Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3912 ATGGACAAGGCTTCGATATTAGCGGATACAATCAAATACCTCAAAGAGCTTAAAGAGCGTTTGGCAGTTTTAGAAGAGCCGGGGGAGAAAACAAATGCAGATCAGTCCATGGTGGTTACGACTAAACCTGACGTCTGCAGCAACGAGCATTACTCATCATCTCATGAGAACACTGAAACTGAAAGTGCGGCTGATGGTATTGCCACTGGTCAATCACTCTTCAAGGTGGAAGCAAAAGTGAAAGGGAAAGATATGTTGATTCGGATCCACTGCCAAAAGCATTGTTGCATATCCAACAAGCATGATGGACTTCTTGTTAAAATCATCACTGAGATTCAAAGTTATCAACTATTTGTTGTCAATAACATTGTTTTAGGCTTTGGAGATTCTATCCTTGACATTACCATCATTGCTGAGATTGGTGAAGGGTACAACTTGAGCATAAAGGGACTTGTGAAGAACCTAAGCATTGCAGCATTGGAGTTTATGTCATCTTAA 498 0.4076 MDKASILADTIKYLKELKERLAVLEEPGEKTNADQSMVVTTKPDVCSNEHYSSSHENTETESAADGIATGQSLFKVEAKVKGKDMLIRIHCQKHCCISNKHDGLLVKIITEIQSYQLFVVNNIVLGFGDSILDITIIAEIGEGYNLSIKGLVKNLSIAALEFMSS* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3912 165 Gene3D - 1 58 IPR036638 GO:0046983
Tpr4g3912 165 PANTHER BHLH TRANSCRIPTION FACTOR 1 164 - -
Tpr4g3912 165 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3912 Tpr-Chr4 45359563 45363205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3912 2 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 33.735 2.18e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3912 - - mtr:MTR_4g098035 186.808