Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3803 ATGAGAAGGAACTGTGAATTGGAGAAGAAATCACTGGAGATGGACTTTTTCTCGGACTATGGCGATGCCAACCGGTATAAAATTCAAGAAGTAATTGGGAAAGGCAGTTATGGTGTTGTTTGTTCAGCTGTTGATACTCATACTGGTGAAAAAGTTGCAATTAAAAAGGTTCATGGTATCTTTGAGCATATATCCGACGCTGCACGTATTCTTCGTGAGATAAAGTTGCTCAGACTTCTTAGACATCCGGATATTGTTGAAATTAAGCACATTATGTTGCCTCCTTCAAGCAGAGAATTCAAAGATATTTATGTTGTTTTTGAGCTTTTGGAATCTGATCTGCATCAAGTCATTAAAGCCAATGCCGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTATCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACTCCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCCGAGCTCTGTGGATCATTTTACTCAAAGTATACGCCGGCAATTGATATTTGGAGTATAGGATGCATCTTTGCTGAAGTATTAATAGGAAAACCACTTTTTCCCGGAAAAAGTGTCGTACATCAGTTGGATCTGATCACAGATCTGCTCGGGACCCCCTCAATGGATTCTATATGTCGGGTACGCAATGATAAAGCAAGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTATCACTACGGCTACTGGAGAGGTTGCTCGCCTTTGATCCCAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAATTGAAAGGGAACCATCTTGCGAGCCCATTACACAAATGGAGTTTGAATTTGAAAAGAGAAGAGTAACAAAGGGAGAAATCCGAGACTTGATTTTCCATGAGATTCTAGAGTACCATCCTCAACTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTGACAAGCAGTTCACTCATCTTGAGGAAACTGGTGGTAAAAGTGATCCTGTTGTGCCACTTGAAAGAAAACATGCATCGCTTCCCAGGTAA 1233 0.3998 MRRNCELEKKSLEMDFFSDYGDANRYKIQEVIGKGSYGVVCSAVDTHTGEKVAIKKVHGIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSREFKDIYVVFELLESDLHQVIKANADLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPSMDSICRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCEPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTERTNFLYPSAVDQFDKQFTHLEETGGKSDPVVPLERKHASLPR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3803 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 375 - -
Tpr4g3803 410 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Tpr4g3803 410 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Tpr4g3803 410 CDD STKc_TDY_MAPK 25 362 - -
Tpr4g3803 410 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3803 410 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Tpr4g3803 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 375 - -
Tpr4g3803 410 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Tpr4g3803 410 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr4g3803 410 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3803 410 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3803 Tpr-Chr4 43996620 43999857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3803 8 410 MAP Kinase Gene Family AT2G42880 87.010 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr4g3803 Pkinase 4.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3803 - - mnt:21404254 740.339