Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3981 ATGGTCTTCCTTAAGGAGAGCAAAGACAATAAAGCCTCAAACAATAAACAAAATCTTGATAACATAGGAGAATGGTTGAGTTTAGGAATCAAACAACAAATGTCTATGAAAAAAGCTCATCATAACCAAAATGCTCAATCATCAAAACCTCTTCACAAAAAGACATACTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCTTAGGGGGACACCAAAATGCACACAAAAGGGAAAGAGAAGCTGCTAGAAAACTCCAACTATCTCATAATTCTTTGGTGGCAAGGTCACTAGGAATCAAACCTCACTCTCTTGTGCACAAACAAAGCAGAGAAAGAGATGCTACTATGGTGGCTCAATTCAATGTTAATGCTGCAAGTTCTAGAATTGGAATGGCATGGACACCCTTTGTTCTTGAACATGCTGTTGATTCTGTATGGCATGGAAGCTTTAGGAAGGACTTGCCAAAGCAAGAAGATATACATAATAAGCTGGACTTAGATCTTAGGCTTTGA 522 0.3831 MVFLKESKDNKASNNKQNLDNIGEWLSLGIKQQMSMKKAHHNQNAQSSKPLHKKTYSCNFCMRKFYSSQALGGHQNAHKREREAARKLQLSHNSLVARSLGIKPHSLVHKQSRERDATMVAQFNVNAASSRIGMAWTPFVLEHAVDSVWHGSFRKDLPKQEDIHNKLDLDLRL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3981 173 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 173 - -
Tpr4g3981 173 Gene3D Classic Zinc Finger 30 118 - -
Tpr4g3981 173 PANTHER ZINC FINGER PROTEIN 4-LIKE 6 173 - -
Tpr4g3981 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Tpr4g3981 173 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Tpr4g3981 173 SUPERFAMILY beta-beta-alpha zinc fingers 52 83 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3981 Tpr-Chr4 46259883 46260473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3981 51 155 C2H2 Transcription Factor Family AT1G66140 34.483 9.66e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3981 - - gmx:100795890 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3981 4 46259883 46260473 Tpr4g3981 4 46259883 46260473 ECH