Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3987 ATGCCAACTTTTCACCTCCACAAAATTCAACACTCTATCTTTCTACTTGTTACTTTTCTTCTTCAATTCTCATCACTACACTTCCTCTCACTTGGATATGTTCACCAAAACACATACTTCATCAATTGCGGATCAGATATCCCAGTTACTGAAAATAACAACGTTTATATTGGTGAATTAAACAGTAATTACCCTAAAAAAAGTTTCAGCAGCAATAGTTACTCAGAAAGCAATCAATCAACAGTGCCTTCACCTCTCTACCAAACTGCAAGAATTTTTCATTCTGAATCTTCCTATGAATTTACTACTGAACCAAACAACACCTACATGGTACGTTTACACTTCTTTTCATTCTCTTCACCGATTAACCTTTACACTGCAAAATTCAACGTTTCTGTTCCTGGTTTCTCTCTGTTACAAAATTTCGACGCAAAAAACACTACAAACCCCGGCTTAATAAAAGAGTATTTCGTTAAAATCATCAGAAAAAGATTCAAAATCACTTTCACACCTCAAAATTCATCATTCGCGTTTGTTAATGCCATAGAACTCTTTATGCTCCCAACTCATTTGATCCCTGGTTCAATAGCACGATTCAGTTACACCGGTTCTACTGGTCGAGGCTTAACTACTTATAGTCACGATTTCCTCTCACGAGCTTTGGAAACCAAACACCGTCTTAACGTCGGGGGCGAAAACGTCACTAGACAAACCGATAACTTATCGAGAGAATGGTTGCCAGATGACAGCTATATAACTGATCCACAAAACGCTAAGGATAGTCCCTTTTTTGGAGGTACAATTAAACGCAATGCAGATGATGAATCTGATGGTTTACATTCAGATCAATATACTGCTCCAGATGTTGTTTATCAAACTGCCAAAGAGAGTAAAAACGGTTCCAACGGTTTAAGTATAAGTTGGAGTGTTCCCGTGGAGAAGAATACAGATCATTTCCTCAGGCTTCACTTTTGTGACATTTTTAACCAACAGAGTTTACTTACACTTTTCATTCTCAACATTTATGACCAGCCTGTTATTACTGTAAATGGTGGTGCAGATGTGTCTTCTGCTTATTATTATGATTTTGTGGTTCGTTCCGATGGCTCTGGACTATTGAATGTTAGTGTGGCACCTAATACAACGGCTGCTAAACCAAATGCATTTTTAAACGGTCTAGAACTAATGAAAGTGATTGAATCATTGGGTTTGATTCCCTTAGATGATTCGGATTCCAATTCGAAGAAGATTAGTCTTCCTGTGGTGGTGGGTTCGGTCGTTGGAGGTTTAGTTTTGGTTTCTATTGTGGTGGTTTTGTTTCTTTGGGTTAGCAAAATCAGGAAACAAAAGCCTGTTGAGAATTCAGAATGGTTGCCAGTTCGAGCTACCGCAGGAGGGAGTTCTCACAGCAGATTAACTGATGGAACAACAATTCAAGGCTCACCTCTACCTAACATTAACCTTGGATTGAAACTCTCCTTGCTTGATCTACAGTTCGCGACAGAGAATTTCGATGCGAAGAGGATAATTGGAAAGGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGACGGTTGCAGTGAAAAGAAGTGAGCCAGGGTCGGGTCAAGGACTACCTGAATTTCAAGCTGAGATAATGGTTTTGTCTAAGATTCGTCACAGACACCTTGTTTCCTTAATTGGATATTGTGATGAAAGGTATGAGATGATACTTGTTTATGAGTACATGGAAAAAGGGACGCTTAGAGACAGCTTGTACAGTACAAATTTGACTAATTTTTTGACTTGGAAGCAAAGGCTTGAGATTTGTATTGGGGCTGCGAGAGGTCTTCATTACCTACACAAAGGTGCAGCTGGTGGAATCATTCACCGTGACGTGAAATCTACAAACATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGAAGTGGTCCTCTTGATCAGCATTCTTATGTCAGCACAGGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGAGTACTTTAGATCACAACAGCTTACAGAAAAATCTGATGTTTATTCATTTGGTGTGGTTCTACTCGAAGTGTTGTGTGCGAGAACAGCCATTGACCCGTCGCTTCCAAGGGAACAGGTGAACTTGGCTGAGTGGGGAATATTTTGCAAAGACAAAGGGATACTTGAAGACATCATTGATCCTTCCATCAAGGGACAAATTGAACCAAACTCACTTAGAAAGTTTAGTGAGACAGTGGATAAATGCTTACAAGATGATGGCTCTGATCGGCCATCAATGGGCGATGTGTTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGGTGCAGTACATAGAGAACCACATGAGGATAGTTCTAGCAGTGCTTCTGTATCAATTCAATTGCCTAATGTTCGCCGTTTACCTTCTCTGTCTACACTGACTGAAATGGATGATATGTCTATTGGGATGGTTAATGATGAATCAAATAGTGCAGAAGATTCAGTTTTCTCTCAGTTGAAAATTGATGATGCTAGATAG 2547 0.395 MPTFHLHKIQHSIFLLVTFLLQFSSLHFLSLGYVHQNTYFINCGSDIPVTENNNVYIGELNSNYPKKSFSSNSYSESNQSTVPSPLYQTARIFHSESSYEFTTEPNNTYMVRLHFFSFSSPINLYTAKFNVSVPGFSLLQNFDAKNTTNPGLIKEYFVKIIRKRFKITFTPQNSSFAFVNAIELFMLPTHLIPGSIARFSYTGSTGRGLTTYSHDFLSRALETKHRLNVGGENVTRQTDNLSREWLPDDSYITDPQNAKDSPFFGGTIKRNADDESDGLHSDQYTAPDVVYQTAKESKNGSNGLSISWSVPVEKNTDHFLRLHFCDIFNQQSLLTLFILNIYDQPVITVNGGADVSSAYYYDFVVRSDGSGLLNVSVAPNTTAAKPNAFLNGLELMKVIESLGLIPLDDSDSNSKKISLPVVVGSVVGGLVLVSIVVVLFLWVSKIRKQKPVENSEWLPVRATAGGSSHSRLTDGTTIQGSPLPNINLGLKLSLLDLQFATENFDAKRIIGKGGFGNVYKGVLKNGMTVAVKRSEPGSGQGLPEFQAEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDSLYSTNLTNFLTWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDQHSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARTAIDPSLPREQVNLAEWGIFCKDKGILEDIIDPSIKGQIEPNSLRKFSETVDKCLQDDGSDRPSMGDVLWDLEYALQLQRGAVHREPHEDSSSSASVSIQLPNVRRLPSLSTLTEMDDMSIGMVNDESNSAEDSVFSQLKIDDAR* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3987 848 Gene3D Transferase(Phosphotransferase) domain 1 580 799 - -
Tpr4g3987 848 MobiDBLite consensus disorder prediction 827 848 - -
Tpr4g3987 848 SUPERFAMILY Protein kinase-like (PK-like) 492 773 IPR011009 -
Tpr4g3987 848 ProSiteProfiles Protein kinase domain profile. 504 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3987 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Tpr4g3987 848 Gene3D Phosphorylase Kinase; domain 1 471 579 - -
Tpr4g3987 848 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Tpr4g3987 848 Pfam Malectin-like domain 75 398 IPR024788 -
Tpr4g3987 848 CDD STKc_IRAK 510 776 - -
Tpr4g3987 848 PANTHER BNAC03G27170D PROTEIN 30 809 - -
Tpr4g3987 848 PANTHER OS07G0166700 PROTEIN 30 809 IPR045272 GO:0004714|GO:0006468
Tpr4g3987 848 SMART serkin_6 504 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3987 848 Pfam Protein tyrosine and serine/threonine kinase 507 772 IPR001245 GO:0004672|GO:0006468
Tpr4g3987 848 Gene3D - 34 187 - -
Tpr4g3987 848 Gene3D - 220 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3987 Tpr-Chr4 46351698 46354781 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3987 10 848 Receptor kinase-like Gene Family AT2G23200 44.571 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr4g3987 Malectin_like 8.9e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3987 - - mtr:MTR_4g095012 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3987 4 46351698 46354781 Tpr4g3987 4 46351698 46354781 ECH