Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3821 ATGAAGCCATTTTCAATTTTTCTCCTTTTCATCATCTTCTTCGTTGCATCAGCATTAGTTTCTGCTAAGAAAGAGGCTGATGTAACTGAGTTGCAGATTGGCGTTAAGTATAAACCATCATCATGTGAAGTTCAGGCACACAAAGGTGATAAAGTGAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAGTCCAATTGATTTTGAGCTTGGTGGTGGTCAAGTGATCAAAGGATGGGACCAAGGACTATTGGGAATGTGTCTCGGTGAGAAGCGGAAATTGAAAATACCAGCAAAACTTGGTTATGGAGAACAGGGCTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACCGAGCTTGTGGGAGTGAACGACAAAAGTTTAAGCGGAGATAACTCGGAACTTTAG 447 0.4183 MKPFSIFLLFIIFFVASALVSAKKEADVTELQIGVKYKPSSCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNSPIDFELGGGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLSGDNSEL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3821 148 PANTHER - 5 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Tpr4g3821 148 Gene3D - 17 137 IPR046357 GO:0003755
Tpr4g3821 148 SUPERFAMILY FKBP-like 36 139 - -
Tpr4g3821 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 5 146 - -
Tpr4g3821 148 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
Tpr4g3821 148 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3821 Tpr-Chr4 44264150 44267756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3821 19 147 Calmodulin-binding Proteins AT3G25230 29.927 3.42e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3821 K09569 - gmx:100305479 241.121