Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3806 ATGTCTTCCTCCTCAGATCATCCATGGATCTATGACGTGTTCATAAGTTTCAGAGGAAAAGATACTCGTCAGACCTTTGTTTCTCATCTCTATGCTGGACTCTCAAACGCGGGAATCCACACTTTTCTTGACGATGAGAAGCTTAGAAAAGGAAATAAGCTGGGAGCAGAACTAGAGAGAGCAATAGAAGGGTCTAAGATATCTATTGTGGTTCTCTCACCGAACTATGCAGGATCTAGCTGGTGTCTTAACGAACTGGTACACATCATGGACTGCCAAAAAACTTATGGCCAGCTGGTTTTACCCGTATTTTACTATGTTGACCCGACGTTTGTCCGTAAGCAGACTGGTGAATTTGGAAAAATCTTGCAAGTTACAGCAAGAAAAAAAGAAGTTTGCATGTCCAAGTGGAGGACGGCACTCAATGATGTTGCAAATCTAGCCGGTTGGGATTCCAAGACTATCAGGAATGACGGTGAACTGGTGAAGAAAATTGTTAAGGACATTTTGAAAGAAATTAATGTCATGACATCGATGTCAATTACTAAATTTCCGGTTGGATTGGAATCCCGGGTACAAAAAGTGACCAATTTTATTGATGATCAATCAAGCAAAGCCTGTATGATAGGGATATGGGGAATGGGTGGATCCGGAAAAACAACTATGGCCAAAGCTATCTACAATCAAATCCATTTTAAATTCAAGGGCAGAACAAGTTTCGTTGAAAGTATTAGAGAAGTTTGTGATAATAATAATAGAGGGATTATTCATTTACAAGAACAACTTCTTTCAGATCTCCTCCAAATAAAACAGAAGATTCACAGCATTGCGTTGGGGATAACTAAGATTGAGTCAAGACTTCGGGGGCAAAAGGCTTTGGTCGTACTTGATGATGTGACCAAGTCTGAACAATTGAAAGCCCTGTGTGCAAATCCTAAGATGTTTGGTTCTCAAAGTGTATTGATTATTACAACTAGAGATCTACGCCTTCTCAATTCACTTGGTGCTGACCATGTCTTCACAATGACGGAAATGGACAAAATACAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTCGACAACCAAATCCTAGAGAAGATTTTACAAAACTCTCTAGAAAAGTAGTTGCTTATTGTGGAGGATTACCACTGGCTCTTGAAGTCCTTGGATCTTATTTATCTGAGAGAACAAAACAAGAATGGAAAAGTGCACTGTCAAAATTAGAGAAAATTCCCAATGATCAAGTGCAAGAGAAACTGAGAATTAGCTACGATTGTTTAGAAGATCATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTCATTGGAAAGAATAGAGCTGATGTTACGGCGATACTTAATGGTTGTGGACTTCATGCGGATATTGGAATAGCTGTCCTCATAGAGCGCAGCCTTGTAAAAGTTGAAAAGAATAACAAGCTTTGGATGCATGATTTGCTACGAGACATGGGAAGAGCAATTGTTGGTGAAAGTTCAGCAAAAGAGCCTGCAAAGCATAGCCGACTGTGGTTTCGTGAGGATGTGCTGGATGTTTTGTCAAAAAATACTGGAACAGAAACGGTTGAGGGATTGATTTTGAAGTTGCAAAGAACAGGAAAAGTTAGCTTCAGTACTAATGCTTTCCAGGAGATGAAAAAACTGAGGCTTTTAAAATTTGATTGTGTTGACCTTATCGGAGATTATGGGTTAATTTCCAAACAACTGAGATGGGTTGATTGGCAACGGTTCACCTTCAAATTTATACCGAATGACTTTGATCAAGGAAATCTAGTTGTTTTAGAATTAAAATATAGCAATGTTAGACAAGTTTGGCAGGAGACCAAGATGTTGGAGAAGCTAAAAATTCTCAATCTCAGTCATTCCAGGCACTTGAAAAGCACCCCTGACTTTTCAAAAATACCGAATCTAGAAAAGTTAATTATGGAGGATTGCCAAAGTTTGTCAGAGATACACCCGTCCATCGGAGATCTCAAGAACCTCCTTCTGATAAATTTGAGGGACTGTACAAGTCTTGACAATCTCCCGAGAGAGGTGTATCGATTGATATCAGTGAAAACTCTCATTCTTTCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAAATGGAATCCTTGACAACTCTAATTGCAGCAAATACTGGTGTCAAACAAGTACCATTTTCAATAGTAAGATTACAAAGCATTGGATATATATCTCTATGTGGATATGAAGGATTATCGCGTGATATTTTTCCTTCTCTCATTCAGTCATGGATGTCTCCAGCCAAAAATTTCCTACCCCATATTTCTGCATTTGGAGGAAATTCATTGTCTCTAGTTTCCTTGGATATAGTAGAGAGTAATAATATGAGCTCTCAAATTCAAACGCCAACGATTACCATCCTTTCAAAACTTAGAAGTGTTTTGGTTCAATGCCACTCAGAGATTCAACTGACACAAGAATTTAAAAAATTTGTTGATGATCTATATGATGTGAATTTAACTGCGTCGGAAACAACATCACATGGACCACAAATCTCAAATCTTTCTTTGAGATCACTTTTGTTTGGAATGGGAAGTTCCCAAATAGTCATCAACACTATTAGGAACAGCTTATCACAGGGATTGAGAACCAATTCTAGTGATTCTTTCCTTCCGGGTGACAATTATCCTTCTTGGCTAGCTTATAAATGCGAAGGACCTTCGGTACTTTTCCAAGTGCCTGAGGATAGTGATTGTGGTATGAAGGGAATAGCTTTATGTGTTCTTTATTCATCAGCACTTGAAAACCTGGCAATTGAATGCTTCATTAGTGTCTTCATCATTAATTACGCAAAATTCACTATCCAAATATACAAGCAAGATACAATAATGTCATTTAATGATGAAGATTGGCAAGGCGTAGTATCAAATTTAGGAGTTGGTGACAATGTGGAGATCTTTGTAGCTATTGGGCATGGATTGACGGTTAAGGAAACCGCTGTCTATCTAATAAATGATCAGTCAAATGATATGGGAATTGAGCCATCTACAAATGCAAAAATGGAGCCATTACATGAAGTGAAAGTGCAGCCATCACCTAAAATAGAACCATCACTTATTGCGAAGAATGAGCCATTAGCGAAGAAAAATAGAAAAATCTTTATAAGATTTAGAAAGACAATGAGAGAATGTTTATGCTTGAACCAGAATAGAGATTGCAACAATTTTTGA 3228 0.3789 MSSSSDHPWIYDVFISFRGKDTRQTFVSHLYAGLSNAGIHTFLDDEKLRKGNKLGAELERAIEGSKISIVVLSPNYAGSSWCLNELVHIMDCQKTYGQLVLPVFYYVDPTFVRKQTGEFGKILQVTARKKEVCMSKWRTALNDVANLAGWDSKTIRNDGELVKKIVKDILKEINVMTSMSITKFPVGLESRVQKVTNFIDDQSSKACMIGIWGMGGSGKTTMAKAIYNQIHFKFKGRTSFVESIREVCDNNNRGIIHLQEQLLSDLLQIKQKIHSIALGITKIESRLRGQKALVVLDDVTKSEQLKALCANPKMFGSQSVLIITTRDLRLLNSLGADHVFTMTEMDKIQSLELFSWHAFRQPNPREDFTKLSRKVVAYCGGLPLALEVLGSYLSERTKQEWKSALSKLEKIPNDQVQEKLRISYDCLEDHTEKDIFLDICCFFIGKNRADVTAILNGCGLHADIGIAVLIERSLVKVEKNNKLWMHDLLRDMGRAIVGESSAKEPAKHSRLWFREDVLDVLSKNTGTETVEGLILKLQRTGKVSFSTNAFQEMKKLRLLKFDCVDLIGDYGLISKQLRWVDWQRFTFKFIPNDFDQGNLVVLELKYSNVRQVWQETKMLEKLKILNLSHSRHLKSTPDFSKIPNLEKLIMEDCQSLSEIHPSIGDLKNLLLINLRDCTSLDNLPREVYRLISVKTLILSGCSKIDKLEEDIVQMESLTTLIAANTGVKQVPFSIVRLQSIGYISLCGYEGLSRDIFPSLIQSWMSPAKNFLPHISAFGGNSLSLVSLDIVESNNMSSQIQTPTITILSKLRSVLVQCHSEIQLTQEFKKFVDDLYDVNLTASETTSHGPQISNLSLRSLLFGMGSSQIVINTIRNSLSQGLRTNSSDSFLPGDNYPSWLAYKCEGPSVLFQVPEDSDCGMKGIALCVLYSSALENLAIECFISVFIINYAKFTIQIYKQDTIMSFNDEDWQGVVSNLGVGDNVEIFVAIGHGLTVKETAVYLINDQSNDMGIEPSTNAKMEPLHEVKVQPSPKIEPSLIAKNEPLAKKNRKIFIRFRKTMRECLCLNQNRDCNNF* 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3806 1075 Pfam NB-ARC domain 189 416 IPR002182 GO:0043531
Tpr4g3806 1075 Pfam TIR domain 11 177 IPR000157 GO:0007165
Tpr4g3806 1075 SMART till_3 10 147 IPR000157 GO:0007165
Tpr4g3806 1075 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1004 IPR044974 GO:0006952
Tpr4g3806 1075 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 150 IPR035897 -
Tpr4g3806 1075 Gene3D - 345 428 IPR042197 -
Tpr4g3806 1075 Gene3D Ribonuclease Inhibitor 520 865 IPR032675 -
Tpr4g3806 1075 PRINTS Disease resistance protein signature 208 223 - -
Tpr4g3806 1075 PRINTS Disease resistance protein signature 286 300 - -
Tpr4g3806 1075 PRINTS Disease resistance protein signature 379 393 - -
Tpr4g3806 1075 PRINTS Disease resistance protein signature 617 633 - -
Tpr4g3806 1075 ProSiteProfiles TIR domain profile. 9 173 IPR000157 GO:0007165
Tpr4g3806 1075 SUPERFAMILY L domain-like 484 818 - -
Tpr4g3806 1075 Gene3D - 5 177 IPR035897 -
Tpr4g3806 1075 Gene3D - 178 342 IPR027417 -
Tpr4g3806 1075 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1004 - -
Tpr4g3806 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3806 Tpr-Chr4 44045675 44050464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3806 1 737 WRKY Transcription Factor Family AT4G12020 29.630 2.40e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3806 - - mtr:MTR_2g437560 1314.29