Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4007 ATGGCCGTGGAACTCATGACAGGTTACAACAACAACAACAACAGAACCGAAACTTTCACAAGCATAGCCGAAGAAAATGCTGTCCAAGAAGCAGCGTCTGGTTTAGAAAGCGTTGAAAAACTCATCAAATTACTCTCACAAGCACGCCATCAATACCAACCTTCAAATCCCAACAACAACAACAACCCTTCCATGGATATTGAAAGAGATTGCAACGCTTTTGCAGACATAGCTGTTTCCAAATTCAAACGTGTTATCTCACTTCTTGAAAAAACCAGAACCGGTCATGCTCGTTTCAGAAAAGCACCTTTACCACAAACTCAACAGATTCAAATTTCTGAAACACCAATCTTCAACGCTACACCTTTACAACAAATTCCACCACAACCACCAACAACAACAAATCTTCACCGTTCTGTAATCCAAAGAAAAGATTCATCAAAAACCCTTAATTTTTCATACTCCTCTGCTGCTAATTCTTTCATTTCATCACTCACCGGCGGTGGCGGCGACACCGATATCAAACAACAACCCTCATCATCATCACCGGCTGGAGCTTTTCAGATAACAAATCTTTCTCAAGTTTCATCTGTTGGTAAGCCACCACTTTCATCTTCTTCATTGAAAAGAAAGTGTAGCTCTGAAACTTTGGGTTCTGGAAAGTGTGGTAGTTCATCTAGCCGTTGTCATTGTTCCAAAAAGAGGAAAATGAGATTGAAAAGGGTTGTTAGGGTTCCTGCAATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGTCAAAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGATGTCCAGCAAGAAAACATGTAGAGAGAGCTCTTGATGATGCATCTATGTTGGTAGTTACATATGAAGGAGAACACAATCACTCACTTTCTGCAGCTGATGCTACTAATCTCATTTTAGAATCATCATAA 990 0.401 MAVELMTGYNNNNNRTETFTSIAEENAVQEAASGLESVEKLIKLLSQARHQYQPSNPNNNNNPSMDIERDCNAFADIAVSKFKRVISLLEKTRTGHARFRKAPLPQTQQIQISETPIFNATPLQQIPPQPPTTTNLHRSVIQRKDSSKTLNFSYSSAANSFISSLTGGGGDTDIKQQPSSSSPAGAFQITNLSQVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADATNLILESS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4007 329 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g4007 329 Gene3D WRKY domain 244 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g4007 329 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 19 329 - -
Tpr4g4007 329 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g4007 329 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 329 IPR044810 GO:0003700
Tpr4g4007 329 Pfam Plant zinc cluster domain 209 254 IPR018872 -
Tpr4g4007 329 SUPERFAMILY WRKY DNA-binding domain 253 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g4007 329 Pfam WRKY DNA -binding domain 258 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4007 Tpr-Chr4 46615978 46618005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4007 22 314 WRKY Transcription Factor Family AT2G24570 42.593 5.74e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g4007 WRKY 9.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4007 - - gmx:100170685 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4007 4 46615978 46618005 Tpr4g4007 4 46615978 46618005 ECH
Tpr4g4007 4 46615978 46618005 Tpr2g5739 2 66576581 66578859 PCT