Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3918 ATGCTCCCTCTTCTCTCATCCCTCATCTTCCTCCTCCTCACACTCACATTCCACTCAGTTTCCACAACACACATAATCTCAGAATACCACACACTCCTCTCATTCAAATCATCTTCCATAACTAACGACCCAACAAACATCCTTTCCTCATGGAACCCAAAAACCACTCACTGTTCCTGGCACGGCATTACATGTGGCCAACACCGCCACGTCATCGCCATCAACCTCTCTTCTCTCACTCTCACCGGAACACTCTCCGACGACATTTCCAATCTCCCTTTCCTCACCAATCTCTCCCTCGCCGACAACAAATTCTCCGGCCCAATTCCCTCTTCTTTCTCCTCTCTAGCTTCTCTTCGTTATCTTAACCTCTCCAACAATGTCTTCAATGGCACCTTTCCTTCTCAACTATCCAACCTTTTCAATCTTCAAGTTCTTGATCTTTACAATAACAATATGACTGGTACTCTTCCGTTATCAGTTACTAAAATGAGTTTTCTTCGTCATTTGCATCTTGGTGGAAATTTTTTCAACGGAAAAATTCCACCGGAGTATGGTTTTTGGACTCATCTTGAATATCTTGCTGTTTCTGGTAATGAGCTTTCTGGACCCATTCCACCGGAGATTGGTAACCTTACTTCTCTTCGAGAGCTTTACATTGGTTACTATAATACCTACAACGGTGGTATTCCGCCGGAGATTGGTAACTTATCAGAGATGGTGAGATTTGATGCTGCTTACTGTGGATTAACCGGTGAAGTTCCGGCGGAGTTGGGTAAGCTTCAAAAGTTGGATACTTTGTTTCTTCAAGTGAATGCACTTTCTGGGTCTCTTACACCGGAGCTCGGAAACTTGAAAAGTTTGAAATCTATGGATTTGTCTAACAATGCTTTTTCCGGTGAAGTTCCGGCGAGTTTTGCTGAGCTTAAAAATCTTACCCTTTTGAACCTTTTTAGAAATAAGCTTCATGGAGCTATACCGGAGTTTATCGGCGAGATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACTGGAAGCATTCCTCGGAATTTAGGGAAGAATGGGAAACTTACACTTGTTGATGTTTCTTCAAACAAGTTAACTGGTTCATTACCTCCTAATATGTGTTTTGGCAACAAGCTTCAAACTTTAATAGCTTTAGGGAATTTTCTTCTTGGTCCTATTCCAGATTCACTTGGAAAGTGTAAATCTCTAAGTAGAATTAGAATGGGTGAGAATTTTCTAAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCAGAACTTACACAAGTTGAGCTTCAAGATAATCTTTTATCAGGAAACTTTCCTCAACCTGTTTCTATGTCTCCAAATCTTGGTCAAGTTACTCTTTCCAACAATAAGCTTTCTGGGCCATTACCACCTTCCATTGGGAACTTTACAAGTGTTCAAAAGCTTCTTCTTGATGGGAATCAATTCTCAGGTAAAATCCCTTCTGAGATTGGAAAGTTACAACAGCTTTCAAAGATTGATTTTAGTCATAACAAGTTTTCTGGTCCTATTGCTCCTGAGATTAGTCATTGTAAGCTTTTAACTTTTGTTGATCTTAGCCGAAACGAGCTTTCGGGTGAGATTCCAAATGAAATTACTAGTATGAGGATATTGAATTACTTGAACCTTTCAAAGAATCATCTACTTGGTACTATTCCAGGTTCTATTGCTTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATATAATAATCTAACTGGTTTGGTTCCAAGTACTGGCCAATTTAGTTACTTTAACTACACTTCTTTCCTTGGTAACCCTGAACTCTGTGGACCTTATTTGGGTCCTTGTAAAGATGGTGTTGCTAATGGTCCTCACAAATCTCATGTTAAAGGACCATTATCTTCTACTGTGAAGCTTTTGCTTGTTATTGGGTTGCTTGTGTGTTCTGCTGTGTTTGCTGTTGCTACAATTTTCAAAGCTCGGTCTTTGAAAAAGGCTAGCGAAGCTCGTGCGTGGAAACTAACCGCATTCCAGCGTTTGGACTTCACCGTTGATGATGTTCTTGATTCCTTGAAAGAGGACAACATCATAGGAAAAGGAGGAGCCGGCATTGTTTACAAAGGTGCAATGCCTAACGGTGATCTTGTTGCGGTGAAAAGGTTACCGGCTATGAGTAGGGGCTCTTCACATGATCATGGTTTTAATGCTGAGATTCAAACTTTGGGCCGAATTCGACACAGACACATTGTTAGATTATTGGGATTCTGTTCAAACCATGAGACAAATCTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTACAAAATTGCTGTGGAATCTGCAAAGGGTCTTTGTTATCTTCATCATGATTGTTCACCACTTATCGTTCATCGTGATGTTAAATCAAACAATATCTTACTTGATTCAAGTTTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGACGAAAAAAGCGATGTATACAGCTTCGGTGTGGTACTCCTAGAACTCGTAGCAGGGCGAAAACCAGTTGGAGAATTTGGCGATGGAGTAGACATTGTACAATGGGTGAGAAAAATGACTGATTCAAACAAAGAAGGTGTTCTAAAAGTACTCGATCCTAGACTTCCCTCGGTTCCACTTCACGAGGTGATGCATGTTTTCTATGTAGCCATGTTATGTGTTGAAGAACAAGCTGTAGAAAGACCAACTATGCGCGAAGTCGTTCAAATGCTCACTGAACTTCCAAAACCATCACCTAGCTCAAAACATGTTGAAGAAGACTTAACAATGTTAACAATCACTGAATCTTCTTTGTCTTCATCAAACAGTTTAGAGTCACCAGAAAAAGATCCTAAAGATCTTCTTAGTATATGA 3033 0.4022 MLPLLSSLIFLLLTLTFHSVSTTHIISEYHTLLSFKSSSITNDPTNILSSWNPKTTHCSWHGITCGQHRHVIAINLSSLTLTGTLSDDISNLPFLTNLSLADNKFSGPIPSSFSSLASLRYLNLSNNVFNGTFPSQLSNLFNLQVLDLYNNNMTGTLPLSVTKMSFLRHLHLGGNFFNGKIPPEYGFWTHLEYLAVSGNELSGPIPPEIGNLTSLRELYIGYYNTYNGGIPPEIGNLSEMVRFDAAYCGLTGEVPAELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNAFSGEVPASFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPRNLGKNGKLTLVDVSSNKLTGSLPPNMCFGNKLQTLIALGNFLLGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPVSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLLLDGNQFSGKIPSEIGKLQQLSKIDFSHNKFSGPIAPEISHCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLLGTIPGSIASMQSLTSVDFSYNNLTGLVPSTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPHKSHVKGPLSSTVKLLLVIGLLVCSAVFAVATIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVESAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPSPSSKHVEEDLTMLTITESSLSSSNSLESPEKDPKDLLSI* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3918 1010 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Tpr4g3918 1010 Gene3D Ribonuclease Inhibitor 358 622 IPR032675 -
Tpr4g3918 1010 ProSiteProfiles Protein kinase domain profile. 693 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3918 1010 Pfam Protein kinase domain 695 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3918 1010 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 1006 - -
Tpr4g3918 1010 SUPERFAMILY Protein kinase-like (PK-like) 686 964 IPR011009 -
Tpr4g3918 1010 Gene3D Phosphorylase Kinase; domain 1 658 770 - -
Tpr4g3918 1010 SUPERFAMILY RNI-like 74 395 - -
Tpr4g3918 1010 Gene3D Ribonuclease Inhibitor 85 353 IPR032675 -
Tpr4g3918 1010 Gene3D Ribonuclease Inhibitor 24 84 IPR032675 -
Tpr4g3918 1010 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 8 1006 - -
Tpr4g3918 1010 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Tpr4g3918 1010 MobiDBLite consensus disorder prediction 988 1010 - -
Tpr4g3918 1010 SUPERFAMILY L domain-like 303 618 - -
Tpr4g3918 1010 SMART serkin_6 693 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3918 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Tpr4g3918 1010 Gene3D Transferase(Phosphotransferase) domain 1 771 989 - -
Tpr4g3918 1010 SMART LRR_typ_2 285 308 IPR003591 -
Tpr4g3918 1010 SMART LRR_typ_2 309 333 IPR003591 -
Tpr4g3918 1010 SMART LRR_typ_2 116 140 IPR003591 -
Tpr4g3918 1010 SMART LRR_typ_2 573 596 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3918 Tpr-Chr4 45428691 45432806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3918 18 1010 Receptor kinase-like Gene Family AT5G65700 78.837 0.0 1582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g3918 Pkinase 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3918 - - gmx:547592 1672.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5647 2 65396797 65401150 Tpr4g3918 4 45428691 45432806 PCT