Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3964 ATGGCAATTCAGCACTGTATCTTTCTACTTGCTGCTTTTCTTCTTCAATTCTCATCACTACACTTCCCCTCACTCGCATATGATCCTAAAGGCATATACTTCATAAACTGCGGGTCAGATATCGAAGTTAATGAAAATAAAAATCTCTATATTGGTGAATCAAACCGTAATTACCCTAAAAAAAGTTTCAGCAGCAAAAATAGCTACACAGAAACCGATCAACTATCAGTGTCTTCCCCTCTCTACCAAACTGCAAGAATTTTCCATGCTGAATCTTCCTACGAATTCACTACCGTCCCAAACAACACCTACATGGTACGTTTCCATTTCTATTCATTCTCTTCACCGGTTAACCTTTACACTGCAAAATTCAACGTTTCCGTTCCAGGTTTCCCTCTCTTACAAAACTTCGATGCAAAAAACACCACAAACCCTGGCTTAATAAAAGAGTATTTCGTTAAAATCATCAGAAAAAGATTCAAAATCACTTTCACACCTCAAAATTCATCATTCGCGTTTGTTAATGCCATAGAACTCTTTATGCTCCCAACTCATTTGATCCCCGATTCAGTCGCGCGTTTCACTTACACTGGTTCTACTGGTAGAGGCTTATCTACTTATAGTGACAATTTCCTCTCACGAGCTTTGGAAACCAAACACCGTCTTAACGTCGGGGGCGAAAACGTCACTAGACAAACCGATAACTTATCGAGAGAATGGTTACCAGATGACAGCTATATAACTGATCCACAAAATGCTAAGGATAGTCCCTTTTTTGGAGGTACACTTAAACGCTATCCAGACGATGAATCTGATGGTCTATATTCAAATAAATATACTGCTCCAGATGTTGTTTATCAAACTGCAAAAGAGACTCTTAACGGTTCTAACAATATAAGTTGGAGTGTTCCTGTGGAGAAGAATACAGATCATTTCATTAGGCTTCACTTTTGTGACATTTTTAATCCACTTACAGACTTTGATCTCATCATTTATGACAATCTTGTTACTTCAAACGTAAATAATGACCCAGATGTGTCTTCTCCTTATTATTATGATTTTGTGGTTCATTCTGATGGCACTGGACTATTGAATGTTAGTGTGGTACCTAGTATAACATCTGCTATACCAAACGCCTTTTTAAACGGGCTAGAACTGATGAAAGTGATTGAATTGTCTGGTTCAATTCCCTTAGATGGTTTGGATTCCGAATCCAAGAAGAATATTAGTCTTCCTGTGGTGGTGGGTTCGGTCGTTGGAGGTTTAGTTTTGATTTCTGTTGTGATGGTTTTGTTTCTTTGGATTATTAAAATCAGGAAACAAAAGCCTGTTGAGAATTCAGATTTGTTGAAGATTCCAACTACTGCAGAAGGAATTTCTTATAGCAGATTACATTATGGCAAAATAACTCAAGGCTCATCTTTACCTAACTTAAACCTTGGCCTGAAAATCTCCTTGCTTGATCTTCAATTCGCAACAGAGAATTTTGATGTGAAGAAGATAATTGGAGTTGGTGGTTTTGGAAATGTTTATAAGGGAGTTCTCAAGAATGGAATGAGTGTTGCAGTGAAAAGAAGTGTAACAGGGTCCGATCAAGGATTTCCTGAATTTCGAACTGAGATAATGGTGTTGTCCAAGATTCGTCACATACACCTTGTTTCCTTAATAGGGTATTGTGATGAAAGAGATGAGATGATACTTGTTTATGAGTACATGGAAAAGGGGACACTTAGAGACAATTTGTACAATACAAATTTGCCTTGCTTGACATGGAAGCAACGACTTGATATTTGTATTGGTGCTGCTAAAGGTCTTCATTACCTTCACAAAGGAGTAGCTGGTGGAATCATTCACCGTGATGTGAAATCCACCAATATATTGCTTGATGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGGTCCTCTTGATCAAGATTCTTATGTCAGCACATGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGATTACTTTAGAACACAACATCTTACAGAAAAATCTGATGTATATTCTTTTGGGGTGGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCTATCGACCTATCTTGTCCAAGGGAACAAGTCAATTTGGCTGAGTGGGGATTGCTTTGCAAAGACAAAGGGACACTTGAAGAGATCATCGATCCTTCCATCACGAGACAAATTAATCAAAACTCACTTAGAATATTTAGTGAGACGGTGGAAAAATGCTTACAGGATTATAGTTGCGATAGGCCAACGATGGTTGATGTGTTGTGGGACTTGGAATATGCGTTACAACTTCAGATAGAACCACATGACGATAGCAGTGTTCAATTGCCTAATGTTCAACATATACCTTGTATGTCTACACTGATTGAAGTGGATGACATGTCTATTGGTAGGGTTGATGAATCTGAAACTACAACATCGATGATGCTAGATAGAATTTCATGTGAAGCTAATCAAGGTACAACAATCAACTCGCAAATGTCTCCACTGGAGAGTCATTTTTTTAGATAG 2535 0.3807 MAIQHCIFLLAAFLLQFSSLHFPSLAYDPKGIYFINCGSDIEVNENKNLYIGESNRNYPKKSFSSKNSYTETDQLSVSSPLYQTARIFHAESSYEFTTVPNNTYMVRFHFYSFSSPVNLYTAKFNVSVPGFPLLQNFDAKNTTNPGLIKEYFVKIIRKRFKITFTPQNSSFAFVNAIELFMLPTHLIPDSVARFTYTGSTGRGLSTYSDNFLSRALETKHRLNVGGENVTRQTDNLSREWLPDDSYITDPQNAKDSPFFGGTLKRYPDDESDGLYSNKYTAPDVVYQTAKETLNGSNNISWSVPVEKNTDHFIRLHFCDIFNPLTDFDLIIYDNLVTSNVNNDPDVSSPYYYDFVVHSDGTGLLNVSVVPSITSAIPNAFLNGLELMKVIELSGSIPLDGLDSESKKNISLPVVVGSVVGGLVLISVVMVLFLWIIKIRKQKPVENSDLLKIPTTAEGISYSRLHYGKITQGSSLPNLNLGLKISLLDLQFATENFDVKKIIGVGGFGNVYKGVLKNGMSVAVKRSVTGSDQGFPEFRTEIMVLSKIRHIHLVSLIGYCDERDEMILVYEYMEKGTLRDNLYNTNLPCLTWKQRLDICIGAAKGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDQDSYVSTCVKGTFGYLDPDYFRTQHLTEKSDVYSFGVVLLEVLCARPAIDLSCPREQVNLAEWGLLCKDKGTLEEIIDPSITRQINQNSLRIFSETVEKCLQDYSCDRPTMVDVLWDLEYALQLQIEPHDDSSVQLPNVQHIPCMSTLIEVDDMSIGRVDESETTTSMMLDRISCEANQGTTINSQMSPLESHFFR* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3964 844 Gene3D - 215 390 - -
Tpr4g3964 844 Gene3D - 29 182 - -
Tpr4g3964 844 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3964 844 Gene3D Phosphorylase Kinase; domain 1 462 571 - -
Tpr4g3964 844 PANTHER BNAC03G27170D PROTEIN 24 788 - -
Tpr4g3964 844 SUPERFAMILY Protein kinase-like (PK-like) 477 767 IPR011009 -
Tpr4g3964 844 Pfam Protein tyrosine and serine/threonine kinase 498 762 IPR001245 GO:0004672|GO:0006468
Tpr4g3964 844 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Tpr4g3964 844 Gene3D Transferase(Phosphotransferase) domain 1 572 785 - -
Tpr4g3964 844 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3964 844 Pfam Malectin-like domain 71 389 IPR024788 -
Tpr4g3964 844 CDD STKc_IRAK 502 767 - -
Tpr4g3964 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Tpr4g3964 844 PANTHER OS07G0166700 PROTEIN 24 788 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3964 Tpr-Chr4 46105792 46108884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3964 33 784 Receptor kinase-like Gene Family AT2G23200 44.854 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr4g3964 Malectin_like 3.2e-27 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3964 - - mtr:MTR_4g095032 1110.52