Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3826 ATGGAAAGGTATAAAATTTTGAAAGAGCTTGGAGATGGTTCTTGCGGTCATGTATATAAAGCCCATGATATGAGAACTTTTGAGATTGTTGCTGTCAAAAGGTTGAAAAGAAAGTTTTGCTTTTGGGAAGAATACACAAATTTAAGAGAAGTTAAGGCCCTTCGTAAAATGAATCACCCAAATATCATAAAGTTGAGAGAGGTTGTTAAAGAAAATAACGAACTGTTTTTCATTTTTGAATACATGGATTGTAATCTTTATCAATTAATAAAAGAGAGAGAAAAACCCTTTTCAGAGGAAGAGATACGATGCTTTATGAAGCAAGTGCTCCAAGGACTTAGTCACGTGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAAAATTTGCTGGTGACAAATGATGTTATTAAAATTGCTGATTTTGGACTGGCTAGAGAATTATCATCAATGCCTCCATATACTCAATATGTTTCCACACGGTGGTACCGGGCACCTGAAGTTTTGTTGCAGTCCCTGTGTTATACTCCTGCTGTAGACATGTGGGCTATTGGTGCTATATTAGCGGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACTGCATTCTTGGTATGCCAGATTCAACTTGTTTCACCATAGGTGCAAACAACTCTAGGCGATTGGACTTTGTTGGTCATGAAGTTGTTCCACCTATGAAGCTTTCTGATATCATTCCAAATGCTAGCACGGAAGCTATAGATTTGATCACACAATTGTTGTCGTGGGACCCATCAAGAAGGCCAGATGCGGATCAGTCACTGCAACATCCTTTTTTCCATGTGGATACAAGGGTTCCTCATTCACTCAGTGATCCATTTGAGCTGAAGCTGAGTAACAAAAGGGCAAAGCCAAATCTTGAGCTGAAACTGCATGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACGTTGGCTGTAAAGCCCAGTGTTTCAAACTTGGATGTGGTTCAAAATGCATCGCGGGGTATGGGAAAGAATATGCTATTTTGCTCGGATTTTAATGATCATTCAGACCAACCAGTTTTTTGGACATTATTATCTCCTGATCAGAATGGAGTTCACAACCCAGCAGAGACTTCATTATCATTGTCATTTGGATCTGTTCAACATCAGCCAATTGGAGTTCCACAGACAACAGGGTTTTCTTTTCAACCTTTGCAGCCTAACATCTTAACTACACCATTTTTGACATTGTCTTCTCCGTACCAGCGTGGACATTGCCTTTGA 1308 0.3937 MERYKILKELGDGSCGHVYKAHDMRTFEIVAVKRLKRKFCFWEEYTNLREVKALRKMNHPNIIKLREVVKENNELFFIFEYMDCNLYQLIKEREKPFSEEEIRCFMKQVLQGLSHVHKKGFFHRDLKPENLLVTNDVIKIADFGLARELSSMPPYTQYVSTRWYRAPEVLLQSLCYTPAVDMWAIGAILAELFTLTPIFPGESEIDQLYKIYCILGMPDSTCFTIGANNSRRLDFVGHEVVPPMKLSDIIPNASTEAIDLITQLLSWDPSRRPDADQSLQHPFFHVDTRVPHSLSDPFELKLSNKRAKPNLELKLHDFGPDPDDCFLGLTLAVKPSVSNLDVVQNASRGMGKNMLFCSDFNDHSDQPVFWTLLSPDQNGVHNPAETSLSLSFGSVQHQPIGVPQTTGFSFQPLQPNILTTPFLTLSSPYQRGHCL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3826 435 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3826 435 Gene3D Transferase(Phosphotransferase) domain 1 83 293 - -
Tpr4g3826 435 CDD STKc_MAK_like 4 284 - -
Tpr4g3826 435 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 321 - -
Tpr4g3826 435 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3826 435 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 321 - -
Tpr4g3826 435 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Tpr4g3826 435 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3826 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tpr4g3826 435 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3826 Tpr-Chr4 44302193 44310630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3826 7 284 MAP Kinase Gene Family AT4G01370 39.024 7.48e-62 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Tpr4g3826 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3826 K08829 K08830 gmx:100792842 792.341