Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3910 ATGGACAAGGCTTCGATATTAGCGGATACAATCAAATACCTCAAAGAGCTTAAAGAGCGTTTGGCAGTTTTAGAAGAGCCGGGGAAGAAAACAAATGCAGATCAGTCCATGGTGGTTACGACTAAACCTGACGTCTGCAGCAACGAGCATTACTCATCATCTCATGAGAACACTGAAACTGAAAGTGCGGCTGATGGTATTGCCACTGGTCAATCACTCTTCAAGGTGGAAGCAAAAGTGAAAGGGAAAGATATGTTGATTCGGATCCACTGCCAAAAGCATGATGGACTTCTTGTTAAAATCATCACTGAGATTCAAAGTTATCAACTATTTGTTGTCAATAACATTGTTTTAGGCTTTGGAGATTCTATCCTTGACATTACCATCATTGCTGAGATTGGTGAAGGGTACAACTTGAGCATAAAGGGACTTGTGAAGAACCTAAGCATTGCAGCATTGGAGTTTATGTCATCTTAA 477 0.4067 MDKASILADTIKYLKELKERLAVLEEPGKKTNADQSMVVTTKPDVCSNEHYSSSHENTETESAADGIATGQSLFKVEAKVKGKDMLIRIHCQKHDGLLVKIITEIQSYQLFVVNNIVLGFGDSILDITIIAEIGEGYNLSIKGLVKNLSIAALEFMSS* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3910 158 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 1 157 - -
Tpr4g3910 158 Gene3D - 1 58 IPR036638 GO:0046983
Tpr4g3910 158 PANTHER BHLH TRANSCRIPTION FACTOR 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3910 Tpr-Chr4 45345017 45345741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3910 2 154 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 35.220 3.78e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3910 - - mtr:MTR_4g098035 195.282