Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3892 ATGGGAAATGGAGTTTCGTCCCTCTGTTCTTGCTTTGAACCGGTTAACAACAACCGGACCAAAAAGAACCAACAAGTTATTTTCACTCAAGAAGAACCATTGGATGAAACCCTAGGTCACTCTTTCTGTTACGTTAGATCTTCGGCTCGGTTTATTTCTCCAACTCACTCCGATCGGTTTCTCTCTCCTTCAACTTCACTTCGCTTTTCACCAACTCACGAATCGGTACCCAAAACCCGACCCGATTTTCCTGAAACAACTTTCAAAGCTATTTCTGGTGCTTCTGTTAGTGCTAATAGTTCTGTTCCTAAAACGGTTATTCAGTTAGAGGAAGAATCTTCATCTGCACCACCTGTATTTGATTCTGCCGTCAAGGGTAGTATTGTCAATGGCTTTGAAAGTACGTCGTCGTTTTCTGCTCTTCCGCTTCAGCCTGTTCCGAGAGGTGGTGAGCTTTTTGAGGGGAGCGGTTATTTTCTCTCCGGTCCGAATGAGAGCGGTGCGCATTCTGGACCGATTAACGCAGGTTCTGGCGTTGATTCAGGTTTCTCCGGTGGGAGAGACGTTCCTTTTTCGGCGCCGTTAGGGGGGGTGTATGGAAGGAAGAAAGGTGTGTCTGGGTTTAGGAAGGCGTTTCAAAGGAAGGTGTCGGATAAGAAACGGCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAGGAGGTTCCGGTGACTGAGGGGAGGGAGAAGCTGGTGGAGGTGAAGAGTGAGAGCAATGTGCAGTGGGCGTTAGGGAAGGCTGGGGAGGATCGGGTTCATGTGGTGGTTTCAGAGGAGCAGGGGTGGTTGTTCGTTGGGATTTACGATGGTTTTAATGGTCCCGATGCACCGGAGTTTTTGATGGGTAATATGTACCGTGCTGTTTATAATGAGCTTCAGGGTTTGTTCTGGGAAGTTGAAGAAACAATGGAGAGTAATCCTGTTGAGGTCAAAGACAAAACGGAGGGAGAAAATTCCGGTGCTGGTTTGGTGAATGTGGTTCGCGAGACTGAAACTGGAACGGTTAGTAAAAGGCGTAGGTTGTGGGAGTTCCTGGCGGAAGACCCTGAAGATGGACTTGATCTTTCTGGGTCCGATAGGTTTGCATTTTCTGTTGACGATGCACTCAGTGTTAGCAATTCCAATGCAGGTTCTGCCAGTAGTAGACGGTGGCTTTTGCTGTCTAAACTGAAGAATGGGTTGTCCAAGCATAGGGAGGGTAATGGTAGGAAGTTGTTGCCGTGGAATTTGGGGAATGAGGAAGAGAAAGAAGAAAAGTCTGAGGTGGAAAACAAACCTTCTGCTTCTGGTACTGGCAGTGGTGGTGGGAAGAGACGGAAATTGGGTCCGGTTGATCATGATTTGGTTTTGAATGCAATGTCTCGGGCGCTTCAAGTAACAGAGCTTGCATATTTGGATATGACGGATAAGCGTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCTTGTCTGTTGGTTGTTTTGATGAGGGATGACGATGTGTATGTTATGAATGTTGGGGATAGCCGTGCAATTGTTGCGCATTATGAGCCCAAGGAGGGTCAGGATACTTCCAACATGGAACCTGCAAGCAAGGAACAACATGTTGGTGTTGGTTCCAGCAGTGGGAGCATAGTTGAGGAGTTATTAGCTTTAGATGGTACTCAAACTGAAGGTGCAGTGAAGGTAGGGAATCAGGGTCCTGCTCAAGAAATGAGGTTGGCGGCATTGCAGCTATCTACTGACCACAGCACCAGCATTGAAGAAGAAATTATTAGAATTAAAAATGAGCATCCTGATGATCCCCATTGTATAGTCAATGATAGAGTTAAAGGTCGTCTTAAGGTCACCAGAGCATTTGGGGCAGGATTTTTGAAACAGCCCAAGTTGAATGCTGCAGTACTGGAAATGTTTCGTAATGAATATATTGGAACCGCCCCATACGTATCTTGCTTCCCTTCTGTACGTCACCATAGATTATGCCCAAGGGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGAAGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTCCCAGAAGGAGATCCCGCCCAACATTTAATAGAAGAACTGCTTGTCCGTGCAGCCAAGAAAGCTGGATTAGATTTTCATGAATTGCTGGATATCCCGCAAGGAGATCGGAGGAAATATCATGATGATGTTACTGTCATGGTGATATCGCTTGAAGGAAGAATATGGAAATCGTCAGGCAAATATCTGTGA 2295 0.4606 MGNGVSSLCSCFEPVNNNRTKKNQQVIFTQEEPLDETLGHSFCYVRSSARFISPTHSDRFLSPSTSLRFSPTHESVPKTRPDFPETTFKAISGASVSANSSVPKTVIQLEEESSSAPPVFDSAVKGSIVNGFESTSSFSALPLQPVPRGGELFEGSGYFLSGPNESGAHSGPINAGSGVDSGFSGGRDVPFSAPLGGVYGRKKGVSGFRKAFQRKVSDKKRPWVVPVLNFVGRKEVPVTEGREKLVEVKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNMYRAVYNELQGLFWEVEETMESNPVEVKDKTEGENSGAGLVNVVRETETGTVSKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNSNAGSASSRRWLLLSKLKNGLSKHREGNGRKLLPWNLGNEEEKEEKSEVENKPSASGTGSGGGKRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKRLDTNPELALMGSCLLVVLMRDDDVYVMNVGDSRAIVAHYEPKEGQDTSNMEPASKEQHVGVGSSSGSIVEELLALDGTQTEGAVKVGNQGPAQEMRLAALQLSTDHSTSIEEEIIRIKNEHPDDPHCIVNDRVKGRLKVTRAFGAGFLKQPKLNAAVLEMFRNEYIGTAPYVSCFPSVRHHRLCPRDQFLILSSDGLYQYLNNEEVVSQVESFMEKFPEGDPAQHLIEELLVRAAKKAGLDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3892 764 CDD PP2Cc 459 752 IPR001932 -
Tpr4g3892 764 MobiDBLite consensus disorder prediction 415 455 - -
Tpr4g3892 764 MobiDBLite consensus disorder prediction 415 438 - -
Tpr4g3892 764 Pfam Protein phosphatase 2C 585 716 IPR001932 -
Tpr4g3892 764 PANTHER PROTEIN PHOSPHATASE 2C 29 19 762 - -
Tpr4g3892 764 SUPERFAMILY PP2C-like 259 753 IPR036457 -
Tpr4g3892 764 Gene3D - 234 759 IPR036457 -
Tpr4g3892 764 PANTHER PROTEIN PHOSPHATASE 2C 19 762 IPR015655 GO:0004722|GO:0006470
Tpr4g3892 764 SMART PP2C_4 247 750 IPR001932 -
Tpr4g3892 764 ProSiteProfiles PPM-type phosphatase domain profile. 247 752 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3892 Tpr-Chr4 45171297 45177062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3892 1 764 PP2C-type Phosphatase Gene Family AT2G35350 56.312 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3892 - - mtr:MTR_4g098650 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3892 4 45171297 45177062 Tpr4g3892 4 45171297 45177062 ECH