Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3972 ATGAAGTTCTCTTTTCCTGTATTTCTTTTGGTTTTGTTAATGGGTCTATGTGATGCATCTTCTTTGAAGAGCACTTACATAGTGCACGTTGCAAAATCTGAAATGCCAGAGAGTTTCGAGCACCATGCTTTATGGTATGAGTCTTCTTTACAATCTGTATCTGAATCAGCTGAAATGATGTACACTTATGAAAACGCGATTCATGGTTTCTCAACCAGATTAACTGATGAAGAAGCGCGTTTGCTTGAGAGCCAAACGGGGATTCTAGCTGTTTGGCCTGAAGTGAAATATGAACTTCATACAACAAGAACTCCTCAGTTTCTTGGCCTCGATAAATCCGCCGACATGTTGTTCCCTGCATCAAGCACAGGAAGCGATGTTGTCGTCGGTGTTCTCGATACCGGTGTTTGGCCGGAAAGTAAAAGCTTCGACGACACTGGATTTGGTCCTATACCCACAACATGGAAAGGCGCGTGTGAATCGGGTACAAACTTCACAGCTTCAAACTGCAACAAAAAGCTCATCGGAGCAAGATATTTCGCAAAAGGTGCTGAAGCCATGTTAGGTCCTATCGACGAAACAACAGAGTCTAGATCTCCACGAGACGACGACGGTCACGGCACACACACCTCAACAACAGCAGCAGGATCAGTCGTTACAGGTGCAAGTCTCTTCGGTTACGCTTCCGGAACAGCGCGTGGGATGGCCACGCGCGCTAGAGTTGCTGCTTACAAAGTTTGTTGGAAAGGTGGTTGTTTCAGTTCCGATATTTTAGCAGCTATTGATAAAGCTATTTCAGACAATGTTAATGTTCTGTCACTTTCTCTCGGTGGTGGCATGTCTGATTATTACAGAGATAGTGTTGCTATTGGTGCTTTTGCTGCAATGGAGAAAGGGATTCTCGTTTCTTGCTCCGCTGGAAATGCTGGTCCTAGTGCTTATAGTTTATCTAATGTAGCTCCATGGATTACTACCGTGGGTGCTGGCACACTTGATCGTGATTTCCCTGCTTCTGTTAGTCTCGGTAACGGATTAAATTATTCCGGCGTGTCGCTTTATCGAGGCAACGCTTTGCCGGAATCTCCATTACCGTTGATTTATGCAGGGAATGCTACTAATGCTACCAATGGGAATTTATGTATGACTGGAACTTTATCGCCGGAGTTAGTTGCCGGGAAGATTGTTTTATGTGACCGTGGGATGAATGCTAGGGTACAGAAAGGAGCTGTTGTGAAAGCTGCCGGTGGATTGGGAATGGTGCTGAGTAACACGGCGGCGAACGGTGAAGAGCTGGTGGCGGATACTCATTTGTTACCGGCGACGGCAGTTGGTGAGAAAGAAGGTGATGCGATCAAGAAATATTTATTCTCCGATGCGAAATCGACGGTTAAGATTGTGTTTCAAGGAACAAAGGTGGGAGTGCAACCTTCTCCGGTTGTCGCGGCGTTTAGTTCACGTGGTCCCAACTCAATCACACCGCAGATCTTGAAACCTGATCTAATAGCGCCAGGTGTCAACATCTTAGCTGGGTGGTCAAAGGCAGTAGGTCCCACTGGTTTACCAGTTGATGAAAGACGCGTGGATTTCAATATTATCTCTGGTACATCCATGTCGTGTCCTCACGTGAGTGGTTTAGCCGCTTTGATTAAATCGGCTCATCCGGAATGGAGTCCAGCTGCTGTTAGATCGGCTCTTATGACAACGGCTTATACGGCTTACAAAAACGGTAACAAATTGCAAGATAGTGCAACTGGAAAAACCTCCACACCGTTTGATCATGGATCAGGACACGTGGATCCTATTGCTGCACTTAACCCTGGGTTGGTTTATGATTTAACTGTGGATGATTATTTAGGTTTTCTCTGTGCATTAAACTACACAGCAACGCAAATAACAGCTTTGGCAAGGAGAAAGTTCCAGTGTGACGCGGGTAAAAAGTACAGTGTGTCTGATCTTAATTACCCTTCATTTGCCGTTGTTTTTGATACAATGGGTGGGGTTAATACAGTTAAACACACGAGAACTCTTACAAACGTGGGACCCGCGGGAACTTACAAGGCTTCCGTGACGTCTGATTCAAAAGCTGTGAAAATAACGGTTGATCCTGAAGAGTTGAGTTTCAAGGAGAATGAGAAGAAACCGTTTACGGTAACGTTTACTTCTTCGGGTTCGACACCTCAGAAGGTGAATGGATTTGGAAGATTGGAATGGAGTAATGGGAAGAGTATTGTTGGAACTCCAATTTCAATTAGTTGGGATTGA 2262 0.4514 MKFSFPVFLLVLLMGLCDASSLKSTYIVHVAKSEMPESFEHHALWYESSLQSVSESAEMMYTYENAIHGFSTRLTDEEARLLESQTGILAVWPEVKYELHTTRTPQFLGLDKSADMLFPASSTGSDVVVGVLDTGVWPESKSFDDTGFGPIPTTWKGACESGTNFTASNCNKKLIGARYFAKGAEAMLGPIDETTESRSPRDDDGHGTHTSTTAAGSVVTGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAISDNVNVLSLSLGGGMSDYYRDSVAIGAFAAMEKGILVSCSAGNAGPSAYSLSNVAPWITTVGAGTLDRDFPASVSLGNGLNYSGVSLYRGNALPESPLPLIYAGNATNATNGNLCMTGTLSPELVAGKIVLCDRGMNARVQKGAVVKAAGGLGMVLSNTAANGEELVADTHLLPATAVGEKEGDAIKKYLFSDAKSTVKIVFQGTKVGVQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAVRSALMTTAYTAYKNGNKLQDSATGKTSTPFDHGSGHVDPIAALNPGLVYDLTVDDYLGFLCALNYTATQITALARRKFQCDAGKKYSVSDLNYPSFAVVFDTMGGVNTVKHTRTLTNVGPAGTYKASVTSDSKAVKITVDPEELSFKENEKKPFTVTFTSSGSTPQKVNGFGRLEWSNGKSIVGTPISISWD* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3972 753 Pfam PA domain 378 451 IPR003137 -
Tpr4g3972 753 Pfam Peptidase inhibitor I9 25 100 IPR010259 -
Tpr4g3972 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 751 IPR045051 -
Tpr4g3972 753 Gene3D - 332 473 - -
Tpr4g3972 753 Gene3D - 621 752 - -
Tpr4g3972 753 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 17 751 - -
Tpr4g3972 753 CDD PA_subtilisin_like 338 465 - -
Tpr4g3972 753 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Tpr4g3972 753 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Tpr4g3972 753 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Tpr4g3972 753 CDD Peptidases_S8_3 97 570 IPR034197 -
Tpr4g3972 753 SUPERFAMILY Subtilisin-like 99 608 IPR036852 GO:0004252|GO:0006508
Tpr4g3972 753 MobiDBLite consensus disorder prediction 191 212 - -
Tpr4g3972 753 Pfam Subtilase family 124 573 IPR000209 GO:0006508|GO:0008236
Tpr4g3972 753 Gene3D Peptidase S8/S53 domain 126 617 IPR036852 GO:0004252|GO:0006508
Tpr4g3972 753 Pfam Fibronectin type-III domain 651 750 IPR041469 -
Tpr4g3972 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 100 IPR037045 -
Tpr4g3972 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Tpr4g3972 753 ProSiteProfiles Serine proteases, subtilase domain profile. 96 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3972 Tpr-Chr4 46161166 46164167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3972 8 752 Subtilisin-like Serine Gene Family AT5G67360 72.897 0.0 1127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3972 - - gmx:100815413 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3972 4 46161166 46164167 Tpr4g3972 4 46161166 46164167 ECH
Tpr2g5708 2 66253911 66256707 Tpr4g3972 4 46161166 46164167 PCT