTTTCAATAACAATGAAGAGAAACAGGAAAACCAACCCATAGCATTCAAAGTATACAGTGATCTTTTTTTATTTAATAAACAAAAGACTCTTCTTCAGAGTAATGCACTGTATCAGTATGTACTTGAAACAAGTGTGTTTCCAAAAGAGCACCCGTCTTTGAAGGAGCTCCGTGATATGACAGAAAAACACCCTCGGAGCCATATGGCTACCCCCGCGGATGAAGGACAACTTATAAGCATGTTGGTTAAACTGATAAATGCAAAGAACACAATGGAAATTGGTGTATACACAGGTTACTCTTTGCTCTCTACTGCTCTTGCTCTTCCCTCCGATGGAAAGGTTGTGGCTTTGGACATTACTCGTGAATACTATGAATTGGGATTGCCTATGATTGAAAAAGCTGGAGTGATTCACAAGATCGACTTTCGAGAAGGACATGCTCTCTTTCTTCTTGACGAACTTCTTCAAGATGAAAATAACAAGGGGACATTTGATTTTGTTTTTGTTGATGCTGATAAGGAGAATTACATAAACTATCATAAGAAAGTGATTGATCTTGTAAAAGTTGGCGGATTAATTGGATATGATAACACTTTATGGAGTGGATCAGTTGCGCTTCCCCCTGATGCACCTATGGAGGAGTTCATTAGAGATTTACGTGGTCATGTGATTGAGGTCAACAAATATCTAGCTCAAGATTCAAGGATCGAAATTTGTCAACTTACAGTAGCTGATGGAATTACCCTTTGCCGCCGCATTAGTTGA 771 0.3904 MAFNNNEEKQENQPIAFKVYSDLFLFNKQKTLLQSNALYQYVLETSVFPKEHPSLKELRDMTEKHPRSHMATPADEGQLISMLVKLINAKNTMEIGVYTGYSLLSTALALPSDGKVVALDITREYYELGLPMIEKAGVIHKIDFREGHALFLLDELLQDENNKGTFDFVFVDADKENYINYHKKVIDLVKVGGLIGYDNTLWSGSVALPPDAPMEEFIRDLRGHVIEVNKYLAQDSRIEICQLTVADGITLCRRIS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4029 256 Pfam O-methyltransferase 45 255 IPR002935 GO:0008171
Tpr4g4029 256 PANTHER O-METHYLTRANSFERASE-RELATED 29 255 - -
Tpr4g4029 256 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 31 255 IPR002935 GO:0008171
Tpr4g4029 256 Gene3D Vaccinia Virus protein VP39 23 256 IPR029063 -
Tpr4g4029 256 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 254 IPR029063 -
Tpr4g4029 256 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 29 255 - -
Tpr4g4029 256 CDD AdoMet_MTases 94 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4029 Tpr-Chr4 46936694 46945286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4029 29 256 Monolignol Biosynthesis Gene Families AT4G34050 70.175 3.83e-122 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4029 K00588 - gmx:100305498 371.318