Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3838 ATGGGCTCACTTCCTACAGGAGCATCATATTTTTCAACCAATCATCATCTCAGTATGTTGCAACAAGTAATTGATGGCGACGATGTAGAAAACCGTTTAGTTCGAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCATACTGAACGATCAACAAAGGGAAAAACTTCTTAGCATGAGAGGTGTGCTATCTGTTTTTCCAAGCCAAAATTATCACCTACAAACTACAAGATCATGGGACTTCCTTGGATTTCCTCGATCAATCGAAAGAGATCAAACCATCGAGAGCGATTTGGTGATTGGAGTCATAGACAGCGGAATATGGCCAGAAGCTGAAAGTTTCAATGACAAAGGTTTTGGTCCGATTCCAAAAAAGTGGAAGGGAGTTTGCGCAGGTGGTGGTAACTTCAGTTGCAACAACAAGATCATTGGTGCACGATTTTACACCGATGAAGAAAAGACTGCAAGAGATTTTGGTGGTCATGGAACCCACACAGCATCAACAACAAGTGGAAGAGAGGTGAAAGATGCAAGCTTTTATGGTCTTGCAAAAGGCACTGCGAGAGGTGGAGTTCCGTCTTCGAGGATTTCTGTATACAAAGTATGCAAAGGAGATGGTACTTGCAGTAGCAAAGATATTTTAGGTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCCTCACAATCTCAATTGGGAGCCCCTTTGCCGTTGAATTTTTGAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTCACAGCACACGCAGCGGGAAATTATGGTCCCAGGCCAAGTAGTGTTTCTAGTAATGCACCTTGGTTATTTAGTGTTGCTGCAAGTTCCATTGATCGTCAATTTATTGATAAGGTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATACTATCCCCTCAAATGGAAGAAAACTTCCAATAGCTGTGCATAATGCTAAATCTTGCCAAGTTGCAAATGTAACTCCTGAAATATGTGGTTGTATGGACCAAAATATGGTAAGGGGTAAGCTTGTTTTGTGTGGACAACCAGGGGGTGAAGTATTGGCTTATATGAATGGTGCAATTGGTTCAATCGTTCAAGTTCCAAAATCTCAAAATGAACTTGCTGTGGTCACTGCAAAACCTTCACTTAACATGGATCCAGAAAACTATGCTCATGTTAAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAAGAAACTCTCCATGACAACAATGCTCCTAGAATTCCCTTTTTCTCTTCACGTGGTCCAAATTCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCCCCGGGATCGGATATCTTGGCTGCATTTTCACCTGTAGCATCACCCACAGGGGATCCGGATGACAAAAGAAGCGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCTCATGTTGCTGGAGTTGTTGCATATGTGAAATCATTTCATCCAAATTGGTCACCTGCAGCTATCAAATCTGCCATTATGACCACAGCGAAACCAATAAATGGTACTTATAATGATATGGCAGGTGAGTTTGCTTACGGATCGGGGAATATCAATCCACATCAAGCTGTTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTACGTGCAAATGCTTTGTAATTATGGTTATGATGCTGACAAAATAAAGAAGATCAGTGGAGATAATTCAAGTTGCCATGGAGCTTCCAACATATCATTTCTGAAAGATTTAAATTATCCTTCACTGGTGATTCCTATTGAGCCTGGTAAACGATTCAATGTCAAGATTCATAGAACAGTTACAAATGTTGGCGCTCGCAACTCCACCTACAGGGCTACTATCATACCAATTCAAAATATCAAGATTAGTGTGAAACCAAATGTTCTCTCATTCAGATCATTAAACGAGAAACAATCATTTGTTGTCACTGTTGTTGGGAGAGCAATATCAAATCAAACTGCGATTTCATCCTCGCTTGTTTGGTCAGATGGCACCCACCATGTGAAGAGCCCAATCATTGTGCAAAAATCATCATGA 2091 0.4022 MGSLPTGASYFSTNHHLSMLQQVIDGDDVENRLVRSYKRSFNGFAAILNDQQREKLLSMRGVLSVFPSQNYHLQTTRSWDFLGFPRSIERDQTIESDLVIGVIDSGIWPEAESFNDKGFGPIPKKWKGVCAGGGNFSCNNKIIGARFYTDEEKTARDFGGHGTHTASTTSGREVKDASFYGLAKGTARGGVPSSRISVYKVCKGDGTCSSKDILGAFDDAIADGVDILTISIGSPFAVEFLKDPIAIGSFHAMEKGILTAHAAGNYGPRPSSVSSNAPWLFSVAASSIDRQFIDKVILGNGKTFIGKSINTIPSNGRKLPIAVHNAKSCQVANVTPEICGCMDQNMVRGKLVLCGQPGGEVLAYMNGAIGSIVQVPKSQNELAVVTAKPSLNMDPENYAHVKSYTNSTKYPVAEILKSEETLHDNNAPRIPFFSSRGPNSLVPEIMKPDISAPGSDILAAFSPVASPTGDPDDKRSVKYNIISGTSMACPHVAGVVAYVKSFHPNWSPAAIKSAIMTTAKPINGTYNDMAGEFAYGSGNINPHQAVHPGLVYDITKQDYVQMLCNYGYDADKIKKISGDNSSCHGASNISFLKDLNYPSLVIPIEPGKRFNVKIHRTVTNVGARNSTYRATIIPIQNIKISVKPNVLSFRSLNEKQSFVVTVVGRAISNQTAISSSLVWSDGTHHVKSPIIVQKSS* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3838 696 Pfam Subtilase family 96 538 IPR000209 GO:0006508|GO:0008236
Tpr4g3838 696 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 74 IPR037045 -
Tpr4g3838 696 SUPERFAMILY Subtilisin-like 78 546 IPR036852 GO:0004252|GO:0006508
Tpr4g3838 696 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 694 IPR045051 -
Tpr4g3838 696 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Tpr4g3838 696 CDD PA_subtilisin_like 296 415 - -
Tpr4g3838 696 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 1 694 - -
Tpr4g3838 696 Pfam Fibronectin type-III domain 594 692 IPR041469 -
Tpr4g3838 696 ProSiteProfiles Serine proteases, subtilase domain profile. 70 546 - -
Tpr4g3838 696 PRINTS Subtilisin serine protease family (S8) signature 95 114 IPR015500 -
Tpr4g3838 696 PRINTS Subtilisin serine protease family (S8) signature 157 170 IPR015500 -
Tpr4g3838 696 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Tpr4g3838 696 CDD Peptidases_S8_3 71 519 IPR034197 -
Tpr4g3838 696 Gene3D - 289 423 - -
Tpr4g3838 696 Pfam Peptidase inhibitor I9 13 73 IPR010259 -
Tpr4g3838 696 Gene3D - 563 695 - -
Tpr4g3838 696 Gene3D Peptidase S8/S53 domain 97 559 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3838 Tpr-Chr4 44428704 44431260 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3838 1 692 Subtilisin-like Serine Gene Family AT5G59100 51.778 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3838 - - mtr:MTR_6g055410 956.822