Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4013 ATGAATAGTTTAATAACACTCTTCTATCTCTTCTTTTACTTCACATTTTCTTCCTCTACAAACTCCACCCTCCATCAAGACGCAGTATCCCTACTATCCTTCAAACAAAACGCAGACCAAAACAACAAACTCCTCTACACATTAAACGAACCTTATGACTACTGTGAATGGCAAGGAGTTAAATGCGCACAAGGCAGAGTAGTGCGCTATGTTGTTCAAGGCTTAAACCTTCACGGTTTTTTCTCTCCAAATACTCTAACCCAACTCGACCAACTCCGAGTCATGAGTCTTCGTAATAATTCATTATTCGGACCCATTCCGGATCTATCACCACTCATTAACCTCAAATCACTTTTTCTCGACCATAATAATTTCTCCGCTTCATTTCCTCCTTCTATTGTTTTCCTTCACAGGCTTACTACTCTTTCACTCTCTCATAATAACTTCACCGGTTTACTTCCGGTTCAATTAACTCTCCTTGACCGTCTCATTATACTTCGGCTTGACTCAAACTCATTCACCGGTTCTCTTCCACCTCTCAACCAAACCGATTTAAAAATATTTAACATCTCTGCCAATAATTTCACCGGTCCAGTTCCTGTAACAGAAACTCTTTCCCGGTTTAAACCGGCTTTGTTTTCAGCAAACCCGGGTCTCTGCGGTGAGATTATTCACAAACAATGTGCTCATCGTTCTAGATTCTTCGGTTCTTCAAACGCCACTGCACCGTTGAGTCAAAGCGAGGAATCACAAGGAATCGTGGTGGTTCCATCTACTTCAAAGAACAAGAAGAATCATAAGAAAACCGGTTTGATTCTCGGTTTCACCGTCACTGTTGCGATTATCGCTGTTTTTTCAGTTATTGTAATTGCATTGATCAAAAAGCAGAACACCGGAGGAAAATCCAAGTCGCCGGAAACGGAAACGGAAACTCCACCGGCGGCGGTAATGGAAGTGAGAACTGTAGTTGAAACGGATACGAAGGTGAAGAAGATGGAGGAAGCTCACCGGAGTGGGAAGTTAGTGTTCTGCTGTGGGGAGGTGCAGGATTATACGCTGGAGCAGCTGATGAGAGCTTCGGCGGAGCTTTTGGGAAGAGGGAGTGTGGGGACCACTTATAAGGCGGTGATGGATTCGCAGTTGATATTGACTGTGAAGAGATTGGACGCCGGAAAAACCGGTGTGACGAGTGGGGAGGTTTTTCAGAAGCATATGGAGATTGTTGGTAGACTTCGTCATCCTAATTTGGTTACTTTGAAGGCTTTTTTTCAAGCTAAAGGAGAGAGGCTTGTTATCTATGATTATCAACCTAATGGAAGTCTCTTCAATCTGATTCATGGTTCAAGATCGGCGAGAGCGAAGCCACTGCATTGGACATCATGCTTAAAAATAGCAGAAGATGTAGCTCATGGACTTGCTTATATACATCAAGTTTCGTCTTTGATTCATGGCAACCTAAAATCCTCTAATGTCCTTCTTGGAGGTGACTTTGAAGCTTGTGTAACCGACTACTGTTTGGCCGTCCTTACAGATTCTTCATTTACAGAAGATCCTGATGTTGTAGCCTATAAAGCACCAGAGGTTCGAAAATCTAACCGTAGGGCGACTTCAAAGTCTGATGTGTATGCTTTTGGTGTGTTGCTGTTGGAGCTTTTGACAGGTAAACATCCTTCCAAACACCCTTTCCTTGCGCCAACGGATTTGCAAGATTGGGTTAAAGCAATGAGGGACGATGATTTTAGCGAAGATAACCGGCTAGAAATGCTCACCGAGGTTGCCAGTATTTGCAGTGCAACTTCCCCCGAGCAGAGGCCAGCTATGTGGCAAGTTCTTAAGATGATACAAGGAATAAAAGATAGTGTTTCAATGGAGGACATTGCACCCACTGGACTTTCATAG 1899 0.4339 MNSLITLFYLFFYFTFSSSTNSTLHQDAVSLLSFKQNADQNNKLLYTLNEPYDYCEWQGVKCAQGRVVRYVVQGLNLHGFFSPNTLTQLDQLRVMSLRNNSLFGPIPDLSPLINLKSLFLDHNNFSASFPPSIVFLHRLTTLSLSHNNFTGLLPVQLTLLDRLIILRLDSNSFTGSLPPLNQTDLKIFNISANNFTGPVPVTETLSRFKPALFSANPGLCGEIIHKQCAHRSRFFGSSNATAPLSQSEESQGIVVVPSTSKNKKNHKKTGLILGFTVTVAIIAVFSVIVIALIKKQNTGGKSKSPETETETPPAAVMEVRTVVETDTKVKKMEEAHRSGKLVFCCGEVQDYTLEQLMRASAELLGRGSVGTTYKAVMDSQLILTVKRLDAGKTGVTSGEVFQKHMEIVGRLRHPNLVTLKAFFQAKGERLVIYDYQPNGSLFNLIHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGGDFEACVTDYCLAVLTDSSFTEDPDVVAYKAPEVRKSNRRATSKSDVYAFGVLLLELLTGKHPSKHPFLAPTDLQDWVKAMRDDDFSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDIAPTGLS* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4013 632 Gene3D Phosphorylase Kinase; domain 1 323 435 - -
Tpr4g4013 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 628 - -
Tpr4g4013 632 SUPERFAMILY Protein kinase-like (PK-like) 362 619 IPR011009 -
Tpr4g4013 632 SUPERFAMILY L domain-like 25 221 - -
Tpr4g4013 632 PANTHER LRR RECEPTOR-LIKE KINASE 4 628 - -
Tpr4g4013 632 Gene3D Ribonuclease Inhibitor 24 181 IPR032675 -
Tpr4g4013 632 ProSiteProfiles Protein kinase domain profile. 358 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4013 632 Pfam Protein kinase domain 361 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4013 632 Gene3D Transferase(Phosphotransferase) domain 1 437 627 - -
Tpr4g4013 632 SMART serkin_6 358 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4013 632 Gene3D Ribonuclease Inhibitor 182 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4013 Tpr-Chr4 46709865 46713917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4013 21 625 Receptor kinase-like Gene Family AT3G50230 54.416 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g4013 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4013 - - gmx:100783086 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4013 4 46709865 46713917 Tpr4g4013 4 46709865 46713917 ECH