Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3997 ATGAACAACTTCACCACCACAACCCTTTCTCTTCTTCTCACACTCTTAACACTAACCCTTAACCAATCTTTTTCCCTCTCTAACGACGGCGTTTTGTTACTCTCTTTCAAATACGCTGTTCTCAACGACCCTTTATCAATCCTTTCAAATTGGAACTACACCGACCAAACACCATGTTCATGGAACGGGGTTTCATGTTCCAACGTTGTAACAACAACAAACACAAAAAATGATACACCATTTCGTGTTACTGCTTTATCACTACCAAATTCTCAGCTTACATGTTCTATTCCCTCTGATCTTGGTTCCATTGAACATCTTCAAATTCTTGATCTTTCTAACAATTCCATTAATGGGTCTCTTCCTTCTTCTTTTTTTCAACCAAATTCCAACCTTCGTTTTCTTAATTTTTCAAACAATTTAATAACAGGGGAAGTTCCAGAGTCTTTAACAGACCTTAAAAATCTTCAATTTCTTAACTTTTCCGACAATGCTCTCACCGGAAAACTACCCAACAATCTCTCAAACATGCAAAACTTAACCGTTGCTTTGTTTAAAAACAATTACCTCACCGGTTTTCTTCCTAAAGATTTACGAACTTTACAGATTTTGGATCTGTCTTCAAATTTGTTGAATGGAACTTTAAGTCCAGATTTTGGTGGTGACAATATTCGTTACTTGAATGTTTCTTACAACAGATTTTCCGGTGAAATTCCACCGGAGTTCGCCGAGAAAATTCCAATTCACGCCACCATTGATCTCTCGTTTAATAATCTCACCGGAGAAATACCGGATTCCCCTGTTTTGTTGAACCAAGAAACAAATTTTTTCTCTGGTAACAGTGATCTATGTGGAGAACCAATGAAAAATCCATGTTCTATTCCTTCTTCTCCATCTTCTGAACCTAAAGATTCTTCTCCTCCTGCAATCGCCGCAATGCCGAAGAGTTTCACCGATTCTCCTCTATCACAACCAGCAGAGTCGAAAAAACAGAGTGGTTTGAGAAAAGGAACGATTATTGGAATCGTGATTGGAGATTTCGTTGGAATTGGAATCTTAGCTATGGTTTTTGTTTACGTTTACAAGTTAAAGAGAAAAAAAGATGAAGAAAAAGCAACAAAAAACGAAACTAATACTACAAGAAGTGAAAGTTCTTCTTCAACATTAGAAACAAAAGGTTTCACGAGATGGTCGTGTTTAAGAAAAAGAACAGAAGATGAAGAATCCTCGGAGACACCGAGTTCATCTGACAGTGACGTGGAAGCAGCACCGCGAAATGCGGAAGGTGTTGAAAATCAAAAGCAAGGAGAAAACAAAACCGGGTCGGGTTCGGGTTCCGGTTCCAGTTCGGGTACTCTTGTTACTGTTGATGGTGAAAGAGAACTTGAAGTTGAAACGCTTTTGAAAGCTTCTGCTTATATTTTAGGTGCTACTGGTTCAAGTATAATGTATAAAGCTGTTCTTGAAGATGGAACTTCTTTGGCGGTTCGGAGAATTGGTGAAAGTGGTGTTGAACGGTTCAAGGATTTTGAGAATCAGGTTCGGGTTATAGCGAAACTGGTTCATCCAAATTTGGTTCGGGTTCGTGGGTTTTATTGGGGTCATGATGAGAAACTCATTATCTATGACTTTGTTCCTAATGGTTGCCTTGCCAATGTTCGTTACAGGAAAGTGGGGTCTTCACCTAGCCATATACCGTGGGAAATACGGCTCAAGATAGCAAAAGGGGTGGCACGTGGGCTTACTTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCCACAAATATTCTATTGGGTAATGACATGGAGCCCAAAATTGGAGACTTTGGGCTTGAGAGAATAGTAACGGGTGACACAAGTTATAATAAGGCTGGTGGGTCGGCCCGTATATTTGGTAGCAAGAGATCAACAACCTCACGTGATAGTTTTCAAGATATTTCATTTGGGCCTAGCCCAAGCCCAAGTCCAAGTTATATAGGTGGTGTATCTCCTTATCATGCTCCTGAATCGCTTAGGAATTTAAAACCACATCCAAAGTGGGATGTGTATTCTTTTGGGGTCATGTTTCTTGAGCTTTTAACGGGGAAGATTGTGGTTTTGGATGATTTGGGCCAAGGGCCCGCGGTTATCGTTGAGGATAAGAATCGGGCTTTGAGGATGGTTGATGTGGCAATCCGTGCTGACATGGAAGGTAAAGAAGAGGCTTTGTTGGCTTATTTTAAGTTAGGGTATAGTTGTGTGACTAATGTTCCTCAAAAAAGGCCACAAATGAAAGAAGTGTTACAAGTACTTGAAAAAATACCATCTACATTGTCGTATTATTATAGTCACTGA 2343 0.3991 MNNFTTTTLSLLLTLLTLTLNQSFSLSNDGVLLLSFKYAVLNDPLSILSNWNYTDQTPCSWNGVSCSNVVTTTNTKNDTPFRVTALSLPNSQLTCSIPSDLGSIEHLQILDLSNNSINGSLPSSFFQPNSNLRFLNFSNNLITGEVPESLTDLKNLQFLNFSDNALTGKLPNNLSNMQNLTVALFKNNYLTGFLPKDLRTLQILDLSSNLLNGTLSPDFGGDNIRYLNVSYNRFSGEIPPEFAEKIPIHATIDLSFNNLTGEIPDSPVLLNQETNFFSGNSDLCGEPMKNPCSIPSSPSSEPKDSSPPAIAAMPKSFTDSPLSQPAESKKQSGLRKGTIIGIVIGDFVGIGILAMVFVYVYKLKRKKDEEKATKNETNTTRSESSSSTLETKGFTRWSCLRKRTEDEESSETPSSSDSDVEAAPRNAEGVENQKQGENKTGSGSGSGSSSGTLVTVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHIPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYNKAGGSARIFGSKRSTTSRDSFQDISFGPSPSPSPSYIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDLGQGPAVIVEDKNRALRMVDVAIRADMEGKEEALLAYFKLGYSCVTNVPQKRPQMKEVLQVLEKIPSTLSYYYSH* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3997 780 SUPERFAMILY Protein kinase-like (PK-like) 474 773 IPR011009 -
Tpr4g3997 780 Gene3D Phosphorylase Kinase; domain 1 453 544 - -
Tpr4g3997 780 Pfam Protein kinase domain 475 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3997 780 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Tpr4g3997 780 PRINTS Leucine-rich repeat signature 107 120 - -
Tpr4g3997 780 PRINTS Leucine-rich repeat signature 198 211 - -
Tpr4g3997 780 PANTHER BNAC07G16060D PROTEIN 13 773 - -
Tpr4g3997 780 Gene3D Ribonuclease Inhibitor 27 197 IPR032675 -
Tpr4g3997 780 SMART LRR_typ_2 104 128 IPR003591 -
Tpr4g3997 780 SMART LRR_typ_2 198 221 IPR003591 -
Tpr4g3997 780 SMART LRR_typ_2 153 177 IPR003591 -
Tpr4g3997 780 Gene3D Transferase(Phosphotransferase) domain 1 546 776 - -
Tpr4g3997 780 ProSiteProfiles Leucine-rich repeat profile. 106 128 IPR001611 GO:0005515
Tpr4g3997 780 SUPERFAMILY L domain-like 30 288 - -
Tpr4g3997 780 MobiDBLite consensus disorder prediction 378 394 - -
Tpr4g3997 780 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 773 - -
Tpr4g3997 780 MobiDBLite consensus disorder prediction 431 453 - -
Tpr4g3997 780 Pfam Leucine rich repeat 106 166 IPR001611 GO:0005515
Tpr4g3997 780 Gene3D Ribonuclease Inhibitor 198 294 IPR032675 -
Tpr4g3997 780 MobiDBLite consensus disorder prediction 368 453 - -
Tpr4g3997 780 MobiDBLite consensus disorder prediction 396 410 - -
Tpr4g3997 780 ProSiteProfiles Protein kinase domain profile. 469 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3997 Tpr-Chr4 46496915 46500213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3997 9 780 Receptor kinase-like Gene Family AT4G37250 56.375 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g3997 Pkinase 2.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3997 - - gmx:100784503 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3997 4 46496915 46500213 Tpr4g3997 4 46496915 46500213 ECH