Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4027 ATGACAGGCATTCGACTTATCTCAACTACTACAATCCAAGCAACAAAACATGATGAGAACAACTCAACACACAAAAAAATAGATTTAACTCCATGGGATCTAACATTACTCAAAATTGAAACAATCCAACAAGGCCTTCTTTTCCATAAACCCAAAACAAACCAAATCCAACATCTTAAACAAACACTTTCCACCACTCTCAACTTCTTCCCACCTCTCACCGGTCGTCTTGTAATAACACGACACGACGAACATAACAAAGCCTCATGTTCTGTCATTTGCAACAATGTTGGTGCATTGTTCGTCCACGCTATAGCAGAAAACACTACCATCGCGGACATTACTCAACCCAACTATGTACCTCCCATTGTTCACGCATTATTCCCACTCAACGGAGTTAAAAACTACGAAGGCACAACTCAACCGGTTCTTGCAGTTCAAGTAACAGAGTTAATCGACGGCATTTTCATTGGTTTCGCAATTAACCACCTTGTTGCAGACGGTAAGTCATTTTGGCTTTTCGTTAATTCTTGGGCCGAAATCTCTCGTGGTTTCAATAAACCAACCAAAATCCCTACTTTTGAACGTTGGTTTCCAGACGACATTAACCGTCCCATACAGTTTCCTTTCACAGAGGATGCACAAAAGAAACAACGTGAAATTCCACCAATTCGACTCTTCCACTTCACAAAAGAAAAAGTTGCACAACTCAAATCAAAAGCTAATGCAGAGATTGGTCATAGTAGTACTAATAATACTGATAAAATAATAATAATATCTTCATTTCAAGCGCTTATAACTCACATTTGGCGTTCAAGTGCGAGTAAGCAACATGCCGAACCAGGAGAAGAGACTAGTTTTGCCTTAGTGATGGATTGTAGGACAAGAATGTGTCCAAATTTGGGAGAAAATTATTTTGGAAATACAAGAGTGTTTGAAATTGTAACAATGAAAACTAAGGAACTAATGGAAGGTGGGATTGGCAAGGTTAGTATGGAAATAAACAAGGTGATTAGTACACAATCTCATGAGAAGATAATGAATCAATACGAGTCTTGGTTGAAAACACCAATTATAATTGTGCCGGGTATGCTGTCTAGAAGTAATGTGTTGATGGCAAACAGTTCACCAAGGTTCGATGTTTATGGTAATGACTTTGGTTGGGGTAAGCCAATAGCAGTTAGAAATGGTGTTGGAAATAAAAGTATTGGTAAAGTTACTGTGTTTGCTGGGTTTGAACAAGGTAGTATTGATGTTGAACTTTGTCTTCCTTATGATGTTTTGGAAGCTTTGGGAAATGACCAATTGTTCTTGGATGCTATGTCTGTCTAA 1332 0.3836 MTGIRLISTTTIQATKHDENNSTHKKIDLTPWDLTLLKIETIQQGLLFHKPKTNQIQHLKQTLSTTLNFFPPLTGRLVITRHDEHNKASCSVICNNVGALFVHAIAENTTIADITQPNYVPPIVHALFPLNGVKNYEGTTQPVLAVQVTELIDGIFIGFAINHLVADGKSFWLFVNSWAEISRGFNKPTKIPTFERWFPDDINRPIQFPFTEDAQKKQREIPPIRLFHFTKEKVAQLKSKANAEIGHSSTNNTDKIIIISSFQALITHIWRSSASKQHAEPGEETSFALVMDCRTRMCPNLGENYFGNTRVFEIVTMKTKELMEGGIGKVSMEINKVISTQSHEKIMNQYESWLKTPIIIVPGMLSRSNVLMANSSPRFDVYGNDFGWGKPIAVRNGVGNKSIGKVTVFAGFEQGSIDVELCLPYDVLEALGNDQLFLDAMSV* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4027 443 Gene3D - 2 205 IPR023213 -
Tpr4g4027 443 Gene3D - 210 433 IPR023213 -
Tpr4g4027 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 440 - -
Tpr4g4027 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 440 - -
Tpr4g4027 443 Pfam Transferase family 7 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4027 Tpr-Chr4 46913813 46915605 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4027 57 397 Monolignol Biosynthesis Gene Families AT5G48930 24.332 2.02e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4027 - - mtr:MTR_4g094828 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4027 4 46913813 46915605 Tpr4g4027 4 46913813 46915605 ECH