Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3954 ATGAAATCTCATCAACATTTTCATTATCATTTCTTTTTTATCATATTCATATCATTATTCTCTCTAACTTCACTCACTCCAATTCCCAACAGAAGAATCTTACACCAACCGTTACTAATTCCGGTCAATTCTGCTCCACCGCCGGAATTCTCTCCACCACAACCAGACATCACTCCTCCGTCACCTGACATTCCGTTTTTCAATGAATTCCCAACCGGACCACCGCCTCCGGTGGCGGCCAACAATAATCCGAATCTACCTTCACCGTCAGTTTTCAACTCCACAATTGCAAATCCAACGGCGACGAAACCTACTAAACCTGCTAAGAAAATTGCAATTGCGGTTACAGTGGCATTTTCGATATGTGTCATGTTTTGCATTGTAGCTTTCTTATTGTTTAAGCATAATAGAATGAAGAAGAAACACTCGTCGGAATCAGATAAACGGAAACTCGTCGGTGAGAATTTGAATTCATTTCTAGAAGATTCCACGCGGGTCCCACCACAAGCGCAATCATCATCATCAACAAGTTTTCTCTACATTGGAACTGTTGTAGAGCCTAACGGAACGCCGGTAGGTGTAACTAACCCTCACAAGGTTAACCGTTACCGTCAGAGTCCTGAGTTACATCCATTGCCGCCGCTTACGAAGTCTCTCGTCGTTGATTCTCACTCTCCACCGGCGGTTTCTTCGTCGTCGTCGTCAGATAACGATGATAGTCACGAGACGGTGTTTCATTCGCCGCGGGAGACTTCTTCACTAAATCTCAGCCGTGAAGATAGTTTTTACACGACGGTTTCTCGTCAAAGCTCTCTCGCAAACGGAAGTCCAACTGCGCCGGTTGCGGTAACTCCGGTGGTTCCTTTTTCAAAGAGAACTTCACCGAAATCTCGATTTTCTAGTTCTCCGCCGGTGATGATACCATCGATAGGTAGTGGTGGTTCTTCTAGAAGGCCGAAATTCTCATCGCCGCCACCGGCGCCGAATTTGACGCATCTTCATTCAAATGACTCCATAGGTTTACTTAACCTTCCTCCTCCTCCTCCTCCACCTCCGCCGCCGCCGAGAACTGGTTGGTCACCGTCACCGGTTATTGCACCATCTTCCTCTGTTTCAAGGAAGCATCATCAACGGTCTCAGTCTTCAATTCATGAAACAGATTCTGCATCTGGTAACAGTTTGAATGTGAAGAAAGCTTTGAAAGAAGATGATGAAATTGAATTTGATGAAGCAAATGGAAAACCTAAATTGAAAGCTCTGCATTGGGATAAAGTTCGTGCTACTTCAGATCGTGCTACTGTGTGGGACCAATTAAAATCAAGCTCATTTAAGTTAAATGAGGATATGATGGAGACACTGTTTGGTTGTAATTCATCAAATACTGCTCCTAAAGCTAAAGAGATGTCTGTAACCAGGAAACCAGTTTTTTCTACTGTTGAAAATGAGAATAGGGTGTTAGATCCTAAGAAATCACAGAATATAGCTATATTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTAGGCACTGAGTTATTTGAAACTCTAGTGAAGATGGCTCCTACAAAGGAGGAGGAGATAAAACTAAAAAATTATGATGGTGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAGCAAGTGCTCGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGTTGTACAGAGCTAATTTTGAAACAGAAGTTAACTATCTTAAGAAATCTTTCCAATCCCTCGAGGCAGCAAGTGAGGAATTAAAGAATAGCCGCTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGAACCAATCGCGGCGGTGCTAAATCTTTCAAACTGGACACACTCTTGAAACTTGCAGATATAAAGGGAACAGATGGAAAGACAACATTGCTCCATTTTGTTGTGCAAGAGATCATTAGATCTGAAGGTACAGGTGCTGAATCCACAAATGAGAATGTTCAAAACCAAACAAATCCCCAGTTCAATGAGGACGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTAAAAAAGGCGGCAGGAATGGACTCGGATGTCTTAAGCAGCTATGTCAGAAAGCTTGATATGGGGCTTGAGAAAGTGAGATTGGTTTTACAACATGTAAAACCAGATATGCAAGGAAACTTCTTTAACTCAACAGAGATATTTTTGAAAGATGCCGAAGAGAAAATACTAGAGATCAAAGCTGATGAGATAAGGGCCTTATACCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAACAAAGGAAGAAGCTCACCCTTTTAGAGTTTTTATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTATGCAAAGAAGTGGGAAGAATGCAGGATAGAACTTCGATCGCTTCATCCAGATCGTTCAGGATAGCTGCAAATGCATCGTTACCTGTTCTCAACAGGTACCGTGCAAGACAAGATACAAGTTCAGATGACGACAGTTTATCACCCTAG 2580 0.4202 MKSHQHFHYHFFFIIFISLFSLTSLTPIPNRRILHQPLLIPVNSAPPPEFSPPQPDITPPSPDIPFFNEFPTGPPPPVAANNNPNLPSPSVFNSTIANPTATKPTKPAKKIAIAVTVAFSICVMFCIVAFLLFKHNRMKKKHSSESDKRKLVGENLNSFLEDSTRVPPQAQSSSSTSFLYIGTVVEPNGTPVGVTNPHKVNRYRQSPELHPLPPLTKSLVVDSHSPPAVSSSSSSDNDDSHETVFHSPRETSSLNLSREDSFYTTVSRQSSLANGSPTAPVAVTPVVPFSKRTSPKSRFSSSPPVMIPSIGSGGSSRRPKFSSPPPAPNLTHLHSNDSIGLLNLPPPPPPPPPPPRTGWSPSPVIAPSSSVSRKHHQRSQSSIHETDSASGNSLNVKKALKEDDEIEFDEANGKPKLKALHWDKVRATSDRATVWDQLKSSSFKLNEDMMETLFGCNSSNTAPKAKEMSVTRKPVFSTVENENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELFETLVKMAPTKEEEIKLKNYDGDLSKLGPAERFLKQVLDIPLAFKRVEAMLYRANFETEVNYLKKSFQSLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGAESTNENVQNQTNPQFNEDEFRKKGLQVVAGLSRDFGNVKKAAGMDSDVLSSYVRKLDMGLEKVRLVLQHVKPDMQGNFFNSTEIFLKDAEEKILEIKADEIRALYLVKEVTEYFHGDTTKEEAHPFRVFMIVRDFLNILDQVCKEVGRMQDRTSIASSRSFRIAANASLPVLNRYRARQDTSSDDDSLSP* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3954 859 MobiDBLite consensus disorder prediction 223 238 - -
Tpr4g3954 859 Gene3D Formin, FH2 domain 415 837 IPR042201 -
Tpr4g3954 859 ProSiteProfiles Formin homology-2 (FH2) domain profile. 407 834 IPR015425 -
Tpr4g3954 859 MobiDBLite consensus disorder prediction 222 258 - -
Tpr4g3954 859 PANTHER FORMIN-LIKE PROTEIN 6 11 859 - -
Tpr4g3954 859 SMART it6_source 407 823 IPR015425 -
Tpr4g3954 859 PANTHER FORMIN-RELATED 11 859 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tpr4g3954 859 MobiDBLite consensus disorder prediction 366 395 - -
Tpr4g3954 859 SUPERFAMILY Formin homology 2 domain (FH2 domain) 345 821 - -
Tpr4g3954 859 Pfam Formin Homology 2 Domain 412 808 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3954 Tpr-Chr4 45897349 45901944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3954 382 849 FH2 protein (formin) Gene Family AT5G67470 68.153 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3954 - - gmx:100803578 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3954 4 45897349 45901944 Tpr4g3954 4 45897349 45901944 ECH
Tpr2g5692 2 65962202 65967270 Tpr4g3954 4 45897349 45901944 PCT