Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3894 ATGGCTTATCTCGGCGATACAAGTCAAATATTGGTAGATAATACAGATGTTTTTACAACTGATCAAAAATTTGCTACTCCATATGATGTTGTCACATGGGCTCGAGATGTTGGAGATGCCAATAAAGTCGGTATAATCATTACTCGGTCGGATAAAAAGAACGGAATAAGAGGAAGAAATGACAAGTTGATTTTGGGTTGTGACAAAGGTGGAAAGTATGACTCTTCAGAAAGTTCCACGACAACTGCATCGAAAAAGTGTAACTGTCCATTTAAAATTAGAGTTGCACCTTCAACAGATGGTTCAAGATGGAAAGTTCAGGTTATTCATGGAGTTCACAACCACGAGCTACCTGACCAATATCATGGTCATCCTCGCAAGGCACGTTTAACCGCTGATGAAAACAAACGTGTTCAAGATTTGACAAAGTGTAAAGTAGCACCAAGGCACATTGTTTTAGATTTGAAAGATCAAAATCCAGAGTCTGTTGTTGATTGTCTTTATTTCGAACTCATGTGGACTATTGAATAG 531 0.3823 MAYLGDTSQILVDNTDVFTTDQKFATPYDVVTWARDVGDANKVGIIITRSDKKNGIRGRNDKLILGCDKGGKYDSSESSTTTASKKCNCPFKIRVAPSTDGSRWKVQVIHGVHNHELPDQYHGHPRKARLTADENKRVQDLTKCKVAPRHIVLDLKDQNPESVVDCLYFELMWTIE* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3894 176 Pfam Transcription factor AFT 73 117 IPR014842 GO:0000981|GO:0036086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3894 Tpr-Chr4 45192603 45193133 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g3894 AFT 6.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3894 - - cam:101511670 154.451