Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3813 ATGTATTCATCATCATCATCTTCATCCACCAATCCACAATACCTTCATGACGTATTCATAAATTTCAGAGGTGAAGACACACGCAGAACATTTGTTTCACATCTTTATGCAGTCCTCTCAAACTCTGGAATCAACACTTTTCTCGACAACGAAAAGCTCGAAAAAGGCGAAGAAATTGGACATGAATTACTTCAAGCAATTACTGTTTCTCATATATCAATCATTGTTTTCTCAAAAAGTTATGCTGAATCTAGTTGGTGTTTAAATGAATTGGATAAAATTATGGAATGTCGTAGAACTCAAAGTCAAGTTGTTTTACCTGTTTTTTATGATGTTGATCCTTCTGTTGTTAGACATCAGAAAGGTGAATTTGGTAAAGCTTTGGAAGTTAGTGCTAAAAGTAGGTATATAATTGAGGAAGTTATGGAAAGAGTTTTGAATAGATGGAAAAAAGTTTTGACTGAAGCTTCTAATTTGTCTGGTTGGGATGGAAGCACTTTCAGGAGTGACCGTGAATTAGTGAATAAAATTGTTGAGGCCATTTTACCAAAACTAGACAACAGTACCTTGCCTATAACTGAATTTCCAGTTGGGTTGGAATCCCATGTGAAGCAGGTGGTTGGGTTGATTGAGAAACAAGCGGGCAATTTTTGTATAGTAGGGATCTGGGGCATGGGAGGATCAGGCAAAACAACTGTAGCCAAAGCTGTCTACAATGAAATTCATCGTAGATTTGATTGTACAAGTTTCATCGAAAATATAAGGGAAGTTTGTGAACAGGATACTAGAGGGCATATGCATTTACAACAACAACTTCTTTCAGATGTCCTCAAAACAAAGGAGAAGATACATAGCATTGCGTTGGGGACAACTAGGATCCAAAAAGTGGTTTCTGGAAAAAAAGCACTCGTGGTACTTGATGATGTGACCGATTTTCAGCAAATAAAAGTCCTATGTGGGAATAATAAATGTTTTGGTTCTGGAAGTGTGTTAATTGTTACAACCAGGGATGTACACATACTTAAGTTACTTAAAGTTGTCTCTGTCTATAAAATGGAGGAAATGCACAAAAACGAGTCCCTTGAGCTATTCTCTTGGCATGCTTTTAGAAAAGCAAGTCCTAAAGGAGGCTTTAGTGAACTCTCAAGAAGCGTGGCTGCTTATTGTGGAGGGTTACCATTGGCTCTTGAAGTCCTTGGATCCTACTTATTTGATAGGACAAAACAAGAATGGACAAGTGTACTATCGAAGTTAGAGAGAATTCCCAATGATCAAGTGCATGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGATATGGTAAAGGATATATTTCTTGACATATGCTGTTTCTTTATTGGTAAGGACAGAGCCTATGTTACAGAGATACTTAATGGCTGTGGACTTTATGCTGATATTGGAATAGCCGTCCTCATAGATCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGATTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGCGAAAGTTCAGCAAGAGAGCCAGGGAAGCGTAGTCGATTGTGGTTACACGAGGAAGTACATGATGTTTTGACAAAAAATACTGGAACAGAAACTGTTGAGGCACTGATTTTGAACATGCAAAGAACAGGCAGAGTTAGCTTTAGTACTAATGTTTTCCAAGACATGAAGAAACTGAGACTTTTACAACTTGATCGTGTTGACCTCACTGGAGATTTTGGGCATCTTTCCAAAAACCTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTCTGTACCCAATGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAACATAGCAATGTTAAACAAGTTTGGAAGGAAGCCAAGTTTTTGCAGAAGCTAAAAATTCTCAATCTCAGTCATTCCAGGCACTTGCAAAGCACCCCTGACTTTACAAAATTACCGAATCTAGAAAAACTCATTATGAAGGATTGTCCAAGTTTATCCGATATACACCCGTCCATTGGAGATCTCAAGAATCTTCTTCTCATAAATTTGAAGGACTGTTCAAGTCTTGTCAATCTCCCAAGAAAGATGTATAAATTGAGAACAGTGAAAACTCTCATCATTTCTGGTTGTTCAAAGATCGTCAAATTGGAAGAAGATATAGCGCAAATGAAATCCTTGACAACTCTAATTGCAGCAAACACTGGTGTCAAACAAGTGCCTTTTTCGATTGTTAGATCAAAAAACATTGGATATATATCCCTATGTGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATTCCTTAGCACGTATTCCCCCATTTGGTGGCATTTCAATGTCTCTTGTTTCCTTGGATGTAGATAGTAAGAATTTGGGTTTAATCTATCAATCACCAATACTTAGCAGCGGTTCAAAACTTAGATGTGTTTCGGTACAGTGTCACTCAGAGATTCAACTGAAACAAGAATTGAGAAGATTTATTAATGATCTTACTCAGTTGGAAATATCGCTTGCATCACAAACCTCAGATCTTTCCCTGAAATCTATTTTGATTGGAATGGGAAGTTGCCACATAGTCAACGAGACTCTTGGCAAGAGCTTATCGCAGGGACTGTCGACCAATGATTCAATTGCTTCTTTCCTTCCGGGTAACAATTATCCTTCTTGGTTAGCCTATACATCTGAAGGACCATCAGTATATTTTCAAGTGCCCGAGGATAGTGATTGTGGAATGAAGGGAATAACTTTATGTGTTATTTATTCATCGACACTCGAAAACATGGCAACTGAATGTCTCGCTAGTGTTTTGGTCATTAATTACACAAAATTCACTATTCAGATATACAAGAGAGACACAGTAATCTCCTTTAATGATGAAGATTGGAAGAGTGTAGTATCAAATTTAGAGGTTGGTGACAATGTAGAGATTTTTGTTGCTTTTGGGCATGGATTGACCGTTAAGGAGACGGCTGTTTATCTAATATATGGTCAGTCAACTGCAATGCAAATTGAGCCATCAGTTACTGTCGAAGTTGAGCCAATACCTGAAGTGGCGGCGCAACTATTACTTGATGTGAAAACGGAGCCATTACCAGGAGTGGAAGCGCAACTATCACCTGATGTGAAGAAAACGGAGCCATCACCACCAGCTGTGGAAGCGCAACCATCACCTGATGTGAAAACGGAGTCGCCACTTACTGTCAAGACTGAGCCATCACCAAAGCCAAATGAGAAAATCTTTGTAAGACTCGCAAAGAGCGTCAGAGTTTGTTTTTGCTTGAACCAGAGTCCAAAATTGAGATCTTAG 3345 0.3839 MYSSSSSSSTNPQYLHDVFINFRGEDTRRTFVSHLYAVLSNSGINTFLDNEKLEKGEEIGHELLQAITVSHISIIVFSKSYAESSWCLNELDKIMECRRTQSQVVLPVFYDVDPSVVRHQKGEFGKALEVSAKSRYIIEEVMERVLNRWKKVLTEASNLSGWDGSTFRSDRELVNKIVEAILPKLDNSTLPITEFPVGLESHVKQVVGLIEKQAGNFCIVGIWGMGGSGKTTVAKAVYNEIHRRFDCTSFIENIREVCEQDTRGHMHLQQQLLSDVLKTKEKIHSIALGTTRIQKVVSGKKALVVLDDVTDFQQIKVLCGNNKCFGSGSVLIVTTRDVHILKLLKVVSVYKMEEMHKNESLELFSWHAFRKASPKGGFSELSRSVAAYCGGLPLALEVLGSYLFDRTKQEWTSVLSKLERIPNDQVHEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKIGMHDLIRDMGREIVRESSAREPGKRSRLWLHEEVHDVLTKNTGTETVEALILNMQRTGRVSFSTNVFQDMKKLRLLQLDRVDLTGDFGHLSKNLRWVNWQRSTFNSVPNDFDQENLVAFELKHSNVKQVWKEAKFLQKLKILNLSHSRHLQSTPDFTKLPNLEKLIMKDCPSLSDIHPSIGDLKNLLLINLKDCSSLVNLPRKMYKLRTVKTLIISGCSKIVKLEEDIAQMKSLTTLIAANTGVKQVPFSIVRSKNIGYISLCGYEGLSRDVFPSIIWSWMSPTMNSLARIPPFGGISMSLVSLDVDSKNLGLIYQSPILSSGSKLRCVSVQCHSEIQLKQELRRFINDLTQLEISLASQTSDLSLKSILIGMGSCHIVNETLGKSLSQGLSTNDSIASFLPGNNYPSWLAYTSEGPSVYFQVPEDSDCGMKGITLCVIYSSTLENMATECLASVLVINYTKFTIQIYKRDTVISFNDEDWKSVVSNLEVGDNVEIFVAFGHGLTVKETAVYLIYGQSTAMQIEPSVTVEVEPIPEVAAQLLLDVKTEPLPGVEAQLSPDVKKTEPSPPAVEAQPSPDVKTESPLTVKTEPSPKPNEKIFVRLAKSVRVCFCLNQSPKLRS* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3813 1114 SMART till_3 15 159 IPR000157 GO:0007165
Tpr4g3813 1114 SUPERFAMILY L domain-like 495 831 - -
Tpr4g3813 1114 Gene3D - 183 349 IPR027417 -
Tpr4g3813 1114 MobiDBLite consensus disorder prediction 1047 1086 - -
Tpr4g3813 1114 Pfam TIR domain 16 189 IPR000157 GO:0007165
Tpr4g3813 1114 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 19 1009 - -
Tpr4g3813 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Tpr4g3813 1114 Gene3D - 13 182 IPR035897 -
Tpr4g3813 1114 PRINTS Disease resistance protein signature 219 234 - -
Tpr4g3813 1114 PRINTS Disease resistance protein signature 296 310 - -
Tpr4g3813 1114 PRINTS Disease resistance protein signature 389 403 - -
Tpr4g3813 1114 PRINTS Disease resistance protein signature 627 643 - -
Tpr4g3813 1114 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1009 IPR044974 GO:0006952
Tpr4g3813 1114 Pfam NB-ARC domain 200 424 IPR002182 GO:0043531
Tpr4g3813 1114 Gene3D Ribonuclease Inhibitor 526 877 IPR032675 -
Tpr4g3813 1114 Gene3D - 354 438 IPR042197 -
Tpr4g3813 1114 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 162 IPR035897 -
Tpr4g3813 1114 ProSiteProfiles TIR domain profile. 14 185 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3813 Tpr-Chr4 44171570 44176954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3813 16 744 WRKY Transcription Factor Family AT4G12020 29.733 8.33e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3813 - - mtr:MTR_2g437560 1331.24