Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3802 ATGGATTCACCGAGGGCCCGTTTCGAAACCATGATCCGAGCATTGGGGCTGAGCTGGGGGGTGACCGACGATGGAAAAGGGGGGGTTCATCAGCAAAAAACACTCCAACTCCCAAATCAAAATGAGTTTGAGGTGCGTGCCAAGTTGAAGAAGCTTGTGATCAAGGTAGATGTGCTTGATGACAAGGTTAAGAAGAAGGCAGTGAAAACACTTGCAAATGTTTCGGGGGTGGAATCCGTCTCAGTGGACATGAATGAGAAAAAAATGACGGTGATAGGAGCAGACCGAGCAGTAGATCCGGTATATATGGTGAAAAAATTGAGAAAAATTTGTCGAGCAGAAATAGTTTCCGTAGGACCATTAAAAGAGCCTGAGAAGAAGAAAGAAAAACCCAAAAAGGAGGGAGAAAAGAAAGAATTAGTGGATTCTTCTACGTCTTCTCTGTTTTCTTCTTCTACGTCTTCCCGGTCTTCTTTTTCTTCATCCTCTGATTCTCGAGTGACGCACGACGTGTTCATCAATTTTAGTCCAAAAGACGATAGCAAGAATTTCGTTTCTCGTCTCAATGTTGCCCTCGCAAAAGCCGGAATCGAAAGTTACACCAACTATCTTCACAAGGGAACCCACGGGTTGGGACTTGAAGAACTATTGTTGGAAGACACTCATATATCTATCCTTGTTTTCTCACAAAACTACACTGAATCTAATTCGTGTCTTAACGAGCTGCAACAAATCATGAAATGCCGCAGAACTCATGGCCACATGGTTATGCCCGTGTTTTACGACGTTGATCCATCGGTTGTGCTTCATCAACAGGGTGCTTTTGGAAAAAAATTGCACGCAACTGCGGAAAATAGATACTTAGATAGAGAATTGAGGGAAAATACGCTGTTGAGTTGGAAGAGTGCACTCACCCAAGCTGCTAGTTTGATTGGTTGGGATGCCACCAATTACAGGATTGAAGCTGAACTAATGCAGCAAATTGTTGGGGACATTTCGAGAAAGCTAAAACGTGGAATTCCAGGTGGAATGGAGTTGCATGTGCGAAAAGTAACTGAGTTAATTGTAAATCAATCTAGCAAAGTTTCCTGGATAGGGATCTGGGGAATGGGTGGATCGGGGAAAACAACCACAGCCAAAGCCATCTACAACCGACTTCAGGACAAATTTTTGAATACAAGTTTCATAGAAAATGTTAAAAAAGTTTGTGAATTGGAAAATAGCGGGATTATTCATTTACAACAACAACTTCTTTCTGATATTTTGAAAACAAATATGATGATACGTAGCATTGCAGAGGGGGAAATGATGATCAGTGAAAGATTTCAGGGGAAAAAGGTACTTGTTGTCCTTGATGATGTGACCACATTTGATCAGTTAAAAGCACTATGTGCAAATCGTAATTTGTTAGGTCCAGGAAGTGTAATAATTGTTACGACTAGAGATGTACAGCTACTTAGGTTATCTATGGTTGATTATGTGTATATAATGGAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTCAGTTGGTATGCTTTTAGACAACCTAGTCCAATAAAAGACTTCAATGAACTCTCAAGGAATGTAATTGCTTATTGCATAGAATTACCACTGGTTCTTGAAGTCCTTGGTTCTTACTTATTTGCTAAGACAAAACAAGAATGGTTAAGTGTACTATCAAAGTTAGAGAGAATTCCCAAATATCAAGTGCATGAGAAGCTGAGAATAAGCTATGATGGTTTAGAGGATATTATGGTGAAGGATATATTTCTCGACATATGTTGTTTCTTTATTGGTAAGGACAGAGACTATGTCACAGACATACTAAATGGCTGTGGACTTTATGCTGATGTTGGAATAGCTGTCCTCATAGAGCGAAGGCTTGTAAAAATTGAGAAGAATAACAAGCTCGGAATGCATGATTTAATTAGAGACATGGGAAGAGAAATTGTTCGCAAAAGTTCAACAGAAGAACCTGGGAAGCGTAGTCGATTGTGGATTCATGACGACGTAGATGATGTTTTGACAAAATATACTGGAACAGAAACTGTAAAGGGGTTGGTTTTGAAGTCGCAAGGAACTGGCAGAGTTTCCTTCAATACTAATTCTTTCAAGGAGATGAAGAAACTCAGACTTCTACAACTCGACCGTGTTGACCTCACGGGAGATTATGGGAACCTTTCTAAAGAACTGAAATGGGTCCATTGGCAAGGATTTACCTGCAACTTTATACCTGATGACTTTCATCAAGAAAATCTAGTTGTGTTTGAATTAAAACACAGCAATATTAAACAAGTATGGAATGAAACCAAGGTGCTGGTGAATCTAAAAATTCTCAATATCAGTCATTCAAGATACTTGAAAAGCACCCCGGACTTTTCAAAATTGCCATATCTTGAAAAGCTCATTATGAAGGATTGTCCATGTTTGTCCGAAATACACCCATCCATTGGAGATCTCAATAATCTTCTTCTGATAAATTTGAAGGACTGTACAGGTCTTAACAATCTCCCAAAGAAGATCTATCAACTGAAATCTTTGAAAACTCTCATCCTTTCTGGTTGTTTGAAGATTGACAAGTTGGAAGAAGACATAAAGCAGATGGAATCCTTGACAACACTGATTGCAAAAAATACAGCTATTAAAGAAGTTCCCTTTTCAATAGTGTTGGTGAATCTAAAAATTCTCAATCTCAGTCATTCAAGATACTTGAAAAGCTCCCCAGACTTTTCAAAATTACCCAATCTTGAAAAGCTCATCATGAAGGATTGTCCATGTTTGTCCGAGATACACCCATCAATTGGAGATCTCAATAATCTTCATCTGATAAATTTGAAGGACTGTACAGGTCTTGGCAATCTTTCAGAGAAGATCTTTCAGCAGAAATCTTTGATAACTCTCAACCTTTCTGGTTGTTTGAAGATTGACGAGAAACATGCTGATGAGAAAAACGTTTCGAAGAATGATGTTGATGCCAAGTCCAAAGGTGGTTCCTCGAGGTGTGATAATCAAAGGGATGTGGATGAAGCATGTAAAAGACATGTGGAAATTCTAAATCAATCTGATGAGAAAGGGGCTTTGGTGAATAATGTTGATGTCAACAGAAGGATGGTCGAGCAAATTCCATATGCTGTTGCTGAAAGCCTCTTTAACAGGTTGGCTTCTACAACTTTTCGTGAACATGGACGGATTTATAGTGTTATGGATGAGTTGGAAAGATTTAAGAATAATGTTGAATCCATAAGAGCTGTGCTCCCTGATGCCCAGAAGAAACAGGAACAAGATTGTGCTGTACAAAATTGGATAACAAGCCTCAAGGATGTGCTTCATCTTGCAGATGACTTGCTTGATAAATTTATTATTGAAGGTATGAGATACAAAGAGGATGCAAGTGATAAGAACCAACTGACATGGGGTCATTCATCAAGCCATAATTTTCTACACCAAAAAGTGGCTCCTGAAATTGAAAAAATACAAAAAAAGTTTGACGATGTGCTAGAAGAAATGGATAGGTTGAAATTAAGCCCAAAAGCTACGGTGGTTAAGCAAACTGACAGTTTAAGGAGCAAATCTATTTCTTTTTTGTTAGAAAATGATATCACTGGCAGAGATGATGACAAAGAGGAGATTATAAATCTCTTGAGGCAACCACATGGAAATATCTCGTCAATTGCCATTGGAGGTATTGGAGGTATAGGCAAGACAACTCTTGCTCAACTTGTATTTAATGATGTGGAAGTGCAAAATCATTTTGAAAAGCGAATGTGGGTATGTGCATCAAATCACTTTGATGTCAAGACTATTGTGAAAAAAATGCTGGAGTCATTAATCGATAGCAAAATTGATGCTAAGTTATCATTTGAATACATACAGCATAAACTTCGTGAAAATTTAACCGGTGAAAGGTACTTGTTAGTCTTGGATGACATTTGCAATGGTAGCCATGAAAATTGGACTCAATTGAGAACTTATCTAATGTGTGGTTCTAAAGATAGTAAGGTTTTAATGACAACTCGCAGTAAAAATTTGTCAGAGATACCAAAAGCAAGCAACCTCTGGGTTTTGAATGGTTTGACTCTAGATGTATCTTGGAATATGTTAAAGAAAATTACAATTGGGAAAGATACCAGTGTAGTGAATAAAAAATTTGAATCAATTGGTAAAAGAATTGCAAATAAGTGCAGGGGAGTTCCACTAGCAATTAGAGCACTGGGAGGCCTATTACAGAGTAAAAGTGAAGAAAGGGAATGGATCAATGTCTTACAAGGCGACTTCTGGAAATTATGTGAAGACAAAGAATGCATCATGCCAATTCTGAAATTGAGTTACCAGAGTTTGTCGCTTCGGTTGAGACAATGTTTTGCTTATTGCGCTTTATATCCTAAGGATTGGGAAATCAAGAAGGATTTGTTGATTCAACTTTGGATGGCACAGGGCTATCTTGACTACACAGATGAAAAAACACTCATGGAAGATGTCGGTAACGAATTTGTGAAGATTTTCTTGATGAAGTCATTTTTCCAAGATGCAAAAGTGGGAGAAGATGGTGATATAGTTAGTTTTAAAATGCATGATCTAATGCATGATCTTGCAACACAAGTAGTTGGAAATGATTGTTGTTATTTGGATAGGGAGACAAAGATATGGGTACAAAGACCCATACACGTATCGTTGGAGCCCAATGCAGTCCATTTGTTGGACTCATTAGATGCAAGCAGACTGCGAACTTTGATTTTGCTGTCTTCCAACGAGGAGGAGGAATTGAATGGGGATGAATTGTTGGTTATTTCTAAATTCAAACACTTACGTGTCTTGAAGCTGTCACATTGTTCTTTAAGCAAGTTGTCTACTTCAATTGGAAAATTGAAACATTTAAGATATCTTAACTTATCACACTGTAGAGGACTAGGAAGTCTTTACAAATCCATTAGCAGTCTTGTTTTGTTACAAACACTGATATTGACACCTAAGGAAAAATTTGAGTTTTCTACGGAGGTTGTATCAAAATTAATCAATTTAAGACACCTTCACATCTCTAATTGGGAAGCCTCCAGAGACGAGAGACCATCTGAATTTGTAAAATTAAGCATTTGGAAATATGAGGGTATGGTTTTTTCAAAATGGCTTTCTCCACTCACAAATATTGTTGAAATATCTTTCTTTTTGTGTGGAAGTCTCCAGCATCTCCCACCGTTGGAACATCTCCCATTTCTTAAGTCCCTTCATATAAGTTTCCTTGAAGAACTGGAGTACATATATTATGAACAACAAGATTTTACTTCAGCATTCTTTCCATCTTTAGAGAGCCTCACTTTGCAGTTTTGTGACAAGTTGAGGGGATGGTGGAGGATGGGAGACGATTTCAATAATACTACCTGTTCACTAAATCTCTCCTTGCCTCCCTTTCCTCGTCTCTCTCAATTATCAATCATAGGATGTCGGATCTTGACTTTCATGCCTGCCTTTCCAAATCTTGAGAACAGATTGGAATTGTACAATAGTAGTGTTGAAACCTTGGTAGCAACACTGAGCACAGTAGCATTAGAAAGTTTGAATGACTTCCCTCCTCTCTCCATGCTCAAATCCTTGCACATTGACGGAGTGAACCTGGATGTGAAAAGAATCCCAGCGGATTGGATGCAAAATCTTACTTCTCTCCAGCTTCTTCAAATTAATTGGTTTTCTTGTGAAGCATTTCAGGAAATCGAAACTTGGTTTAAGGATGACCTCAAGTGTCTTCCTTCTCTACAAACAATTACCTTTCATAATTGCGAAGACCTAGAGGCATTGCCAGATTGGATATGCAACTTCTCATCGCTTCAGCATCTTAGGGTGTATGATTGCATAAATTTGGTATCCCTGCCTGAAGGAATGCCCTGTCTAACCAACTTACAGACCCTAGAAATCATTGGGTGTCCCCTCTTAGATGAAGAATGCCAGGCAAAAACAGATGAAACTTGGCCCAAAATTCGTCATGTGCCAATGATAATCTTATCATCTCTTCATTAG 6012 0.3841 MDSPRARFETMIRALGLSWGVTDDGKGGVHQQKTLQLPNQNEFEVRAKLKKLVIKVDVLDDKVKKKAVKTLANVSGVESVSVDMNEKKMTVIGADRAVDPVYMVKKLRKICRAEIVSVGPLKEPEKKKEKPKKEGEKKELVDSSTSSLFSSSTSSRSSFSSSSDSRVTHDVFINFSPKDDSKNFVSRLNVALAKAGIESYTNYLHKGTHGLGLEELLLEDTHISILVFSQNYTESNSCLNELQQIMKCRRTHGHMVMPVFYDVDPSVVLHQQGAFGKKLHATAENRYLDRELRENTLLSWKSALTQAASLIGWDATNYRIEAELMQQIVGDISRKLKRGIPGGMELHVRKVTELIVNQSSKVSWIGIWGMGGSGKTTTAKAIYNRLQDKFLNTSFIENVKKVCELENSGIIHLQQQLLSDILKTNMMIRSIAEGEMMISERFQGKKVLVVLDDVTTFDQLKALCANRNLLGPGSVIIVTTRDVQLLRLSMVDYVYIMEEMDENESLELFSWYAFRQPSPIKDFNELSRNVIAYCIELPLVLEVLGSYLFAKTKQEWLSVLSKLERIPKYQVHEKLRISYDGLEDIMVKDIFLDICCFFIGKDRDYVTDILNGCGLYADVGIAVLIERRLVKIEKNNKLGMHDLIRDMGREIVRKSSTEEPGKRSRLWIHDDVDDVLTKYTGTETVKGLVLKSQGTGRVSFNTNSFKEMKKLRLLQLDRVDLTGDYGNLSKELKWVHWQGFTCNFIPDDFHQENLVVFELKHSNIKQVWNETKVLVNLKILNISHSRYLKSTPDFSKLPYLEKLIMKDCPCLSEIHPSIGDLNNLLLINLKDCTGLNNLPKKIYQLKSLKTLILSGCLKIDKLEEDIKQMESLTTLIAKNTAIKEVPFSIVLVNLKILNLSHSRYLKSSPDFSKLPNLEKLIMKDCPCLSEIHPSIGDLNNLHLINLKDCTGLGNLSEKIFQQKSLITLNLSGCLKIDEKHADEKNVSKNDVDAKSKGGSSRCDNQRDVDEACKRHVEILNQSDEKGALVNNVDVNRRMVEQIPYAVAESLFNRLASTTFREHGRIYSVMDELERFKNNVESIRAVLPDAQKKQEQDCAVQNWITSLKDVLHLADDLLDKFIIEGMRYKEDASDKNQLTWGHSSSHNFLHQKVAPEIEKIQKKFDDVLEEMDRLKLSPKATVVKQTDSLRSKSISFLLENDITGRDDDKEEIINLLRQPHGNISSIAIGGIGGIGKTTLAQLVFNDVEVQNHFEKRMWVCASNHFDVKTIVKKMLESLIDSKIDAKLSFEYIQHKLRENLTGERYLLVLDDICNGSHENWTQLRTYLMCGSKDSKVLMTTRSKNLSEIPKASNLWVLNGLTLDVSWNMLKKITIGKDTSVVNKKFESIGKRIANKCRGVPLAIRALGGLLQSKSEEREWINVLQGDFWKLCEDKECIMPILKLSYQSLSLRLRQCFAYCALYPKDWEIKKDLLIQLWMAQGYLDYTDEKTLMEDVGNEFVKIFLMKSFFQDAKVGEDGDIVSFKMHDLMHDLATQVVGNDCCYLDRETKIWVQRPIHVSLEPNAVHLLDSLDASRLRTLILLSSNEEEELNGDELLVISKFKHLRVLKLSHCSLSKLSTSIGKLKHLRYLNLSHCRGLGSLYKSISSLVLLQTLILTPKEKFEFSTEVVSKLINLRHLHISNWEASRDERPSEFVKLSIWKYEGMVFSKWLSPLTNIVEISFFLCGSLQHLPPLEHLPFLKSLHISFLEELEYIYYEQQDFTSAFFPSLESLTLQFCDKLRGWWRMGDDFNNTTCSLNLSLPPFPRLSQLSIIGCRILTFMPAFPNLENRLELYNSSVETLVATLSTVALESLNDFPPLSMLKSLHIDGVNLDVKRIPADWMQNLTSLQLLQINWFSCEAFQEIETWFKDDLKCLPSLQTITFHNCEDLEALPDWICNFSSLQHLRVYDCINLVSLPEGMPCLTNLQTLEIIGCPLLDEECQAKTDETWPKIRHVPMIILSSLH* 2004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3802 2003 CDD RX-CC_like 1044 1166 IPR038005 -
Tpr4g3802 2003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 898 985 IPR044974 GO:0006952
Tpr4g3802 2003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 172 890 IPR044974 GO:0006952
Tpr4g3802 2003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1192 1448 IPR044974 GO:0006952
Tpr4g3802 2003 SUPERFAMILY L domain-like 640 975 - -
Tpr4g3802 2003 SMART till_3 168 310 IPR000157 GO:0007165
Tpr4g3802 2003 SUPERFAMILY Toll/Interleukin receptor TIR domain 158 313 IPR035897 -
Tpr4g3802 2003 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 898 985 - -
Tpr4g3802 2003 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 172 890 - -
Tpr4g3802 2003 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1192 1448 - -
Tpr4g3802 2003 Gene3D Ribonuclease Inhibitor 1557 1786 IPR032675 -
Tpr4g3802 2003 Gene3D - 1359 1443 IPR042197 -
Tpr4g3802 2003 Gene3D - 499 583 IPR042197 -
Tpr4g3802 2003 SUPERFAMILY L domain-like 1523 1979 - -
Tpr4g3802 2003 MobiDBLite consensus disorder prediction 122 141 - -
Tpr4g3802 2003 Gene3D - 341 492 IPR027417 -
Tpr4g3802 2003 Coils Coil 1072 1092 - -
Tpr4g3802 2003 Gene3D - 1183 1351 IPR027417 -
Tpr4g3802 2003 Gene3D Ribonuclease Inhibitor 1788 1988 IPR032675 -
Tpr4g3802 2003 Gene3D Ribonuclease Inhibitor 838 995 IPR032675 -
Tpr4g3802 2003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1187 1458 IPR027417 -
Tpr4g3802 2003 Gene3D - 1444 1535 IPR036388 -
Tpr4g3802 2003 Pfam Rx N-terminal domain 1048 1133 IPR041118 -
Tpr4g3802 2003 PRINTS Disease resistance protein signature 364 379 - -
Tpr4g3802 2003 PRINTS Disease resistance protein signature 441 455 - -
Tpr4g3802 2003 PRINTS Disease resistance protein signature 534 548 - -
Tpr4g3802 2003 PRINTS Disease resistance protein signature 843 859 - -
Tpr4g3802 2003 Pfam NB-ARC domain 1205 1445 IPR002182 GO:0043531
Tpr4g3802 2003 Pfam NB-ARC domain 346 580 IPR002182 GO:0043531
Tpr4g3802 2003 Gene3D - 46 123 - -
Tpr4g3802 2003 Gene3D - 163 340 IPR035897 -
Tpr4g3802 2003 Coils Coil 1156 1176 - -
Tpr4g3802 2003 Gene3D - 1047 1163 - -
Tpr4g3802 2003 Pfam TIR domain 169 338 IPR000157 GO:0007165
Tpr4g3802 2003 ProSiteProfiles TIR domain profile. 167 336 IPR000157 GO:0007165
Tpr4g3802 2003 Gene3D Ribonuclease Inhibitor 680 837 IPR032675 -
Tpr4g3802 2003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 594 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3802 Tpr-Chr4 43982968 44014672 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3802 159 946 WRKY Transcription Factor Family AT4G12020 29.963 1.04e-77 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3802 - - mtr:MTR_8g037220 1581.62