Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3834 ATGTCTAAGCATAATGTTCTTTTATTATTCTTTGTGTTTGTGGTTTTGTCATCAACAATTTTTTTAGTGTGTGATGGCACTGAAATGGATGATGAAAGCAGTAAACTTTACATCGTATATATGGGCTCACTTCCTACAGGAGCATCATATTTTTCAACCAACCATCATCTCAGTATCTTGCAACAAGTAATTGATGGCGACGATGTAGAAAATCGTTTAGTTCGAAGTTACAAGAGGAGTTTTAATGGTTTTGCTGCCATACTCAACGATCAACAAAGGGAAAAACTTCTTAGCATGAGAGGTGTGCTATCTGTTTTTCCAAGCCAAAATTATCACCTACAAACTACAAGATCATGGGACTTCCTTGGATTTCCTCGATCAATCGAAAGAGATCAAACCATCGAGAGCGATTTGGTGATTGGAGTCATAGACAGCGGAATATGGCCAGAAGCTGAAAGTTTCAATGACAAAGGTTTTGGTCCGATTCCAAAAAAGTGGAAGGGAGTTTGCGCAGGTGGTGGTAACTTCAGTTGCAACAACAAGATCATTGGTGCACGATTTTACACCGATGAAGAAAAGACTGCAAGAGATTTTGGTGGTCATGGAACCCACACAGCATCAACAACAAGTGGAAGAGAGGTGAAAGATGCAAGCTTTTATGGTCTTGCAAAAGGCACTGCGAGAGGTGGAGTTCCGTCTTCGAGGATTTCTGTATACAAAGTATGCAAAGGAGATGGTACTTGCAGTAGCAAAGATATTTTAGGTGCATTTGATGATGCAATTGCTGATGGAGTTGACATCCTCACAATCTCAATTGGGAGCCCCTTTGCCGTTGAATTTTTGAAAGATCCTATTGCCATTGGTTCTTTTCATGCCATGGAGAAAGGGATACTCACAGCACACGCAGCGGGAAATTATGGTCCCAGGCCAAGTAGTGTTTCTAGTAATGCACCTTGGTTATTTAGTGTTGCTGCAAGTTCCATTGATCGTCAATTTATTGATAAGGTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATACTATCCCCTCAAATGGAAGAAAACTTCCAATAGCTGTGCATAATGCTAAATCTTGCCAAGTTGCAAATGTAACTCCTGAAATATGTGGTTGTATGGACCAAAATATGGTAAGGGGTAAGCTTGTTTTGTGTGGACAACCAGGGGGTGAAGTATTGGCTTATATGAATGGTGCAATTGGTTCAATCGTTCAAGTTCCAAAATCTCAAAATGAACTTGCTGTGGTCACTGCAAAACCTTCACTTAACATGGATCCAGAAAACTATGCTCATGTTAAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAAGAAACTCTCCATGACAACAATGCTCCTAGAATTCCCTTTTTCTCTTCACGTGGTCCAAATTCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCCCCGGGATCGGATATCTTGGCTGCATTTTCACCTGTAGCATCACCCACAGGGGATCCGGATGACAAAAGAAGCGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCTCATGTTGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAAATTGGTCACCTGCAGCTATCAAATCTGCCATTATGACCACAGCGAAACCAATAAATGGTACTTATAATGATATGGCAGGTGAGTTTGCTTACGGATCGGGGAATATCAATCCACATCAAGCTGTTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTACGTGCAAATGCTTTGTAATTATGGTTATGATGCTTACAAAATAAAGAAGATCAGTGGAGATAATTCAAGTTGCCATGGAGCTTCCAACATATCATTTCTGAAAGATCTAAATTATCCTTCACTGGTGATTCCTATTGAGCCTGGTAAACGATTCAATGTCAAGATTCATAGAACAGTTACAAATGTTGGCGCTCGCAACTCCACCTACAGGGCTACTATCATACCAATTCAAAATATCAAGATTAGTGTGAAACCAAATGTTCTCTCATTCAGATCATTAAACGAGAAACAATCATTTGTTGTCACTGTTGTTGGGAGAGCAATATCAAATCAAACTGCGATTTCATCCTCGCTTGTTTGGTCAGATGGCACCCACCATGTGAAGAGCCCAATCATTGTGCAAAAATCAACATGA 2211 0.3971 MSKHNVLLLFFVFVVLSSTIFLVCDGTEMDDESSKLYIVYMGSLPTGASYFSTNHHLSILQQVIDGDDVENRLVRSYKRSFNGFAAILNDQQREKLLSMRGVLSVFPSQNYHLQTTRSWDFLGFPRSIERDQTIESDLVIGVIDSGIWPEAESFNDKGFGPIPKKWKGVCAGGGNFSCNNKIIGARFYTDEEKTARDFGGHGTHTASTTSGREVKDASFYGLAKGTARGGVPSSRISVYKVCKGDGTCSSKDILGAFDDAIADGVDILTISIGSPFAVEFLKDPIAIGSFHAMEKGILTAHAAGNYGPRPSSVSSNAPWLFSVAASSIDRQFIDKVILGNGKTFIGKSINTIPSNGRKLPIAVHNAKSCQVANVTPEICGCMDQNMVRGKLVLCGQPGGEVLAYMNGAIGSIVQVPKSQNELAVVTAKPSLNMDPENYAHVKSYTNSTKYPVAEILKSEETLHDNNAPRIPFFSSRGPNSLVPEIMKPDISAPGSDILAAFSPVASPTGDPDDKRSVKYNIISGTSMACPHVAGVAAYVKSFHPNWSPAAIKSAIMTTAKPINGTYNDMAGEFAYGSGNINPHQAVHPGLVYDITKQDYVQMLCNYGYDAYKIKKISGDNSSCHGASNISFLKDLNYPSLVIPIEPGKRFNVKIHRTVTNVGARNSTYRATIIPIQNIKISVKPNVLSFRSLNEKQSFVVTVVGRAISNQTAISSSLVWSDGTHHVKSPIIVQKST* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3834 736 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tpr4g3834 736 PRINTS Subtilisin serine protease family (S8) signature 197 210 IPR015500 -
Tpr4g3834 736 PRINTS Subtilisin serine protease family (S8) signature 523 539 IPR015500 -
Tpr4g3834 736 Pfam Peptidase inhibitor I9 37 113 IPR010259 -
Tpr4g3834 736 Pfam Fibronectin type-III domain 634 732 IPR041469 -
Tpr4g3834 736 CDD PA_subtilisin_like 336 455 - -
Tpr4g3834 736 Gene3D - 603 735 - -
Tpr4g3834 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Tpr4g3834 736 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 36 734 - -
Tpr4g3834 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 524 534 IPR023828 -
Tpr4g3834 736 Gene3D Peptidase S8/S53 domain 137 599 IPR036852 GO:0004252|GO:0006508
Tpr4g3834 736 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 734 IPR045051 -
Tpr4g3834 736 Gene3D - 329 463 - -
Tpr4g3834 736 SUPERFAMILY Subtilisin-like 118 586 IPR036852 GO:0004252|GO:0006508
Tpr4g3834 736 CDD Peptidases_S8_3 111 559 IPR034197 -
Tpr4g3834 736 Pfam Subtilase family 136 578 IPR000209 GO:0006508|GO:0008236
Tpr4g3834 736 ProSiteProfiles Serine proteases, subtilase domain profile. 110 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3834 Tpr-Chr4 44394706 44397400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3834 30 732 Subtilisin-like Serine Gene Family AT5G59100 51.821 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3834 - - mtr:MTR_1g006990 988.023