Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3804 ATGGGTTATTCTTCTTCTTCTTCTTTCAATCCTCCATGGATACACGACGTGTTCATCAACTTCAGAGGGAAAGACACACGTCAAAGCTTTGTTTCTCATCTGCATGCTGCCCTCACAAATGCAGGAATCAACACTTACCTTGACCACCAGCTTCACAAGGGAACAGAACTTGGACCTGAACTATTGAGAGCAATACAAGGGTCTCGTATATCTATCCTTGTTTTCTCCAAAAACTACACTGAATCTAGTTGGTGTCTTAATGAGCTGCAAAAAGTCATAGAGTGCCACATAACTCATGGACAATTGGTTATTCCTGTATTTTATGATGTTGATCCTTCGGTTGTTCGCCACCAGAAAGGTGATTTTGGAAAGGCTTTGAGGGCTACTGCTAAGTTGCACTCACCAAAGCTGCTCATTTGGAGGAGTGCACTCACTCAAGCTGCTAATTTGTCTGGTTGGGATGTCACTAAATGCAGTGAATTTGAACTGATGCAGCAAATTGTTGAGGATGTTTTGGCAAAACTTGACAGCACCTTCTTGTCTATTACCGAATTTCCAGTTGGATTAGAGCCCCGTGTGGAAAAAGTTACTGCCTTTATTGAAAATCAACAAAAGAAAGTGTGTGTGATAGGGATATGGGGAATGGGCGGATCCGGTAAAACAACCACAGCTAAAGCTATCTACAATCGAATTCATCTCAAATTTACCGATAGAAGTTTCCTTGAAAATGTTAGAGAAGTCTGTGAAAAGGAAAATAGAGGGATTATTCATTTACAACAACAACTTCTTTCAGATATCCTGAAAACAAAGACGAAGATACATAGCATTGCGTTAGGGACAACTAAAATTGAAAAAAGATTCCGGGGGAAAAAGGCACTCGTTGTACTTGATGATGTGACCACTTTTGAACAGTTAAAATCGCTATGTGGAAATCCTAAATTTTTTGGTCCAGGAAGTATATTAATTGTTACAACAAGAGATGTACGCCTACTTAATTTATTTAAGGTTGATTATGTGTGTAGAATGGAGGAAATGGACGAACACGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAACCTAGTCCCATGAAAGACTTCCACAAACTCTCCAAAAACGTAGTTGCTTATTGTGGAGGATTACCGGTTGCTCTTGAAGTCCTCGGTTCTTACTTATATGAGAGGACAAAACAAGAATGGAAAAGTGTAATCTCAAAATTAGAGAGAATTCCGAATGATCAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAAAGGATGATATATCAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGCAAGAACAGAGCTGATGTTACAGAGATACTAAATGGTTGTGGACTTTATGCAAATATTGGAATAACTGTCCTCGTAGAGCGGAGTCTTGTAAAAATTGAAAAGAACAACAAGCTCGGAATGCATGATTTAATAAGAGACATGGGAAGAGAGATAGTTCGTGAAAGTTCAACAAAAGATCCGGGGAAGCGTAGTAGATTGTGGTTTCGTGAGGATGTGCATGATATTTTGACAAAACATACTGGAACAGAAACCGTAGAGGGATTGGTTTTGAAGGTGGAGAGAAACAGTAAAGTTGTACTAAGTACTGATTCTTTCAAGGAGATGAAGAAACTGAGACTTTTACAACTTGATCACGCTGTCCTCGTTGGAGATTATCGGTTTCTCTCCAAAGAACTGAGATGGATTCATTGGAAAGGATTTAGCTTCAACTATATACCAGATGAATTTGATCAGGGAAATCTTGTTTCTATTGACGTAAAATACAGCAGTATCAAACAAGTGTGGAAGGAAACCAAGTTGTTGGATAATCTAAAAATTCTCAATGTCAGTCATTCGAGATACTTGAAAAACACACCTGATTTTTCAAAATTACCGAATCTAGAAAAGCTTATTGCGAAGGATTGTCCAAATTTGTCTGAGGTACACCACTCCATTGGAGATCTCAAGAATCTACTTTTGTTGAATTTGAAGGACTGTACAAGTCTTAGTAATCTCCCAAGGAAGGTCTATCAATTGGCATCAGTGAAAACTCTGATACTTTCTGGTTGTTCAAAGATCGACAAGTTGGAAGAAGACATAGGGCAAATGGAATACTTGACAACGCTGATTGCAAACGATACATCTATAAAAGATGTTCCCTATTCAATACTAAGATTGAAAAGCATTGGATATATATCTCTATGTGGATATGAAGGTTTATCACGTGATGTTTTTCCGTCTCTCATTTGGTCTTGGATGTCACCAACCAGAAATTCCTTACCCCGTGTTTCTCCATTTGAAGGTAATTCATTGTCACTAGTTTCCTTGGATGTAACGAGCAATAATATGGGCTATCAACCACCAATGCTTAGAAACCTTTCAAAACTTAGAAGTGTTTGGATTCAATGCCGTTCGGTGATTCAATTGACTCAAGAATTAGGAAATTTTCTTGATGATCTATATGATGTAAGTTTTACCAAGTTTGAGACAGCATCACATCCATCACAAATCAGTAACATTTCTTTGAGATCGCTTTTGATTGGAATGAGAAGTTGCCACATGGTCATCAACACTCTTAGTAAGAGCATATCACAGGGATCAACAACCAATGATTGTAGTGGTTTTTGTCTTCCCGACAGCAACTATCCTTCTTGGTTAGCCTATACATGTGAAGGACCATCGGTATATTTTCAAGTTCCTGAGGATAATGATCGTCACATGAAGGGAACAATTTTACGTGTTGTTTATTCATCAACATCTGAAAACCGAGCAGCTGAGTGTCTTACTAATGTTTTGATCATTAATTACACAAAATGCACAATCCAAATATACAAGGGAGACACAATAATGTCTTTTAATGATGAAGATTGGAAAGGTTTAACATCAAATCTAGGACCTGGTGACAATGTTGAGATTTTTGTAGTTTTTGGGCATGGATTGATTGTTAAGGAGACAACTGTCTATCTAATTTATGACCAGTCCAATACTACGAAATTTGAACAATCGATTATTATGGAAGTTGAGCCATCAACTAACCTGGCAATGGAGCCATCACCTGAAGTGAACATGCAGCCATCACCTGAAGTGAACATGCAACCATCACCTGAAGTGAAAGTGGAAGCGTCGACTGGTGTTAAAATGGATCTGTCACCTGATGTGAAGGTGCAGTCATCACCTATTATGAAAATAGAGCCACCACCAAAGTCCAATAGAAGTATCTTTACAAGATCTGCAAAAACATTGGGTGCATGTCTATGCTTGAAACCAGCATAG 3306 0.382 MGYSSSSSFNPPWIHDVFINFRGKDTRQSFVSHLHAALTNAGINTYLDHQLHKGTELGPELLRAIQGSRISILVFSKNYTESSWCLNELQKVIECHITHGQLVIPVFYDVDPSVVRHQKGDFGKALRATAKLHSPKLLIWRSALTQAANLSGWDVTKCSEFELMQQIVEDVLAKLDSTFLSITEFPVGLEPRVEKVTAFIENQQKKVCVIGIWGMGGSGKTTTAKAIYNRIHLKFTDRSFLENVREVCEKENRGIIHLQQQLLSDILKTKTKIHSIALGTTKIEKRFRGKKALVVLDDVTTFEQLKSLCGNPKFFGPGSILIVTTRDVRLLNLFKVDYVCRMEEMDEHESLELFSWHAFRQPSPMKDFHKLSKNVVAYCGGLPVALEVLGSYLYERTKQEWKSVISKLERIPNDQVQEKLRISYDGLKDDISKDIFLDICCFFIGKNRADVTEILNGCGLYANIGITVLVERSLVKIEKNNKLGMHDLIRDMGREIVRESSTKDPGKRSRLWFREDVHDILTKHTGTETVEGLVLKVERNSKVVLSTDSFKEMKKLRLLQLDHAVLVGDYRFLSKELRWIHWKGFSFNYIPDEFDQGNLVSIDVKYSSIKQVWKETKLLDNLKILNVSHSRYLKNTPDFSKLPNLEKLIAKDCPNLSEVHHSIGDLKNLLLLNLKDCTSLSNLPRKVYQLASVKTLILSGCSKIDKLEEDIGQMEYLTTLIANDTSIKDVPYSILRLKSIGYISLCGYEGLSRDVFPSLIWSWMSPTRNSLPRVSPFEGNSLSLVSLDVTSNNMGYQPPMLRNLSKLRSVWIQCRSVIQLTQELGNFLDDLYDVSFTKFETASHPSQISNISLRSLLIGMRSCHMVINTLSKSISQGSTTNDCSGFCLPDSNYPSWLAYTCEGPSVYFQVPEDNDRHMKGTILRVVYSSTSENRAAECLTNVLIINYTKCTIQIYKGDTIMSFNDEDWKGLTSNLGPGDNVEIFVVFGHGLIVKETTVYLIYDQSNTTKFEQSIIMEVEPSTNLAMEPSPEVNMQPSPEVNMQPSPEVKVEASTGVKMDLSPDVKVQSSPIMKIEPPPKSNRSIFTRSAKTLGACLCLKPA* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3804 1101 SMART till_3 14 150 IPR000157 GO:0007165
Tpr4g3804 1101 Pfam NB-ARC domain 192 417 IPR002182 GO:0043531
Tpr4g3804 1101 PRINTS Disease resistance protein signature 209 224 - -
Tpr4g3804 1101 PRINTS Disease resistance protein signature 286 300 - -
Tpr4g3804 1101 PRINTS Disease resistance protein signature 379 393 - -
Tpr4g3804 1101 PRINTS Disease resistance protein signature 664 680 - -
Tpr4g3804 1101 ProSiteProfiles TIR domain profile. 13 175 IPR000157 GO:0007165
Tpr4g3804 1101 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 153 IPR035897 -
Tpr4g3804 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Tpr4g3804 1101 Gene3D - 182 339 IPR027417 -
Tpr4g3804 1101 Gene3D Ribonuclease Inhibitor 518 884 IPR032675 -
Tpr4g3804 1101 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 18 1003 - -
Tpr4g3804 1101 Pfam TIR domain 15 182 IPR000157 GO:0007165
Tpr4g3804 1101 SUPERFAMILY L domain-like 485 827 - -
Tpr4g3804 1101 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 1003 IPR044974 GO:0006952
Tpr4g3804 1101 Gene3D - 344 428 IPR042197 -
Tpr4g3804 1101 Gene3D - 10 181 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3804 Tpr-Chr4 44019702 44024730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3804 15 757 WRKY Transcription Factor Family AT4G12020 29.949 1.58e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3804 - - mtr:MTR_8g011850 1348.95