Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3901 ATGCATGCTGGAATGGCTGCTGCATCTGAGATAACTAAGGAGGAAACACAAGTTTCTTCCAATGACAACATCCATCCTAGGCTGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTGCTTAACTCCTTGCTGAAATCGTCATATGCGGAGGCTTTCAACGGTCTGAAGGATGTGCAGAAAGGTGTTGAGCTCGGGAAGATGTGGGAGAATCTCATTCTGAAATTGTGCGATGATCATTTCTTCTACGAACAAGTAAAATTTGATTTTTTTTTGTTCAAATATTTTCGATGGTTTGTTTTTAGTTGTGGAGAGTTAGTTTGGGGTGGGGTTTCTGTGCTGCAGATTGAAAATTACAATAAGCCATTTCTTGATGTTCTGTCCAAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACCAAGATGAATTGGGCTCCCCACATGACGATGCCAACAAAAGAAAAATTGCATACAGGCATCGAATTATATCCCAAAAATACTTGCAGGGTTTACATAATATTTTAGATCACGAGACAATAAAAGTATGGGATGATTTGTATGATAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGACCTTTTTGAAGGAGTGTTCTGGTGAAAATAAAGATGCAGTTTCTTCCATTGCTTATGCTAACACAAGCACTGACTCAACTAATTCAAAGCATCAACATGTAAATGTCTTAGTGACATCCGGATCGTTGATACCATCTCTTGTAAAATGCTTGCTCTTTCATCTGGACAGCTTAATAACACATGAAAATGTGTATAGCTCTTGGGATGTGGGGAAAGTTCAATGTTTCCGATGGATCAAGGAGCGTTTCAACCATCCCAACGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTGAAGCTGCCGAAATCATGAGATGGCCATTTGTTAAGATTGACCCTCGGCCAGGAAAACCTCATAGGTTCCCTGGTCTCACATCCAAAACAGTTGGCCACTATTTTTCTGTGGTGTACCCAGACAACGAGAATGATGAAGAATGA 1059 0.4042 MHAGMAAASEITKEETQVSSNDNIHPRLDVYVWDMDETLILLNSLLKSSYAEAFNGLKDVQKGVELGKMWENLILKLCDDHFFYEQVKFDFFLFKYFRWFVFSCGELVWGGVSVLQIENYNKPFLDVLSKYDDGRDLSDYDFNQDELGSPHDDANKRKIAYRHRIISQKYLQGLHNILDHETIKVWDDLYDKTDEYTDKWLSSARTFLKECSGENKDAVSSIAYANTSTDSTNSKHQHVNVLVTSGSLIPSLVKCLLFHLDSLITHENVYSSWDVGKVQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFVKIDPRPGKPHRFPGLTSKTVGHYFSVVYPDNENDEE* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3901 352 PANTHER EYES ABSENT 116 345 IPR028472 GO:0004725
Tpr4g3901 352 PANTHER EYES ABSENT 13 87 IPR028472 GO:0004725
Tpr4g3901 352 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g3901 352 SUPERFAMILY HAD-like 28 326 IPR036412 -
Tpr4g3901 352 TIGRFAM EYA-cons_domain: EYA conserved domain 116 336 IPR006545 GO:0007275
Tpr4g3901 352 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 13 87 - -
Tpr4g3901 352 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 116 345 - -
Tpr4g3901 352 Gene3D - 29 324 IPR038102 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3901 28 350 Protein tyrosine phosphatase (PTP) family AT2G35320 55.385 8.24e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3901 - - gmx:100791661 552.747