Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3988 ATGAATTGCAATCATCAATATCATCATAGCTTAAAAAATCATCAAACTAACACAATTTCCTCTCTCACTCTCACCATGGCAACTCATCACCACCACAAAATTCAACACACTATATTTCTACTTGCTGCTTTTCTTCTTCAATTCTCATCACTACAAGTCCCCTCACTTGCATATGATCCTCAAGACATATACTTCATCAAATGCGGCTCAAATAACGACGTTACGGTTGACCAAAGTAATAACAAAGTTTATATTGGTGAATCAAACCATAATTACCCTAAACCAAATTTCAGCAATAGCTACACAGAAACCAATCAATCAATCGTGCCTTCACCTCTCTACCAAACAGTAAGAATTTTCCGTTCCGAATCTTCGTACAAATTCATTACCATCCCAAACAACACCTACATGGTACGTTTCCATTTCTTTTCATTCTCTTCAGCAAGTAACCTTTACAAAGCAAAATTCAACATTTCCGTTTCTGGTTTCTCTCTGTTGCAAAATTTTGACGCTGAAAACACCACCAACACTGTTGTAATAAAAGAATATTTCGTTAAAATCATCGGAAATAGATTCAAAATAAAGTTCACACCCCAAAACTCATCATTTGCGTTTGTTAATGCCATAGAGCTCTTTATGCTCCCCATTCATTTAATCCCCGATTCAATCCAGCGATTCAATTACTCCGGTTCTGCTGGTCTAAGCTTATCTAATTACACTGGCGGCTTACACTCAAGAGCTTTGGAAACTAAACACCGTCTTAACGTTGGTGGTGAAGCTGTCGATAGAATATCCGATAACTTAATGAGAGAATGGTTACCAGATGACAGTTATATAACTGATCCACAAAACGCTAAGAATAGTACTTTTGGAGGTACAATTAAACGCAATGCAGATGATGAATCTGATGGTCGATATTCAAATAAATATACTGCTCCCGATGTTGTTTATCAAACTGCCAAAGAGAGTAAAAACGGTTCTAACGGTTTAAGTATAAGTTGGAGTGTTCCTGTGGAGAAGAATACAGATCATTTCCTTAGGCTTCACTTTTGTGACATTTTTAATCCACAGAGTCTACTTACAACCTTCATTCTCAACATTTATGACCAGCCTGTTATTACTGTAAATGATGGCGCAGATGTGTCTTCTGCTTATTATTATGATTTTGTGGTTCGTTCAGATGGTTCTGGACTATTGAAAGTTAGCGTGGTACCTAATATGACGGTTGATAATCAACTGGTTGCTAAACCGAACGCTTTTCTAAACGGGCTAGAACTGATGAAAGTGATAGAATTGTCTGGTTCAATTCCCTTATATGATTCGGATTCCAATTCGAAGAAGATTAGTCTTCCTGTGGTGGTGGGTTCGGTCGTTGGAGGTTTTGTTTTGGTTTCTGTAGTGGTGGTTTTGTTTATTTGGATCTGTAAATACAGGAAACAAAAGCCTGTTGAGAATTACAAATGGTTGCCAACTCGAGCTTCTGCAGGAGGGAGTTCTCACGGCAGATTAGCTGATAATATTAACCTTGGATTGAAAATCTCCTTGCGTGATCTACAATTGGCAACGGAGAATTTCAATGCGAAGAGGGTAATTGGAAAAGGTGGTTTTGGAAATGTTTACAAGGGAGTTCTCAAGAATGGAATGAGTGTTGCAGTGAAAAGAAGTGAGCAAGAGTCAGGTCAAGGATTTCCTGAGTTTGAAGCTGAGATAATGGTTTTGTCCAAGATTCGTCACAGACACCTTGTTTCCTTAATCGGTTATTGTGATGAAAGGTATGAGATGATACTTGTTTATGAGTACATGGAAAAAGGGACACTTAGAGACAGCTTGTATAGTACAAATTTGCATAGTTTTTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTCTTCATTATCTTCACAAAGGAGCAGCTGGTGGAATCATTCACCGTGATGTGAAATCCACAAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAACTGGTCCTCTAGATCAGCATTCTTATGTCAGCACAGGTGTTAAAGGAACTTTCGGGTACCTTGATCCCGAGTACTTTCAGTCACAACAGCTTACTGAAAAGTCTGATGTTTATTCATTCGGTGTGGTTTTACTCGAAGTGTTATGTGCAAGACCAGCCATTGACCCGTCGCTTCCAAGGGATCAGGTGAACTTGGCTCAGTGGGGAATATTTTGTAAAGACAAAGGGATACTTGAAGACATCGTTGATCCTTCCATCAAGGGACAAATTAATCCAAACTCACTTAGAAAGTTTAGTGAGACGGTGGATAAATGCTTACAGGATGATGGCTGTGATCGGCCATCAATGGGTGATGTGTTGTGGGACTTGGAATATGCTTTGCAGCTTCAAAAAGGCATAATACGTAGAGAACCACATGAGGATAGTTCTACCAATGCTTCTGGATCAATTCAATTGCCTAATATTCGCCGTTTACCTTCTCTGTCTACAATGACTGAAATGGATGATATGTCTATTGGGATGCTTAATGTTGAATCAAATAGTTCAGCAGATCCTGTTTTCTCTCAGTTGAAAATTGAGGATGCTAGATAG 2610 0.3877 MNCNHQYHHSLKNHQTNTISSLTLTMATHHHHKIQHTIFLLAAFLLQFSSLQVPSLAYDPQDIYFIKCGSNNDVTVDQSNNKVYIGESNHNYPKPNFSNSYTETNQSIVPSPLYQTVRIFRSESSYKFITIPNNTYMVRFHFFSFSSASNLYKAKFNISVSGFSLLQNFDAENTTNTVVIKEYFVKIIGNRFKIKFTPQNSSFAFVNAIELFMLPIHLIPDSIQRFNYSGSAGLSLSNYTGGLHSRALETKHRLNVGGEAVDRISDNLMREWLPDDSYITDPQNAKNSTFGGTIKRNADDESDGRYSNKYTAPDVVYQTAKESKNGSNGLSISWSVPVEKNTDHFLRLHFCDIFNPQSLLTTFILNIYDQPVITVNDGADVSSAYYYDFVVRSDGSGLLKVSVVPNMTVDNQLVAKPNAFLNGLELMKVIELSGSIPLYDSDSNSKKISLPVVVGSVVGGFVLVSVVVVLFIWICKYRKQKPVENYKWLPTRASAGGSSHGRLADNINLGLKISLRDLQLATENFNAKRVIGKGGFGNVYKGVLKNGMSVAVKRSEQESGQGFPEFEAEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDSLYSTNLHSFLTWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQHSYVSTGVKGTFGYLDPEYFQSQQLTEKSDVYSFGVVLLEVLCARPAIDPSLPRDQVNLAQWGIFCKDKGILEDIVDPSIKGQINPNSLRKFSETVDKCLQDDGCDRPSMGDVLWDLEYALQLQKGIIRREPHEDSSTNASGSIQLPNIRRLPSLSTMTEMDDMSIGMLNVESNSSADPVFSQLKIEDAR* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3988 869 SUPERFAMILY Protein kinase-like (PK-like) 512 794 IPR011009 -
Tpr4g3988 869 Gene3D Phosphorylase Kinase; domain 1 498 600 - -
Tpr4g3988 869 PANTHER OS07G0166700 PROTEIN 55 829 IPR045272 GO:0004714|GO:0006468
Tpr4g3988 869 CDD STKc_IRAK 531 797 - -
Tpr4g3988 869 Gene3D - 247 430 - -
Tpr4g3988 869 Gene3D - 61 214 - -
Tpr4g3988 869 Pfam Malectin-like domain 66 429 IPR024788 -
Tpr4g3988 869 PANTHER BNAC03G27170D PROTEIN 55 829 - -
Tpr4g3988 869 ProSiteProfiles Protein kinase domain profile. 525 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3988 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Tpr4g3988 869 SMART serkin_6 525 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3988 869 Gene3D Transferase(Phosphotransferase) domain 1 601 818 - -
Tpr4g3988 869 Pfam Protein tyrosine and serine/threonine kinase 527 793 IPR001245 GO:0004672|GO:0006468
Tpr4g3988 869 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3988 Tpr-Chr4 46360884 46364014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3988 38 869 Receptor kinase-like Gene Family AT2G23200 44.009 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr4g3988 Malectin_like 1.1e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3988 - - mtr:MTR_4g095012 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3988 4 46360884 46364014 Tpr4g3988 4 46360884 46364014 ECH