Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3843 ATGGATCTTCCTTCTTATTTTCAATTTATTGCATCCATCTTAGCCTTATTGATTGTACACTTTTTCTCTAGATCTATTAGATCTCCTAATAGACCTAAAAAATTTACATTATTCAACATCAAACACAACAAAGTACCCGAACCATGTTATGCTTTACCTTTCATAGGTCACCTTCATCTTTTAAGCACTAAAGAACCATATTTTAGGACATTTTCAACCATGGCTGAAAAATATGGTTCAATCTTTTCCCTTAGGCTTGGTTGTCACAAAACCCTAGTTGTGAGTAGTAGGGAAATTGCCAAAGAATGTCTCACAAAAAATGACCAAGTTTTTGCCTCAAGGCCTAATGTAGCCGCAGGTAGATACCTAGGTTACAATAATGCAATTTTAGCTCTTGCCCCTTATGGTGATTATTGGAGAAATATGAGAAAAATTGCTACTATTGAGCTTTTATCAAGTCATAGACTTGAAAAGCTAAAGCATGTTAGAGATTTAGAGATATATTCTCTAGTAAAAAATTTGTACACATTTTTAAAAAATTCTAATGGTGCAATTGAAGTACCTATTAGTAAGTTTTTAGATCATATGACATTTAATATAATTGTGAGGATGATAGCTGGGAAAAGATTTGGTGGTGAAACAATAAATCAAGAAGATAGTGAGGCATGGAGATTAAGGAATGCAATTAAAGATACAACATATCTTAGTGGTGTTTTTGTGGTGGCTGATGCTATTCCTTTCCTTAGTTGGTTTGATTTTCAAGGTCATGTTGGTTTCATGAAGAGGACTTTTAAGGAAATGGACTTTATTCTTGATATGTGGATGCATGAGCATTTTAGAAAGAGAGATGAGGGACAAAATGGTAAATGTGAAGATGATTTCATGGATGTGTTGATATCAATGTTTGAAGAGGATGATGAAATTTGTGGCCACAATAGAGAGGTAGTTATCAAAGCAACAGCCATGATACTTATCCTTACAGCCTCAGGAAGCACAGCAATAACACTAGCATGGGCTCTATCCCTTCTTATAAACCATCCAAAGGTCTTAAGACAAGCCCAACAAGAATTGGACAACAACATAGGAAAACACAAATGGGTCCAAGAATCTGACATCAAAGACCTAAAATATCTTCAATCAATTATCAAAGAGACACTTAGGTTATACCCACCGGCACCCTTAACTGGAATAAGAGAAGCCATTGATGATTGCCACGTGGCAGGATACCATGTTTCTAAAGGCACACGTTTGCTTATTAACCTATGGAAATTACAAAGGGACCCACAAATATGGTCAAACCCTAATGAATTTCAACCTGAGAGATTTTACAACACTTTTGATCAAGTTGATTTTCAAAATCAAGATTTTGGGTATGTGCCATTTAGCTATGGTAGAAGGTCATGTGCTGGTGCAACATTTGGGTTGCAAGTGTTGCATTTGACTTTAGCTAGGTTGATTCAAGGGTTTGATATATACACAAAAGAAGGTGTTATTGTTGATATGAATGAAGGATTGGGATTGGCTTTGCCTAAGGAAAATCCACTTGAGGTTATGTTACAACCACGTCTTCCATTGGAGCTTTATGAAAGTCTTTGA 1596 0.3565 MDLPSYFQFIASILALLIVHFFSRSIRSPNRPKKFTLFNIKHNKVPEPCYALPFIGHLHLLSTKEPYFRTFSTMAEKYGSIFSLRLGCHKTLVVSSREIAKECLTKNDQVFASRPNVAAGRYLGYNNAILALAPYGDYWRNMRKIATIELLSSHRLEKLKHVRDLEIYSLVKNLYTFLKNSNGAIEVPISKFLDHMTFNIIVRMIAGKRFGGETINQEDSEAWRLRNAIKDTTYLSGVFVVADAIPFLSWFDFQGHVGFMKRTFKEMDFILDMWMHEHFRKRDEGQNGKCEDDFMDVLISMFEEDDEICGHNREVVIKATAMILILTASGSTAITLAWALSLLINHPKVLRQAQQELDNNIGKHKWVQESDIKDLKYLQSIIKETLRLYPPAPLTGIREAIDDCHVAGYHVSKGTRLLINLWKLQRDPQIWSNPNEFQPERFYNTFDQVDFQNQDFGYVPFSYGRRSCAGATFGLQVLHLTLARLIQGFDIYTKEGVIVDMNEGLGLALPKENPLEVMLQPRLPLELYESL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3843 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Tpr4g3843 531 Gene3D Cytochrome P450 39 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 Pfam Cytochrome P450 46 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PANTHER CYTOCHROME P450 82C3-RELATED 10 529 - -
Tpr4g3843 531 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PANTHER CYTOCHROME P450 82G1 10 529 - -
Tpr4g3843 531 SUPERFAMILY Cytochrome P450 46 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3843 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3843 Tpr-Chr4 44478771 44481279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3843 45 528 Cytochrome P450 AT4G31970 47.658 8.97e-164 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3843 K17961 - gmx:100787489 758.444