Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3844 ATGGATAATTTCCTTTCACAATTAACAACTATAGTACTAGCTATAGCATTATTGTTTCTATACAAAATATGGAGGATTAAAAAACCTAGTAACAAATCTAAGGGTATGAAACCACCAGAACCATCCTATACCTTACCTATAATAGGTCACCTCCGTCTACTAGGAAACCAAATCCCACTTGCAAGAATCTTTGCATCTTTTTCAGACAAATATGGTCCAATTTTCCAAATCCGTTTAGGAGCATACCCTGCCCTTATTATTTCAAACCAAGAAGCAATCAAAGAATGTTTCACAACAAATGACAAAATCTTAGCTTCAAGACCAAAGTCAAGTCATGGAATCTACCTTGGTTATAACTATGCTGGCTTTGGTTTTGCATCCTATGGTACATATTGGACTAAGCTAAAAAAATTAATCATGCTTGAATTACTCTCGTCTCGTCGCATAGAATCGTTGAGACATGTTTACGAATCGGAAATTGATAATTTTATTAAGGATTTATTCTTGTATGTTAAAGTTGGAAAGGTTAAGGTTGTGATTAGTGAATGGTTGGAAAGGTTAACATTTAATATAATCACAAAAATGATTTGTGGAAAAAGATATTTTGAGTATTTACAAGATGTGGATGATGTAGAAGCACATGGTAATATTGTGAAACTTATAAAAGAATTTATGCATATTTCTGGTGAGTTTGTTCCTAAGGATTTGATTCCAATTCTTGGTTGGTTTGGTTTTCAAGGACAAGTTCTTAAATCTATGAAAAGAATTGCTAAAGATTTGGATACACTTGTTGGAAGTTGGGTTGAAGAACATGTTGAGAAGAGTAGTAATGATTCAAATGAGAAACATGATTTTATTGATGTGATGCTTTCTACGATTGAAGATGATCCTGCTTCTGGTCATAATCGCGATACTATTATCAAGGCAAATGTTATGAATCTTATGCTAGCTGGGTCAGACTCAGCATCAACGATAATGACATGGGTACTAGCCCTATTGTTGAATAATAAAAATGCTTTAAAGCATGCACAAGAGGAGATTGACCATCACATAGGTAAGAACAGAAGGGTAGAACCGTCAGACATAAACAATCTAGTTTATGTACGAGCAATTTTCAAAGAAACATTGAGGTTATATCCGTCAGCTCCAATATTAGTACCCCATGAAGGAACAGAAGATTGTTACATTCAAGGCTATTATGTTCCGAAAGGGACACGTGTGTTTGCAAATGTATGGAAATTACATAGAGATTCGAGTATTTGGTCAGAGCCTGAAAATTTTTCCCCTGAGAGATTTATTAATGAGAATGGAGAAATTGATCATGAAAGTCATCATTTTAAGTACCTTCCCTTTGGATTAGGAAGAAGAGCTTGTCCTGGATCTATGTTTGCTACACAAGTTTGTCACATTACACTTGCTCGTTTGCTTCATGGATTTGATTTTGAAGTGCCAATGAATGAAGTTGTTGATATGAGAGAAGGGTTGGGTATAACTTTGCCTAAGTTAACTCCATTGGAAGTTGTTTTGACCCCACGATTACCCTATGAACTCTATCAATGA 1560 0.3487 MDNFLSQLTTIVLAIALLFLYKIWRIKKPSNKSKGMKPPEPSYTLPIIGHLRLLGNQIPLARIFASFSDKYGPIFQIRLGAYPALIISNQEAIKECFTTNDKILASRPKSSHGIYLGYNYAGFGFASYGTYWTKLKKLIMLELLSSRRIESLRHVYESEIDNFIKDLFLYVKVGKVKVVISEWLERLTFNIITKMICGKRYFEYLQDVDDVEAHGNIVKLIKEFMHISGEFVPKDLIPILGWFGFQGQVLKSMKRIAKDLDTLVGSWVEEHVEKSSNDSNEKHDFIDVMLSTIEDDPASGHNRDTIIKANVMNLMLAGSDSASTIMTWVLALLLNNKNALKHAQEEIDHHIGKNRRVEPSDINNLVYVRAIFKETLRLYPSAPILVPHEGTEDCYIQGYYVPKGTRVFANVWKLHRDSSIWSEPENFSPERFINENGEIDHESHHFKYLPFGLGRRACPGSMFATQVCHITLARLLHGFDFEVPMNEVVDMREGLGITLPKLTPLEVVLTPRLPYELYQ* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3844 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 SUPERFAMILY Cytochrome P450 38 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PANTHER CYTOCHROME P450 82C3-RELATED 14 518 - -
Tpr4g3844 519 Gene3D Cytochrome P450 23 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 Pfam Cytochrome P450 39 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3844 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 518 - -
Tpr4g3844 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3844 Tpr-Chr4 44488601 44491668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3844 39 518 Cytochrome P450 AT4G31940 46.545 6.79e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3844 - - gmx:100790675 755.747