Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3812 ATGGTCTTAGGGGTACTCAAAAATGTATTTAAGCTTAATAAAAATAAGATAAGATTAAAGAATGCAGATGAGTTGTCTTCCGGTATCCCGATATTAGTCTTTGTTTGTTCAGCATTTGTGCTTTGTCTTGTAATAATCGTTGACTTGATTGAAATCAATCAATCCATCGAAACAATGTCTCCCCCCTCCCCACCCTCCTCCGATCATCCATGGACCTACGACGTGTTCATAAATTTCAGAGGAGAGGATACTCGTAGATCCTTTGTTTCTATTCTCTATGCTGGACTCTCAAACGCCGGAATCCGCACTTTTCTTGACAATGAAGAACTTATAAAGGGAGAGGAGCTGGGACCAGCACTAAAGAAAGCAATAGAAGAGTCTCACATAGCTATTGTTGTTTTGTCAAAGAACTACGCAGAATCTAGCTGGTGTCTTGATGAACTAGTACACATCATGGAATGTCGCGATTATTATGCTCAGGTGGTTATACCCGTATTTTACGATATTGACCCATCGCATGTCCGTAAGCAGACGGGTAATTTTGGAGAAGCCTTGAAAGTCACAGCAAGGAAAAAACAAGATATGCTGTCCGAGTGGAGGACTGCACTCACCCAAGTTGCAAATCTATCGGGCTTCGATGCCACCACTTTCAGGACTGAAACTGAACTCGTAAGTACACTCATTGAGGACATTTTCACAAAACTAGATAACTCATTCTTGTCTATTACTCAATATCCAATTGGATTGGAGTCCCGCGTGCGACAAATTACCAAGTTTATTGATGATCAATCACGTAAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACCACGGCTAAAGCTATCTACAATCAAATCCATCGTGGATTTAAGGGTAAAACAAGTTACATTGAAAGTATTCGAGAAGTTTGTGATACTAATAGTAGAGGGATTATTCATTTACAACAACAACTTCTTTTAGATCTACTGAAAGAAAAGAAGGAGATTCATAGCATTGCATTGGGGATAAATTATATTGAGAAAAGACTTCGGGGACAAAAGGCTTTTGTCGTACTTGATGATGTGACCAAGTATGAGCAATTACAAGCCCTGTGTCGAAATCCTAAGCTGTTTGGTTCCGGAAGTGTATTGATTATTACAACTAGAGATTTATCCCTTCTGGATTTACATCAAGTTCATTGTGTCTTCAAAATAAAGGAAATGGATGAAAACCAGTCCCTTCAACTTTTCAGTTGTCATGCTTTTCAAAAACCACGTCCTAAAACAAATTTTAGTGAACTTTCTACAGATGTGGTTGCTTATTGCGGAGGATTACCACTGGCTCTTGAAGTCCTTGGATCTTACTTATATAACAGGACAAAACAAGAATGGAGAAGTGTGCTATCAAAATTAAAGAAGATTCCAAATGATCAAGTGCAAGAGAAACTTAGAATCAGCTATGATGGTTTAAAAGATCATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGGCTGTGGACTTCATGCTGGTATTGGAATAGCTGTCCTCATAGATCGGAGCCTCCTAAAAGTTGGAAAGAATAACAAGCTTCAAATGCATGATTTGCTACGTGACATGGGAAGAGAAATTGTTCGCGAAAGTTCACCAAATAAGGCTGCAAATCAGAGTCGATTGTGGCGTTATGAGGATGTGCTGCATGTTTTGTCAAAAGAAAATGGAACAGAAACTGTTGAGGGATTGATTTTGAAGTTGCAAAGAACAGCCAGAATTAGATTCGGTACTCATGCTTTTCAAGAGATGAAAAATCTGAGGCTTTTAAAACTTGATGGTGTTCACCTCAATGGAGATTATGGGTTAATTTCCAAACAACTGATTTGGATTGATTGGCAACGATCTAACTTCAACTTTGTACCGGATGACTTTTATCAGGGAAATCTAGTTGTTTTTGAATTAAAATATAGCAATGTTAAACAAGTTTGGCAGGAAACCAAGTTGTTGGAGAAGCTAAAAGTACTCAATCTCAGTCATTCCAAGTACTTGAGAAGCACCCCTGACTTTTCAAAATTACCAAATTTAGAAAAACTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTACACTCGTCCATTGGAGATCTCAAGAACCTCCTTCTGATAAATTTTAGGGACTGTACAAGTCTTGACAATCTCCCGAGAGAGGTGTATCGATTGATATCAGTGAAAACTCTCATTCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATATTGCAAATGGAATCCTTGACAAAACTGATTGCACCAGATATATCTGTAAAAGAAGGTCCTTTTTCAATAGTAAGATTAAAAAGCATTGCATATATATCTCTATGTGGATATGAAGGATTAACACGTGATATTTTTCCTTCTCTCATCAAGTCTTGGATGTCACCAACCAGAAATTCCCTACCCCGTGTTTCTCCATTTGGAGGCAATTCATTGTCTCGAGTTTCCTTGGATATAGTAGAGAGTAATAATATGGGCTATCAATCACCAATGCCTAGCACCCTTACAAAACTTAGAAGTGTTTGTGTTCGATGCCACTCAGAGAATCAACTAACTCAAGAATTAAGAAGATTTCTTGATGATCTATATGATGTGAATTTTATTGAGTTGGAAACATCACATGGAGCACAAAGCTCAAATCTTTCCTTGAGATCACTTGTGATTGGAATGGGAAGTTCCCAAATATTCATGGATACTCTTAAGAAGAGCTTATCAAAGGGATTGTCAACCAATTCTAGTGGTTCTTTCCTTCCGGGTAATAATGATCCTTCTTGGTTAGCCTATAAATGCGAAGGATCTTCAGTACATTTCCAAGTGCCTGAGAATGGTGATCGCTGCATGAATGGAATAACTTTATGTGTTCTTTATTCATCAACGTCTGAAAACCTGGCAAATGAATGTATCACTTGTGTCTTGATCATTAATTACACACAATTCACTATTCAGATCTACAAGCGAGACACAATAATGTCGTTTAATGATGAAGATTGGCAAGGTGTTATATCAAATTTAGGAGTTGACGACAATGTGGAGATTTATGTAGCTGTTGGTCGTGGATTGAAGGTTGAGGAGACGACTGTCTATCTAATATATGATCAGCCAAATGATATGGAAATTGAACCATCAATTACGGTGCATGTTGAGCCTTATATTGATGCAGAAATGGAGCCGTTACATGATGTGGAAGTGCAACCATCACTTACTCTAGAACTGGAGCAAACACCTGAAATGGAAGTGCAAACATCACCTGATGGGAAAATTGAGCCATCAATTACTGTGGAAGTTGAGCCATCTAGGGGTGCAGAAATGGAGCCTTTACATGAAGTGAAAGTGCAACCATCACCTAATGTGGAAACAGAGTCATCACCTGGAATGGAAGCACAAACATCACTTGATGTGAAAATTGAACCATCACTTATTGTCAAGAATGGGCCATTACTACAGACAAATAGAAAAATCTTCATAAGACGTGCAAAGAGAGTTAGAGAATGTTTATTTTCTTTTTGGAGTAAGTTAGAGAATGTTTCTGCTTGA 3627 0.3805 MVLGVLKNVFKLNKNKIRLKNADELSSGIPILVFVCSAFVLCLVIIVDLIEINQSIETMSPPSPPSSDHPWTYDVFINFRGEDTRRSFVSILYAGLSNAGIRTFLDNEELIKGEELGPALKKAIEESHIAIVVLSKNYAESSWCLDELVHIMECRDYYAQVVIPVFYDIDPSHVRKQTGNFGEALKVTARKKQDMLSEWRTALTQVANLSGFDATTFRTETELVSTLIEDIFTKLDNSFLSITQYPIGLESRVRQITKFIDDQSRKVCMIGIWGMGGSGKTTTAKAIYNQIHRGFKGKTSYIESIREVCDTNSRGIIHLQQQLLLDLLKEKKEIHSIALGINYIEKRLRGQKAFVVLDDVTKYEQLQALCRNPKLFGSGSVLIITTRDLSLLDLHQVHCVFKIKEMDENQSLQLFSCHAFQKPRPKTNFSELSTDVVAYCGGLPLALEVLGSYLYNRTKQEWRSVLSKLKKIPNDQVQEKLRISYDGLKDHMEKDIFLDICCFFIGKNRADVTEILNGCGLHAGIGIAVLIDRSLLKVGKNNKLQMHDLLRDMGREIVRESSPNKAANQSRLWRYEDVLHVLSKENGTETVEGLILKLQRTARIRFGTHAFQEMKNLRLLKLDGVHLNGDYGLISKQLIWIDWQRSNFNFVPDDFYQGNLVVFELKYSNVKQVWQETKLLEKLKVLNLSHSKYLRSTPDFSKLPNLEKLIMKDCPSLSEVHSSIGDLKNLLLINFRDCTSLDNLPREVYRLISVKTLILSGCSKIDKLEEDILQMESLTKLIAPDISVKEGPFSIVRLKSIAYISLCGYEGLTRDIFPSLIKSWMSPTRNSLPRVSPFGGNSLSRVSLDIVESNNMGYQSPMPSTLTKLRSVCVRCHSENQLTQELRRFLDDLYDVNFIELETSHGAQSSNLSLRSLVIGMGSSQIFMDTLKKSLSKGLSTNSSGSFLPGNNDPSWLAYKCEGSSVHFQVPENGDRCMNGITLCVLYSSTSENLANECITCVLIINYTQFTIQIYKRDTIMSFNDEDWQGVISNLGVDDNVEIYVAVGRGLKVEETTVYLIYDQPNDMEIEPSITVHVEPYIDAEMEPLHDVEVQPSLTLELEQTPEMEVQTSPDGKIEPSITVEVEPSRGAEMEPLHEVKVQPSPNVETESSPGMEAQTSLDVKIEPSLIVKNGPLLQTNRKIFIRRAKRVRECLFSFWSKLENVSA* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3812 1208 ProSiteProfiles TIR domain profile. 71 235 IPR000157 GO:0007165
Tpr4g3812 1208 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 75 1063 IPR044974 GO:0006952
Tpr4g3812 1208 Pfam TIR domain 73 241 IPR000157 GO:0007165
Tpr4g3812 1208 SUPERFAMILY Toll/Interleukin receptor TIR domain 64 212 IPR035897 -
Tpr4g3812 1208 Pfam NB-ARC domain 250 483 IPR002182 GO:0043531
Tpr4g3812 1208 Gene3D - 67 238 IPR035897 -
Tpr4g3812 1208 Gene3D - 405 496 IPR042197 -
Tpr4g3812 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 500 IPR027417 -
Tpr4g3812 1208 Gene3D - 239 400 IPR027417 -
Tpr4g3812 1208 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 75 1063 - -
Tpr4g3812 1208 SUPERFAMILY L domain-like 545 884 - -
Tpr4g3812 1208 Gene3D Ribonuclease Inhibitor 584 924 IPR032675 -
Tpr4g3812 1208 SMART till_3 72 209 IPR000157 GO:0007165
Tpr4g3812 1208 PRINTS Disease resistance protein signature 269 284 - -
Tpr4g3812 1208 PRINTS Disease resistance protein signature 347 361 - -
Tpr4g3812 1208 PRINTS Disease resistance protein signature 440 454 - -
Tpr4g3812 1208 PRINTS Disease resistance protein signature 678 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3812 Tpr-Chr4 44150778 44156370 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3812 680 801 WRKY Transcription Factor Family AT4G12020 34.426 1.33e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3812 - - mtr:MTR_8g011710 1247.26