Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4025 ATGGCTGGCAATAATGAAGAGAAACAGCAAAACAAACCCATTGGACTCATTGATCTCTCTCACAAGACTCTCCTTCAGAGTGATGCACTATATCAGTATATACTTGAAACCAGTGTGTTTCCAAGAGAGCATCCATGTTTGAAGGAGCTCCGTGAGATGACAAATAAACACCCTCGGAACCTTATGGCTACACCTGCTGATGAAGGACAACTTATAAGCATGTTGATTAAGCTTATAAATGCAAAGAATACGATGGAAATTGGTGTGTACACCGGTTACTCTCTGTTATCTACTGCTCTTGCTCTTCCCTCTGATGGAAAGGTATTGGCTTTGGATGTGAATCGTGAATACTATGAGCTGGGATTGCCCATAATTGAAAAAGCTGGGGTGGCTCACAAGATTGACTTTAGAGAAGGAAATGCTCTCCCTCTTCTTGACCAACTTCTTCAAGATGAAAATAACAAGGGAACATTTGACTTTATTTTCGTGGATGCTGATAAGAATAACTACTTAAACTATCACAAGAGGGTTATTGATCTTGTAAAAGTTGGGGGATTAATTGGATACGATAACACTTTATGGAGTGGATCTGTAGCGGCTCCACCTGATACACCTATGTTGAATTTCGTTAGGGAGTTGCGTGATTATGTGATTGAACTCAACAAGTATCTAGCTCAAGATTCAAGGATCGAGATTTGTCAACTCCCGGTGGGTGATGGGATTACCCTATGTCGCCGCATCAATTGA 747 0.4096 MAGNNEEKQQNKPIGLIDLSHKTLLQSDALYQYILETSVFPREHPCLKELREMTNKHPRNLMATPADEGQLISMLIKLINAKNTMEIGVYTGYSLLSTALALPSDGKVLALDVNREYYELGLPIIEKAGVAHKIDFREGNALPLLDQLLQDENNKGTFDFIFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWSGSVAAPPDTPMLNFVRELRDYVIELNKYLAQDSRIEICQLPVGDGITLCRRIN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4025 248 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 23 247 IPR002935 GO:0008171
Tpr4g4025 248 PANTHER O-METHYLTRANSFERASE-RELATED 1 247 - -
Tpr4g4025 248 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 27 246 IPR029063 -
Tpr4g4025 248 Pfam O-methyltransferase 37 247 IPR002935 GO:0008171
Tpr4g4025 248 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 1 247 - -
Tpr4g4025 248 Gene3D Vaccinia Virus protein VP39 15 248 IPR029063 -
Tpr4g4025 248 CDD AdoMet_MTases 86 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4025 Tpr-Chr4 46899986 46903307 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4025 4 248 Monolignol Biosynthesis Gene Families AT4G34050 73.061 2.46e-136 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4025 K00588 - gmx:100305498 410.994