Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3808 ATGTCATCTTCCTCCGATCATCCTTCATACATCCACGACGTGTTCTTAAATTTCCGAGGGGAGGATACTCGGGACAGATTGATTTCTCATCTCTATGCAGCACTATCAAATGCAGGAATCAACACTTTTCTTGACGACATGAACCTTAAAATGGGAGATGAATTGCCAGAAATATTGGACGCAATAGAATTGTCTCGTATTTCTGTTATTGTTTTCTCCAAAGGATATACTGAATCTAGTTGGTGTCTTTCTGAACTTGTAAAAATTATGGAATGCCACAGTATTCATAATCAAGTTGTTGTACCTCTGTTTTATGATGTTGACCCATCAGTTGTCCGTTATCAGAATGGTGATTTTGGAAAAGCTTTAGAAGCAAATGCTAACAAACAATACTTGAGAACAGATCTATTGTCCAACTGGAGGAATGCACTGATTAAAGCTGCAAATCTATCCGGCTGGGATGCCAACAAGTTCAGGAATGAATCTGAACTAGTGAAGCAAATTGTTGAAGATGTTTTGGCAAAACTAGACAACACATTCTTGTCTATTACCGAATTTCCAGTTGGATTGGAATCCCATGTGCAAAAAGTGACTGACTTTATTGATCAATCTAACAAAGTTTGTATGGTGGGGATATGGGGAATGGGGGGATCTGGCAAAACAACCACAGCCAAAGCTATCTACAATCGAATCCATCGTAACTTCGAGGGTAGAACAAGTTTCATTGGAAATATTCGAGAGATTTGTGAAAATGATAGTAGAGGGATTATTCATATACAACAACAACTTCTTTCTGATGTTTTGAAAACAAATGAGAAGATACATAGCATTGAATTGGGGAAAACTAAGATCGAGAAAACACTTCGGGGAAAAAAGGCTTTTATCGTACTCGATGATGTGACCAAGTCTGAGCAATTAGAAGCCCTGTGTCCAAATCCTAAGTTGTTTCGTTCAGGAAGTGTAATGATTATTACAACTAGAGATGCACGCCTTCTCAATTCACTTGGTGTTAAACACGTCTTCACCATGACAGAAATGGACGAAAACCAATCCCTAGAACTTTTCAGTTGGCATGCTTTTCGACAACCAAGTCCTAGAGAAGATTTTAGTGACCTCTCTAGAAATGTAGTTGCTTATTGCGGAGGATTACCTCTGGCACTTGAAGTCCTTGGATCTTACTTAACTGGGAGGACGGAACAAGAATGGAGAAGTGCGCTATTAAAATTAGAGAAAATTCCCAACGATCAAGTGCAACAGAAACTGAGAATCAGCTACGATGGTTTAGAAGATTATACATTAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAACAGAGCTGATGTTACAGAGATACTTAATGATTGTGGGTTTTATGCTGATATTGGAATAGCTGTACTCATAGAGCGGAGCCTCGTAAAAGTTGAAAAGAAGAATAACAAGCTTCAAATTCATGATTTGCTACGGGACATTGGAAGAGCAATTGTTGGAGAAAGTTCACCAAAAGAACCCGAAAAGCATAGTCGATTGTGGTTTCCAGATGATGTGGTGGAAGTTTTGACAAAATATACTGGAACAGAAACTATAGAAGGATTGATTTTGAAGTCACAAAGAATTGACAAATTTTGTTTCAGTACTAATTCTTTCAAAAAGATGAAGAAACTAAGACTTTTACAACTTGATTGTGTTGACCTCACTGGGGATTTTGGGTATCTTTCCAAACAACTTAGATGGGTCAATTGGCAACGATCTACCTTCAACTATATACCTAATGACTTTGATTTGGGAAATCTCATTGTTTTTGAATTAAAATATAGCAATGTTGAACAGGTTTGGAAGGAAAACAAGTTGTTGCAGAAGCTAAAAATTCTCAATCTTAGTCATTCTAAGCACTTGAAAAGCACCCCTGATTTTTCAAAATTACCGAACCTAGAAAAGCTCATTATGAAGGATTGTCAAAGTTTGTCTGAGGTACACTCGTCTATTGGAGATCTCAAGAATATTCTTCTGATAAATTTGAAGGACTGTACAAGTCTTGGCAATCTCCCTACAGAGATATATCAATTGGCATCAGTGAAAATTCTGATCCTTTCTGGTTGTTCAAATATTGACAAATTGGAAGAAGATATAGGGAAAATGAAATCCTTGACAACTATAGCTGCAAAAAATACTGGTGTCAAACAAGTGCCGGTTTCGATAGTTAGATCAAAAAGCATTAGATATATATCCCTGTGTGGATATGAAGGATTATCACGTGATGTTTTTCCTTCTATCATTAGATCTTGGATGTCACCAACAATGAATTCCTTAGCACATATTCCTCCGTTTGGTGGCATGTCAACGTCTCTTGTTTCCTTGAACGTAGATAGTAGAAGTTTGGGTTTGGTCTATCAATCACCATTACTTGGCAGCGGTTCAAAACTTAGAAGTATTTCGATACAATGTGACTCAGAGAGTCAACTGAAACAAGAATTCAAAAGATTTCTTGATGATCTATATGGTGCAGGTCTTAATGAAGCGGGAACATCACATGCATCACAAATTTTGGTTCTTTCCTTGAGATCTCTTTTGATTCGAATTGGAAGTTGTGACATTGTTATCGATAATCTTGGGAAGAGCTTATCACAGGGAATGACAACCAATTCTATTGATTCTTTCCTTCTGGGTGACAATTATTGTTCTTGGTTAGCCTATAAATGTGAAGGACCTTCGGTACTTTTTCAAGTGCCTGAGGATAGTGATCGTTGCATGAAAGGAATAACTTTATGTGTTTTTTATTCATCAACACATGAAAACTTGGCAAATGAATGTCTCCCTAGTGTTTTAATCATTAATTACACAAAATTCACTATCCAGATTTACAAGCGAGACATAGTAATGTCGTTTAATGATGAAGATTGGCAAAGTGTATTATCAAATTTAGGAGCTGGTGACAATGTGGAGATTTTTATAGCTATTGGGCACGGGTTTGCTGTTAAGGAGACGACTGTCTATCTAATATATGAACAGTCAAATGATATGGAAGTGCAACCATCTGTTGTTAATAAGCCACCTATTAGATATGTATATGTCAGGTGCAGGCGGAAATTAAATTAG 3105 0.3691 MSSSSDHPSYIHDVFLNFRGEDTRDRLISHLYAALSNAGINTFLDDMNLKMGDELPEILDAIELSRISVIVFSKGYTESSWCLSELVKIMECHSIHNQVVVPLFYDVDPSVVRYQNGDFGKALEANANKQYLRTDLLSNWRNALIKAANLSGWDANKFRNESELVKQIVEDVLAKLDNTFLSITEFPVGLESHVQKVTDFIDQSNKVCMVGIWGMGGSGKTTTAKAIYNRIHRNFEGRTSFIGNIREICENDSRGIIHIQQQLLSDVLKTNEKIHSIELGKTKIEKTLRGKKAFIVLDDVTKSEQLEALCPNPKLFRSGSVMIITTRDARLLNSLGVKHVFTMTEMDENQSLELFSWHAFRQPSPREDFSDLSRNVVAYCGGLPLALEVLGSYLTGRTEQEWRSALLKLEKIPNDQVQQKLRISYDGLEDYTLKDIFLDICCFFIGKNRADVTEILNDCGFYADIGIAVLIERSLVKVEKKNNKLQIHDLLRDIGRAIVGESSPKEPEKHSRLWFPDDVVEVLTKYTGTETIEGLILKSQRIDKFCFSTNSFKKMKKLRLLQLDCVDLTGDFGYLSKQLRWVNWQRSTFNYIPNDFDLGNLIVFELKYSNVEQVWKENKLLQKLKILNLSHSKHLKSTPDFSKLPNLEKLIMKDCQSLSEVHSSIGDLKNILLINLKDCTSLGNLPTEIYQLASVKILILSGCSNIDKLEEDIGKMKSLTTIAAKNTGVKQVPVSIVRSKSIRYISLCGYEGLSRDVFPSIIRSWMSPTMNSLAHIPPFGGMSTSLVSLNVDSRSLGLVYQSPLLGSGSKLRSISIQCDSESQLKQEFKRFLDDLYGAGLNEAGTSHASQILVLSLRSLLIRIGSCDIVIDNLGKSLSQGMTTNSIDSFLLGDNYCSWLAYKCEGPSVLFQVPEDSDRCMKGITLCVFYSSTHENLANECLPSVLIINYTKFTIQIYKRDIVMSFNDEDWQSVLSNLGAGDNVEIFIAIGHGFAVKETTVYLIYEQSNDMEVQPSVVNKPPIRYVYVRCRRKLN* 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3808 1034 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Tpr4g3808 1034 Gene3D - 345 429 IPR042197 -
Tpr4g3808 1034 Gene3D - 181 342 IPR027417 -
Tpr4g3808 1034 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1003 - -
Tpr4g3808 1034 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1003 IPR044974 GO:0006952
Tpr4g3808 1034 SUPERFAMILY L domain-like 487 817 - -
Tpr4g3808 1034 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 153 IPR035897 -
Tpr4g3808 1034 SMART till_3 11 150 IPR000157 GO:0007165
Tpr4g3808 1034 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Tpr4g3808 1034 Gene3D Ribonuclease Inhibitor 518 843 IPR032675 -
Tpr4g3808 1034 Pfam TIR domain 12 184 IPR000157 GO:0007165
Tpr4g3808 1034 Gene3D - 7 180 IPR035897 -
Tpr4g3808 1034 PRINTS Disease resistance protein signature 209 224 - -
Tpr4g3808 1034 PRINTS Disease resistance protein signature 287 301 - -
Tpr4g3808 1034 PRINTS Disease resistance protein signature 380 394 - -
Tpr4g3808 1034 PRINTS Disease resistance protein signature 619 635 - -
Tpr4g3808 1034 Pfam NB-ARC domain 191 419 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3808 Tpr-Chr4 44067826 44085491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3808 1 736 WRKY Transcription Factor Family AT4G12020 28.892 4.53e-69 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3808 - - mtr:MTR_2g437560 1236.86