Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3807 ATGGGTTATTATTCTTCTTCTTCTTTCAATCCTCCATGGATACACGACGTGTTCATCAACTTCAGAGGGAAAGACACGCGCCAAAGCTTTGTTTCTCATCTGGATGCCGCCCTTACAAATGCAGGAATCAACACATACCTCGACCACCAGCTTCACAAGGGAACAGAGCTTGGACCAGAACTATGTAGAGCAATACAAGGGTCTCGTATATCTATCCTTGTTTTCTCCAAAAACTACACTGAATCTAGTTGGTGTCTTAATGAGCTGCAAAACGTCATGGAGTGCCACATGACTCATCGACAATTAGTTATCCCTGTATTTTATGATGTTGACCCTTCGGTTGTGCGCCACCAGAAAGGTGATTTTGGAATGGCTTTGAGGGCTACTGCTAAGTTGCACTCACCAAAGCTGGTCATTTGGAAGAGTGCACTCACTCAAGCTGCTAATTTGTCTGGTTGGGATGTCACCAAATGCAGTAATGAAAACAGTGTTGTGAAGGAAATTGTTGACCAAGTTGTGAAAAAACTTGAAAAAAGACACTTAACTATCCCAGATTTTCCAGTTGGACTGGAATCCCACACGGAACAGTTGATTCAGTTTTTAAGACAAAATACAAGAGGAGTTCGTTTATTAGGGATTTGGGGAATGGGGGGGATTGGCAAAAGCACCATTGCCAAAGCTGTCTACAATAATCTTTGTTATGAATTTGAAGAACAAAGCTTCCTTGCTAATATTAGAGAAGTTTGGGAGAAAGATAGCGGCCGAATCGGTTTACAAGAACAACTTCTTTCAGATATCCTCAAAACAAGAAGGATAAAGGTGCATAGTCTTGAGTGGGGAAAAGCTATGATCAAGGAACGACTTTGCACAAAACGGGCACTTGTTGTACTTGATGATGTTAGTGAGTTTGAGCAATTCAGTGCACTGTGCGGAAATAGAAATGGGATTGGTCCGGATAGTATAATAATCATCACAACAAGAGATGTTCGTCTACTAGATATTCTTGGAGTTGACTTTATTTATGAAGCCGATGGATTGGATCTAGATGAGTCCCTTGAGCTTCTTAGTTGGCATGCTTTTAGGGAGGCAAGTCCAACAAAAGGCTTCCTTATTCTCTCAAGAGATGTAGTTGCCTATTGTGGCGGACTACCACTAGCTCTTGAAGTCCTTGGATCTTACTTATTCATGAGAAGAAAACAAGAGTGGCACAGTGTATTATCAAAGCTAAAAAAGATACCCAATAATCAAATACACGATAAACTAAAAATAAGCTTCAATGGTTTAAGGGATCGTATGGAGAAGGATATATTTCTTGATATCTGTTGTTTCTTTATCGGTGAGGATAGAGCTTATGTTACACAGATACTAAATGGTTGTGGACTTCATGCTGATATTGGCTTAACAGTGCTGATAGAGAGAAGCCTCATAAAAGTTGAAAAGAATAATAAGCTTGGAATGCATGATTTGCTACGAGACATGGGAAGAGAAATTGTTCGTGAAAGTTCACCTGAGGAGCCTGAGAAGCGTAGTCGATTGTGGTGTCATGAAGATGTAGTTGATGTATTGACTTCTGTCACAGGGACAAAAGCCATTGAAGGATTGGTAATGAAGTTTCAAAGGACCAGTAGCGTTTGCTTCGATACAATTGCTTTTGAGAAAATGAAGAGATTGAGGTTGTTGCAACTTGATCATGTACAACTCAACGGAGATTATGAGTGTTTTCCGAAGCACCTGAGATGGCTGTCTTGGCACGGATTTCCTTTAAAATACACACCGGAAAACTTATATCAGAAAAATCTTGTTGCTATGGACTTGAGACACAATAATCTTACAAAAGTTTGGAAGAAGCCTCAGTTGCTAGAGGGACTGAAGATCCTAAATCTTAGTCATTCAATGTACTTGACAAACACCCCAGACTTTTCAAAATTACCAAACCTAGAAAAACTCATTATGAAGGATTGTCAAAGTTTGTCTGAAGTACACTCGTCCATTGGAGTTCTCAAGAATATTCTTCTGATAAATTTGAAGGATTGTACAAGTCTTGGCAATCTTCCTATAGAGATATATAACTTGGCATCAGTTCAAACTCTGATCCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGGGAAAATGGAATCCTTGACAACTCTAATTGCAAAAGATACTGGTGTCAAACAAGTTCCAGTTTCGATAGTTAGATCAAAAAACATTAGATATATATCCCTATGTGGATATGAAGGATTATCACGTGATATTTTTCCTTCTATCATTAGATCTTGGATGTCACCAACAATGAATTCCTTAGCACATATTCCCCCTTTTGGTGGCATGTCAACGTCTCTTGTTTCCTTGAATGTAGATAGTGGAAATATGGGTTTGGTCTATCAATCACCATTACTTGGCAGCGGTTCAAAACTTAGAAGTGTTTCGGTACAATGTGACTCAGAGATTCAACTAAAACAAGAATTAAGAAGATTTCTTGATGATCTATATGGTGCAGGTCTTACTGAAGTGGGAGCATCACATGCCTCACAAATTTCGGATCTTTCCTTGAGATCCCTTTTGTTTGGGATCGGAAGTTGCCACATGTTCATTGATATTCTTGGGAAGAACTTATCACAGGGATTGTCAGATTACGATTCTAGAGATTCGTTTCTTCCGGGCGACAATTATCCCTCATGGTTAGCCTATAAATGTGAAGGACCTTCAGTACCTCTTCAAGTGCCCGAGAACTGTGATTTATCCATGAAGGGAATAACTTTATGTGTTATTTATTCATCAACACATGAAAACCTAACAACTGAATGTCTCCCTAGTCTCTTGATCATTAATTACACAAAATTCACTATCCAGATTTACAAGCAAGACACGGTAAGGTCATTCAATGGTGAAGATTGGCAAGGTATAATATCAAATTTAGGAGTTGGTGATAACTTGGAGATTTTTGTAGCTATTGGGCATGGATTTACTGTTAAGGAGACGGCTGTCTATCTAGTATATGACCAGTCAAATGCTATGGAAATTGAGCAATCAAATACTATGAAAGTTGTCCCATCAACTGATGTGCAAATGGAGCCATCAACTGAAGTGAAAGTACAACCATCACCTAATGTGAAAACGGCGCCATCAGCTGAAGTGGAAGTACAGTCATCACCTGATGTGAAAATGGAACCATCACTTGTTGTAGAGAATGAACAATTCCCGAACACAGATAGAAAAATCTTTACAAGATTTGCTAAGAGAGTGGGAGAATGTTTATGCTTGAACCAGAATTGA 3288 0.3899 MGYYSSSSFNPPWIHDVFINFRGKDTRQSFVSHLDAALTNAGINTYLDHQLHKGTELGPELCRAIQGSRISILVFSKNYTESSWCLNELQNVMECHMTHRQLVIPVFYDVDPSVVRHQKGDFGMALRATAKLHSPKLVIWKSALTQAANLSGWDVTKCSNENSVVKEIVDQVVKKLEKRHLTIPDFPVGLESHTEQLIQFLRQNTRGVRLLGIWGMGGIGKSTIAKAVYNNLCYEFEEQSFLANIREVWEKDSGRIGLQEQLLSDILKTRRIKVHSLEWGKAMIKERLCTKRALVVLDDVSEFEQFSALCGNRNGIGPDSIIIITTRDVRLLDILGVDFIYEADGLDLDESLELLSWHAFREASPTKGFLILSRDVVAYCGGLPLALEVLGSYLFMRRKQEWHSVLSKLKKIPNNQIHDKLKISFNGLRDRMEKDIFLDICCFFIGEDRAYVTQILNGCGLHADIGLTVLIERSLIKVEKNNKLGMHDLLRDMGREIVRESSPEEPEKRSRLWCHEDVVDVLTSVTGTKAIEGLVMKFQRTSSVCFDTIAFEKMKRLRLLQLDHVQLNGDYECFPKHLRWLSWHGFPLKYTPENLYQKNLVAMDLRHNNLTKVWKKPQLLEGLKILNLSHSMYLTNTPDFSKLPNLEKLIMKDCQSLSEVHSSIGVLKNILLINLKDCTSLGNLPIEIYNLASVQTLILSGCSKIDKLEEDIGKMESLTTLIAKDTGVKQVPVSIVRSKNIRYISLCGYEGLSRDIFPSIIRSWMSPTMNSLAHIPPFGGMSTSLVSLNVDSGNMGLVYQSPLLGSGSKLRSVSVQCDSEIQLKQELRRFLDDLYGAGLTEVGASHASQISDLSLRSLLFGIGSCHMFIDILGKNLSQGLSDYDSRDSFLPGDNYPSWLAYKCEGPSVPLQVPENCDLSMKGITLCVIYSSTHENLTTECLPSLLIINYTKFTIQIYKQDTVRSFNGEDWQGIISNLGVGDNLEIFVAIGHGFTVKETAVYLVYDQSNAMEIEQSNTMKVVPSTDVQMEPSTEVKVQPSPNVKTAPSAEVEVQSSPDVKMEPSLVVENEQFPNTDRKIFTRFAKRVGECLCLNQN* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3807 1095 Gene3D - 346 429 IPR042197 -
Tpr4g3807 1095 SMART till_3 14 150 IPR000157 GO:0007165
Tpr4g3807 1095 Gene3D - 178 337 IPR027417 -
Tpr4g3807 1095 PRINTS Disease resistance protein signature 210 225 - -
Tpr4g3807 1095 PRINTS Disease resistance protein signature 287 301 - -
Tpr4g3807 1095 PRINTS Disease resistance protein signature 380 394 - -
Tpr4g3807 1095 PRINTS Disease resistance protein signature 689 705 - -
Tpr4g3807 1095 Pfam TIR domain 15 180 IPR000157 GO:0007165
Tpr4g3807 1095 Gene3D - 12 177 IPR035897 -
Tpr4g3807 1095 Pfam NB-ARC domain 191 415 IPR002182 GO:0043531
Tpr4g3807 1095 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Tpr4g3807 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 440 IPR027417 -
Tpr4g3807 1095 SUPERFAMILY L domain-like 486 815 - -
Tpr4g3807 1095 Gene3D Ribonuclease Inhibitor 518 858 IPR032675 -
Tpr4g3807 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Tpr4g3807 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 1005 IPR044974 GO:0006952
Tpr4g3807 1095 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3807 Tpr-Chr4 44050767 44064356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3807 15 735 WRKY Transcription Factor Family AT4G12020 31.200 2.26e-84 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3807 - - mtr:MTR_8g011710 1605.5