Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4028 ATGGATAGCGAGCTTTATTCTTCATCATTGATAGAGCTTTTGTTCTCAAAGTCCAAAAAAAAACTTGCACAAGAGATGGCTGTCAATCATGAAGACAACAAACCCGTAGGACACAAATTATACAGTGAACTCGCTCACAAATCTCTTCTTCGGAGTGATGCACTATATAAGTATGTACTTGATACCAGTGTGTTTCCAAGAGAGCACCCGTGTTTGAAGGAGCTCCGTGAGATGACAGATAAACACCCTCGGAACGTTATGTCTACACCCGCAGATGAAGGACAACTTATAAGCATGCTTGTTAAGCTCATCAATGCAAAGAACACGATGGAAATTGGTGTATATACTGGTTACTCTCTGCTCTCTACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTTTTGGCTTTGGACATCAATCGCGAATACTATGAGTTGGGATTGCCTATGATTGAAAAAGCTGGAGTGGCTCACAAGATAGACTTTAGAGAAGTATCTGCTCTATCTTTTCTTGACCAACTTCTTCAAGATGAAAATAATAAGGAGACATTTGATTTTGTTTTTGTGGATGCTGATAAGGATAATTACTTAAACTATCATAAGAGGGTGATTGATCTTGTGAAAGTTGGGGGATTGATCGGATACGATAATACTTTATGGACGGGATCAGTTGCGCTTCCACCTGATGCACCTATGTTGGAGTTCATTAGGGGTTATCGTGATTATGTGATTGAGCTCAACAAGTATCTAGCTCAAGATTCGAGGGTCGAAATTTGTCAACTCACAGTAGGTGATGGGATTACCCTATGCCGCCGCATTAGTTGA 822 0.4075 MDSELYSSSLIELLFSKSKKKLAQEMAVNHEDNKPVGHKLYSELAHKSLLRSDALYKYVLDTSVFPREHPCLKELREMTDKHPRNVMSTPADEGQLISMLVKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDINREYYELGLPMIEKAGVAHKIDFREVSALSFLDQLLQDENNKETFDFVFVDADKDNYLNYHKRVIDLVKVGGLIGYDNTLWTGSVALPPDAPMLEFIRGYRDYVIELNKYLAQDSRVEICQLTVGDGITLCRRIS* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4028 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 271 IPR029063 -
Tpr4g4028 273 PANTHER O-METHYLTRANSFERASE-RELATED 38 272 - -
Tpr4g4028 273 Gene3D Vaccinia Virus protein VP39 38 273 IPR029063 -
Tpr4g4028 273 CDD AdoMet_MTases 111 212 - -
Tpr4g4028 273 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 38 272 - -
Tpr4g4028 273 Pfam O-methyltransferase 65 272 IPR002935 GO:0008171
Tpr4g4028 273 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 48 272 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4028 Tpr-Chr4 46924406 46926882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4028 29 273 Monolignol Biosynthesis Gene Families AT4G34050 69.796 3.22e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4028 K00588 - gmx:100795858 385.956