Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3955 ATGGCTGTAGAAGATTTGAGTAGTGCTATTGTTGTTAATGTGAGAGAGTTTGATCCAAATAAAGATAAAGAAAGTGTTGAAGCTGTTGAAAAAATATGTGAAGTTGGTCCCAGCGGAAAACTTTCTCTCTTCACCGACCTTCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTTCCTCATGCTGGTAGCAGAGATAGGCAATGAGATAGTTGGAATGATAAGAGGCTGCATCAAAACCGTTACATGCGGCAAAAAAGTATCAAGACCAACAAAAAACATAACCGAACCAAATTCCAATAATGTCCCTGTCTTCACAAAACTAGCCTACATACTAGGTCTACGAGTTTCACCAAATCACAGAAGAATGAGAATTGGCTTAAAACTTGTTCAAAAAATGGAACAATGGTTCAGAGAAAATGGTGCTGAGTATTCATACATGGCAACTGAAAACGACAACGTTGCATCCGTTAATCTTTTCACCGACAAATGCGGTTACTCAAAATTCCGTACACCGTCAATCCTAGTTAACCCTGTTTTCGCTCACTCTGTCAAAACGTCGTCGTCTAAAGTAACCATCATTAAACTAAACCCAAACGACGCCGAATTGATTTACCGTAACAAATTCTCCACCACTGAGTTTTTTCCTCGTGACATTGATTCCGTTTTGAAAAACAAACTCACTCTCGGAACTTTTCTCGCTGTTCCAAAAAATGGGCCTGGATTTCGGCCCAATAACTGGAAATGGACTGGCCCAGTATCTTTTTTATTGGACCCACCGAGTTCTTGGGCTTTAATTAGTGTTTGGAACTGTAAAGATTTGTTCACTCTTGAAGTTAAAGGCGCGTCGCGCGTGAGACGGTTATTGGCGAAAACAACGCGCGTGATAGATAAAACTTTTCCTTGGTTACGGTTACCGTCGATTCCGAATTTTTTTGAACCGTTTGGATTTCATTTAATGTATGGAATTGGAGGGGAAGGACCGGAGGTGTTGAAAATGGTGAAAGCTTTGTGTGGTTTTGCTCATAATCTTGCTATGGAAAATGGTTGTAGTGCTGTTGCTACTGAGGTTTCGAGCTGTGATCCTCTACGGTTCGCTATTCCTCATTGGAAAGCTTTGTCTTGTGAAGAGGATTTGTGGTGTATTAAGAGATTAGGTGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCTAAACCTGGATTCTCCATTTTTGTTGATCCTAGAGAGTTTTAA 1248 0.4071 MAVEDLSSAIVVNVREFDPNKDKESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGNEIVGMIRGCIKTVTCGKKVSRPTKNITEPNSNNVPVFTKLAYILGLRVSPNHRRMRIGLKLVQKMEQWFRENGAEYSYMATENDNVASVNLFTDKCGYSKFRTPSILVNPVFAHSVKTSSSKVTIIKLNPNDAELIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPKNGPGFRPNNWKWTGPVSFLLDPPSSWALISVWNCKDLFTLEVKGASRVRRLLAKTTRVIDKTFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEVLKMVKALCGFAHNLAMENGCSAVATEVSSCDPLRFAIPHWKALSCEEDLWCIKRLGEDYSDGSVGDWTKSKPGFSIFVDPREF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3955 415 CDD NAT_SF 63 146 - -
Tpr4g3955 415 PANTHER N-ACETYLTRANSFERASE 9 415 - -
Tpr4g3955 415 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 184 IPR000182 GO:0016407
Tpr4g3955 415 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 415 - -
Tpr4g3955 415 Pfam Acetyltransferase (GNAT) family 58 168 IPR000182 GO:0016407
Tpr4g3955 415 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 170 IPR016181 -
Tpr4g3955 415 Gene3D - 45 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3955 Tpr-Chr4 45928230 45930331 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tpr4g3955 Acetyltransf_1 5.2e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3955 - - gmx:100775317 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3955 4 45928230 45930331 Tpr4g3955 4 45928230 45930331 ECH
Tpr2g5695 2 66049774 66051726 Tpr4g3955 4 45928230 45930331 PCT