Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3811 ATGTCTTCCTCCTCTGACGATCTACTACTACCGGGGTTTAGGTTCCACCCGACAGAGGAGGAACTTATTTCTTTTTATTTGAGAAACAATTTAAATGGCAAGAATCCATTTAAGTCCGATCATCCATGGATATACGATGTGTTCATAAGTTTCAGAGGGGAGGATACTCGCGCCAATTTCGTTTCTCATCTATATGCTGCACTCTCTAACGCGGGAATCTACACTTTTCTTGACGATAAGAAGCTTAAAAAGGGCAAAAAGCTGGGAACACAACTAAAGAAGGCAATAGAAGGGTCTAGGATATGTATTATTGTTCTCTCACCAAAATATGCAGGATCTAGCTGGTGTCTTGATGAACTGGTACACATCATGGAATGCCAAAAAACTTATGGCCAGGAGGTTATTCCCCTATTCTACTATGTTAATCCGTCGTCTGTCCGTAAACAGACAGGTGATTTTGGAAAAGTCTTGAAACTTACTGGTAACGAGAAGATGAGTAAGGCAAGAAAAACCGAAGCTCTCATGTCCAAGTGGAGGAAGGCACTTAACGATGTTGCAAATCTATCAGGCTTCGATGCCTCCAATTCAAGGAATGAAGCTGAACTGATAAAGAAACTTACTGAGGACATTTCGACAAAACTAGATATCTCATTGTTGTCTATTACTAAATATCCGATTGGATTGAAATCCTGGGTGCAAACAGTCACCAAGTTTATTGATGATCAATCAAGCAAAGTCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGGAAAACAACGCTGGCCAAAGCCATCTACAATCAAATCCATCGTAGATTCGAGGGTAGAACCAGTTTCATTGAAAGTATTCGAGAAGTTTGTGATAATAGTAATAATAATAGTAAAGGGATTACTCATTTACAACAACAACTTCTTTCCGATCTCCTCAAAATAAAGCAGAAGATTCATAGCATTGCATCGGGGATAACTAAGATCGAGACAAGACTTCGGGGGCAAAATGCTTTCATTGTATTCGATGATGTGACCAAAGCAGATCAATTAGAAAATCTGTGTGCAAATCCTGAGTTGTTTGGTTCAGGAAGTGTATTGATTATTACAACTAGAGATCTACACCTTCTCAAGTCACTTGGTGCTGACCGTGTCTTCACAATGACAGAAATGGACGAAAATCAGTCCTTTGAACTTTTCAGTTGGCATACTTTTCGACAACCAAGTCCTAAAGAAGAGTTTAGTGAACTCTCTAGAAATGTAGTTGCTTATTGCGGAGGATTACCACTGGCTCTTGAAATCCTTGGATCTTACTTATATAAGAGGACGGAACAAGAATGGAAAAGTGCCCTATCAAAATTAGAGAAGATTCCCAACAATCAAGTGCTGCAGAAACTGAGAATCAGCTACGACGGTTTAGAAGATCATACGATAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAAGAGAGCTTATGTTTCAGACATACTTAATGGCTGTGGACTTCATGCTGATATTGGAATAGCTGTCCTCATAGATCGGAGCCTCCTAAAAGTTGAAAAGAATAACAAGCTCCGAATGCATGATTTGCTACGTGACATGGGAAGAGCAATTGTTGGCGAAAGTTCACCAAAAGAGCCTGCAAAGCATAGTCGATTGTGTTTTCCTGAGGATGTGCTGGAAGTTTTGTCAAATGAAACTGGAACAGAAACTGTTGAGGGATTGAATTTAAAGTTGGAAAGAACAGCCAGAATTAGATTCGGTACTAAAGCTTTCCAGGAGATGAAAAAGCTGAGGCTTTTAAAACTCGATGGTGTTCACCTCATTGGAGATTATGGGTTAATTTCCAATCAACTGAGATGGGTTGATTGGCAACGATCTAACTTCAACTTTATACCGAATGACTTCGAACTAGGAAATCTAGTTGTTTTAGAATTAAAATATAGCAATGTTATACAAGTTTGGCAGGAGACCAAGTTGTTGGAGAAGCTAAAAGTACTCAATCTCAGTCATTCCAAGTACTTGAGAAGCACCCCTGACTTTTCAAAATTACCAAATTTAGAGAAACTCATTATGAAGGATTGTCCAAGTTTGTCCGAGGTACACTCGTCCATTGGAGATCTCAAGAACCTCCTTCTGATAAATTTTAGGGACTGTACAAGTCTTGACAATCTCCCAAGAGAGGTCTATCAATTGATATCAGTGAAAACTCTCATTCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATATTGCAAATGGAATCCTTGACGACTCTAATTGCAACCAATTCTGGTGTTAAAGAAGTGCCCTATTCAATATTAAGATCAAAAAGCATTGCATATATATCTCTATGTGGATATGAAGGATTAACACGTGATGTTTTTCCTTCTCTCATCAAGTCTTGGATGTCACCAACCATAAATTCCCTACCCCATGTTTCTCCATTTGTAGGCAATTCATTGTCTCGAGTTTCCTTGGATATAGTAGAGAGTAATAATATGGGCTATCAATCACCAATGCCTAACATCCTTACAAAACTTCGAAGTGTTTGGGTTCAATGCCACTCAGAGAATCAATTAACTCGAGAATTAAGAAGATTTCTTGATGATCTAAATGATTTGAATTTTGTTGAATTGGAAACAACATCACATGGACCACTGATCTCAAATCTCTGCTTGAGATCACTTGTGATTGGAATGGGGAGCTCCCAAATAGTCATCGATACTCTTGGGAAGACCTTATCACAGGGATTGTCAACTAATGATTCTACTGCTTCTTTCCTTCCGGGTGATAATTATCCTTCTTGGTTAGCCTATAAGTGCAAAGGATCTTCAGTACATTTCAAAGTGCCTGAGAATAGTGATCGCTGCATAAAGGGAATAGCTTCATGTGTTCTTTATTCATCAACACCCGAACAACCGGCAAATGAATGTCTCACTAGTGTCTTGATCATTAATTACACAAAATTCACTATCCAGATTTACAAGCGAGAAACAGTAATGTCGTTCAACGATGAAGATTGGCAAGGTGTAATATCAACTTTAGGATTTGGTGACAGTGTGGAGATTTTTGTAGCTATTGGTCATGGATTGGATGTTAAGGAGACGGCTGTCTATCTAATATATGATCCATCTACAAATGCAAAATTGGAGCCATAG 3171 0.3866 MSSSSDDLLLPGFRFHPTEEELISFYLRNNLNGKNPFKSDHPWIYDVFISFRGEDTRANFVSHLYAALSNAGIYTFLDDKKLKKGKKLGTQLKKAIEGSRICIIVLSPKYAGSSWCLDELVHIMECQKTYGQEVIPLFYYVNPSSVRKQTGDFGKVLKLTGNEKMSKARKTEALMSKWRKALNDVANLSGFDASNSRNEAELIKKLTEDISTKLDISLLSITKYPIGLKSWVQTVTKFIDDQSSKVCMIGIWGMGGSGKTTLAKAIYNQIHRRFEGRTSFIESIREVCDNSNNNSKGITHLQQQLLSDLLKIKQKIHSIASGITKIETRLRGQNAFIVFDDVTKADQLENLCANPELFGSGSVLIITTRDLHLLKSLGADRVFTMTEMDENQSFELFSWHTFRQPSPKEEFSELSRNVVAYCGGLPLALEILGSYLYKRTEQEWKSALSKLEKIPNNQVLQKLRISYDGLEDHTIKDIFLDICCFFIGKKRAYVSDILNGCGLHADIGIAVLIDRSLLKVEKNNKLRMHDLLRDMGRAIVGESSPKEPAKHSRLCFPEDVLEVLSNETGTETVEGLNLKLERTARIRFGTKAFQEMKKLRLLKLDGVHLIGDYGLISNQLRWVDWQRSNFNFIPNDFELGNLVVLELKYSNVIQVWQETKLLEKLKVLNLSHSKYLRSTPDFSKLPNLEKLIMKDCPSLSEVHSSIGDLKNLLLINFRDCTSLDNLPREVYQLISVKTLILSGCSKIDKLEEDILQMESLTTLIATNSGVKEVPYSILRSKSIAYISLCGYEGLTRDVFPSLIKSWMSPTINSLPHVSPFVGNSLSRVSLDIVESNNMGYQSPMPNILTKLRSVWVQCHSENQLTRELRRFLDDLNDLNFVELETTSHGPLISNLCLRSLVIGMGSSQIVIDTLGKTLSQGLSTNDSTASFLPGDNYPSWLAYKCKGSSVHFKVPENSDRCIKGIASCVLYSSTPEQPANECLTSVLIINYTKFTIQIYKRETVMSFNDEDWQGVISTLGFGDSVEIFVAIGHGLDVKETAVYLIYDPSTNAKLEP* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3811 1056 SUPERFAMILY Toll/Interleukin receptor TIR domain 39 191 IPR035897 -
Tpr4g3811 1056 PRINTS Disease resistance protein signature 248 263 - -
Tpr4g3811 1056 PRINTS Disease resistance protein signature 329 343 - -
Tpr4g3811 1056 PRINTS Disease resistance protein signature 422 436 - -
Tpr4g3811 1056 PRINTS Disease resistance protein signature 660 676 - -
Tpr4g3811 1056 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 47 1043 - -
Tpr4g3811 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 482 IPR027417 -
Tpr4g3811 1056 SUPERFAMILY L domain-like 527 900 - -
Tpr4g3811 1056 Pfam NB-ARC domain 232 455 IPR002182 GO:0043531
Tpr4g3811 1056 Pfam TIR domain 45 219 IPR000157 GO:0007165
Tpr4g3811 1056 Gene3D - 219 382 IPR027417 -
Tpr4g3811 1056 Gene3D - 42 218 IPR035897 -
Tpr4g3811 1056 Gene3D - 387 471 IPR042197 -
Tpr4g3811 1056 Gene3D Ribonuclease Inhibitor 563 902 IPR032675 -
Tpr4g3811 1056 SMART till_3 44 188 IPR000157 GO:0007165
Tpr4g3811 1056 ProSiteProfiles TIR domain profile. 43 214 IPR000157 GO:0007165
Tpr4g3811 1056 SUPERFAMILY NAC domain 9 38 IPR036093 GO:0003677|GO:0006355
Tpr4g3811 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 1043 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3811 Tpr-Chr4 44122987 44128227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3811 45 777 WRKY Transcription Factor Family AT4G12020 28.571 1.38e-67 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr4g3811 NB-ARC 1.7e-32 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3811 - - mtr:MTR_2g437560 1218.37