Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3962 ATGGGTCGTTTTAATAATGTTATTCTTGTATGGTCACTCACATTAATGCTATGTTTTATTCCATATACTACTTTTGCTCAGCTTAGTCCAAACCATTATGCTAACATTTGTCCAAATGTTCAAAGCATTGTTAGATCAGCTGTTCAAAAGAAATTTCAACAAACATTTGTTACTGTTCCTGCTACTCTTCGTCTCTTCTTTCATGATTGTTTTGTTCAGGGTTGTGATGCTTCAGTTTTGGTGGCATCGACCGGAAGTAATAAAGCAGAGAAAGATAACGCTGATAATCTTTCATTGGCTGGTGATGGATTTGACACAGTGATCAAAGCTAAAGCAGCATTAGATGCTGTTCCACAGTGTAGAAACAAAGTTTCTTGTGCTGATATTCTTGCCTTAGCAACCAGAGATGTTATTAATCTGGCTGGTGGACCATCCTATACAGTTGAATTGGGAAGATTTGATGGGTTGGTTTCAAGATCTTCAGATGTTAATGGAAGGCTACCTCAACCAGGCTTCAATTTGAACCAGCTTAATAGCTTATTTGCAGCCAATGGACTTACACAAACAGACATGATTGCCCTCTCAGGTGCACACACTCTTGGATTTTCTCACTGCGACAGGTTCTCCAATAGAATCCAAAGTCCAATTGATCCAACATTGAACAAACAATATGCAGCCCAATTACAACAAATGTGTCCTAGAAATGTTGATCCAAGAATAGCCATCAATATGGACCCAACAACTCCTAGACAATTTGACAATGCTTATTACACAAACCTTCAACAAGGAAAAGGATTATTTACTTCTGATCAAATTCTCTTCACTGATACAAGATCTAGGGCAACGGTTAATTCTTTCGCTTCTAGTGGTAACGTTTTTAACTCCAATTTCATCGCTGCCATGACTAAATTGGGTCGCATTGGAGTTAAAACTGCAAGAAATGGGAAAATCCGTACTGATTGTTCTGTGCTTTAA 975 0.3815 MGRFNNVILVWSLTLMLCFIPYTTFAQLSPNHYANICPNVQSIVRSAVQKKFQQTFVTVPATLRLFFHDCFVQGCDASVLVASTGSNKAEKDNADNLSLAGDGFDTVIKAKAALDAVPQCRNKVSCADILALATRDVINLAGGPSYTVELGRFDGLVSRSSDVNGRLPQPGFNLNQLNSLFAANGLTQTDMIALSGAHTLGFSHCDRFSNRIQSPIDPTLNKQYAAQLQQMCPRNVDPRIAINMDPTTPRQFDNAYYTNLQQGKGLFTSDQILFTDTRSRATVNSFASSGNVFNSNFIAAMTKLGRIGVKTARNGKIRTDCSVL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3962 324 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PANTHER - 6 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 Gene3D Peroxidase, domain 2 168 304 - -
Tpr4g3962 324 CDD secretory_peroxidase 27 323 IPR033905 GO:0004601|GO:0042744
Tpr4g3962 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Tpr4g3962 324 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Tpr4g3962 324 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 Gene3D - 31 323 - -
Tpr4g3962 324 PANTHER PEROXIDASE 6 324 - -
Tpr4g3962 324 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g3962 324 ProSiteProfiles Plant heme peroxidase family profile. 27 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3962 Tpr-Chr4 46064790 46068736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3962 1 321 Peroxidase AT5G67400 66.871 5.62e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3962 K00430 - gmx:100817540 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3962 4 46064790 46068736 Tpr4g3962 4 46064790 46068736 ECH
Tpr4g3962 4 46064790 46068736 Tpr2g5700 2 66139395 66143751 PCT