Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3797 ATGGATTCTTCTTCTTCTTCTCCGTTTTCTTCTCCTCCGTCATCTCCGACTTCTTCTTTTTCTTCTCGGGCTTCTTTTTCTTCTCGGGCTTCTTTTTCTTCATCCTCCGATTCTCAATGGGCGCACGACGTGTTCATCAATTTTACTCCAAAAGACGATAGCAAAGTTTTCGTTTCTAATCTCCATACTGCCCTCGGAGATGCCGGAATCGAACCTTACACAGACTATCAGTTTGACAAGGGACCCGAGTTGGGTTCAGAATTATTGGAAGCAATAGAATACGCTCATATATCCATCATTGTTTTCTCACAAAACTACACTGAATCTAGTTCGTGTCTTAACGAGCTTGAAAAAATTATGGAATGCCACAGTACTCATGGGAACGTGGTTATACCCGTGTTTTGCGGCGTCGATCCATCTAAGGTGCGTCATCAAAACGGTGCTTTTGGAAAAAAATTGCACGCAACTGCCAAAGAAAGTTACTTAGATAGAGAATTGAGGGAAAATATGGTGTTCAGTTGGAAGAATGCACTCAATCAAGCTGCTAATTTGCCTGGTTGGGATGCCACCTATTACAGGAATGACGCCGAACTAATTCCTCAAATTGTGAAGGAAGTTTTGGGAAAGCTAAATAGCAGATTATTGCCTATTACCGAATTTCAAGTTGGATTGGATGCCAATGAACAACGAGTGATTCACTTTATTGAAAATCAAGCAAGCAAAGTTTCCTTGATAGGGATCTGTGGTATGGGTGGATCGGGTAAAACAACCACAGCCAAAGCCATCTACAACCAAATTCATAGGAATTTTTTGAATACAAGTTTCATTGAAAATGTTGCAGAAGTTTGTGAAAGAAAAAAAAATAAAAATAGTGGGATTATTGATTTACAACAACAACTTCTTACAGATGTCCTGGGCACAAATGTGCGGATATCTAGCATTGAATATGGGAAAAACATGATCAGACAAAGATTTTCGGAGAAAAAGATACTCGTTGTACTTGATGATGTAACAACATTTGAACAATTAAAGGCACTATGTGGAAATCCTAAAATGTTTGCTCCAGGAAGTGTATTAATTGTTACAACCAGAGATGAACACCTGCTTAAGCTAGTTAAAGTTGACTGTATCTTTACAATCAGGGAAATGGACGAAAACGAGTCCCTTGAGCTATTCTCTTGGCATGCTTTTAGAAAAGCAAGTCCTGAAGGAGGATTTAGTGAACTCTCAAGAACTGTGGCTGCTTATTGTGGAGGGTTACCACTGGCTCTTGAAGTCCTTGGATCCTACTTATTTGATAGGACAAAACAAGAATGGACAAGTGTACTATCGAAGTTAGAGAGAATTCCCAATGATCAAGTGCAAGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGATATGGTAAAGGATATATTTCTTGACATATGCTGTTTCTTTATTGGTAAGGACAGAGCCTATGTTACAGAGATACTTAATGGCTGTGGACTTTATGCTGATATTGGAATAGCCGTCCTCATAGATCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGATTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGCGAAAGTTCAGCAAGAGAGCCAGGGAAGCGTAGTAGATTGTGGTTTCACGACGATGTACATGATGTTTTGACAAAAAATACTGGAACAGAAACTGTCGAGGCACTGATTTTGAACATGCAAAGAACAGGCAGAGTTAGCTTTAGTACTAATGTTTTCCAAGACATGAAGAAACTGAGACTTTTACAACTTGATTGTGTTGACCTCACTGGAGATTTTGGGTATCTTTCCAAACAACTGAGATGGGTCAAATGGCAACGCCCTACTTTCAACTATGTACCCAATGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAACATAGCAATGTTAAACAAGTTTGGAAGGAACCCAAGTTGTTGCAGAAGCTAAAAATTCTCAATCTCAGTCATTCCAGGTACTTGAAAAGCACCCCTGACTTTTCAAAATTACCAAATCTAGAAAAACTCATTATGAAGGATTGTCCAAGTTTGTCTGAGGTACACTCGTCCATTGGAGATCTCAATAATCTTCTTCTCATAAATTTGAAGGACTGTTCAAGTCTTGTCAATCTCCCAAAAAAGATTTATCAATTGAGATCAGTGAAAACTCTCATCATTTCTGGTTGTTCAAAGATTGTCAAATTAGAAGAAGATATAGGGCAAATGATATCCTTGACAACTCTAATTGCAGCAAATACTGGTGTCAAACAAGTGCCCTTTTCGATAGCTAGATCAAAAAGCATTGCATATATATCCTTATGTGGATATGAAGGATTATCACATGATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAATCCGTTAGGACATATTCCCCAATTTGGTGGCATTTCAACGTCTCTTGTTTCCATGGATGTAGATAGTAATAATTTGGGTTTGATCTATCCATCACCAATACTTAGCAGCGGTTCGCAACTTAGATGTGTTTGGGTACAGTGTCACTCAGAGATTCATCTGAAACAAGAATTGAGAAGATTTCTTAATGATCTTACTCAGTTGGAAATATCACATGCATCACAAATATCGGATCTTTCCTTGAAGTCTATTTTGATTGGAATGGGAAGTTGCCACATAGTCAACGAGGCTCTTAGCAAGAGCTTATCGCAGGGACTGGCAACCAATGATTCAATTGCTTCTTTCCTTCCGGGTAACAATTATCCTTCTTGGTTAACCTATACAAGTGAAGGACCATCAGTATATTTTCAAGTTCCTGAGGATAGTGATTGTGGAATGAAGGGAATAACTTTATGTGTTATTTATTCATCAACACTCGAAAACACGGCAACTGAATGTCTCGTTAGTGTTTTGATCATTAACTACACAAAATTCACTATTCAGATATACAAGAGAGACACCGTAATCTCCTTTAATGATAAAGATTGGGAGTGTGTAGTATCAAATTTAGCAGTTGGTGACAATGTAGAGATTTTTGTAGCTTTTGGGCATGGATTGACTGTTAAGGAGACGGCTGTGTATCTAATATATGGTCAGTCGACTACGGTGGAAGCGCAGCCATCACCTGATGTGAAAATGGAGTCACCACTTACTATCAACATAAGGATGACCGAGCAAATTCCATATGCTGTTGCTGAAAGCCTCTTTAACAGGTTGGCTTCTGCAACCTTTCTTGAATATGGACGGATTTATGGTGTTATGGATGAGTTGGAAAGGCTTAAGAACTCTGTTGAATGCATAAGAGTTGTGCTCCTTGATGCCCAGGAGAAACAGGAACAAAATTGGATAAGAAGGCTCGAAGATGTGCTTCATCGTGCAGATGACTTGCTAGATGAATTTATTATTGAAGATATAAGATACAAAGGGGATGCAGGTGATAAGAAAAAAATGACACATGTATTTCGTCCGTTATCTTCAAACCATCTTCGCCAAACAATGGTTCCTAAAATTAAAAAAATACAAAAAAAGTTTGATGATGTGGTGGAAGAAATAGCTAAGTTGAATTTAATCCCAACAGCTGTGGTGGTTAAGCAAACTGACAGTTTAAGGAGCAAATCTATTTCTTTTTTGTTAGAATCAGATATCACCGGAAGAGAAGATGATAAAAAGGAGATTATAAATCTCTTGAGGCAACCACATGGAAATATCTCATCAGTTGCTATTGTGGGTATTGGGGGTATTGGCAAGACAACCATTGCTCGGTTTGTGTATGATGATGTGGAAGTGAAAAAACATTTTGAAAAGCAAATGTGGGTATGTGTATCTAATAACTTTGATGTCAAGACTATTGTGAAGAAAATGTTGGAATCATTAATCAATAGCAAAATTGATGATAAGTTATCATTTGAATACATACAACATAAACTCCTTGAAAATTTAACTGGTGAAAGATACTTGTTAGTCTTGGATGACATTGGCAATGCTAGTCATACAAAATGGACTCAATTGAGAACTTATTTGATGTGTGGTGCTGAAGATAGTAGGGTTTTAATGACCACTCGTAGTAAGATTGTGTCAGAAGCAAGCAACCTCTATGTTTTGAATGGTTTGACTCTAGATGTATCTTGGAGTTTGTTAAAGAAAATTACATTTGGCAATGAAACCAGTGTTGTGAATCAAAAACTTGAATCAATTGGTACAAAAATAGCAGAAAAGTGCATGGGAATTCCACTAGCAATTAGAACACTGGGAGGCCTATTACAGAATAATAGTGAAGAAAGGGAATGGATCAATGTCCTACATGGTGACTTTTGGGAATCATGTGAAGACAAAGAAAGCATCATGTCGATCTTGATATTCAGTTACCAAAGTTTGTCACTTCAGTTGAGACAATGTTTTGCTTATTGCTCTTTATTTCCTAAAGATTGGGAAATCCAGAAGGATATGTTGATTCAACTTTGCATGGCACAGGGTTATCTCGAATGCTCAGATGGAAAACAACTCATGGAAGATGTCGGTAACGAATTTGTGAAGATTTTCTTGATGAAGTCATTTTTCCAAGATGCAAAAGTGGGTGAAGATGGTGATATAGTTAGTTTCAAAATGCATGATCTTGCAACGCAAGTAGCTGGCAATGATTGTTGTTACATGGACAGTGAGGCGAAAAGATGTGAACAAAGACCCATGCATGTATCGTTGGAACCCAATGCACTTCATTTGTTGGACTCATTAGATGCAAGCAGATTGCGAACTTTGATTTTGTTGTCTTCCAATGAGGAGGAGGAATTGAACGGGGATGAATTGTCAATTATTTCAACATTCAAACACTTGCGTGTCTTGAAGCTGTCATGTTGTTCTTTAAGCAAGTTGTCTAGTTCAATTGGAAAATTGAAACATTTAAGATATCTTAACTTATCGCACTGTAGAGGACTGAAACGTCTTTACAAATCCTTTAGCAGACTTGTCTTGTTACAAACACTAATTTTGACACCTAATGAAAAAGTGAAGTTTTCTACAAAGGTTTTATCAAAGTTAATCAATTTGAGACACCTTCACATCTCTGATTGGGAAGCCTCCAAAGACAAGACACCATTTGGATTTGTAAAATTGAGCATTTGGCAGCATAAGGGAATGACTTCTTCAAACTGGATTTCTTCGCTGACAAATATAGTTGAAATCTCTTTCTTTTTGTGTGAAAGTCTCCAGTGTCTCCCACCGTTGGAGCATCTCCCATTCCTTAAGTCACTTGATATAAGTTTCCTTGAAGAACTGGAGTACATATATTATGAACAAGATTTTTCTTCAGCATTCTTCCCCTCTTTGGAGAGCCTCTCTTTGCAGTTTTGTTACAAGTTGAAGGGATGGCGGAGGGTGGGAGATGATTTTGATAATACTAACTGTTCACAAAATCTCTCCTTGCCTCCTTTTCCTCGTCTTTCTCAATTATCACTCATAGGATGTCTAATGTTGACTTGCATGCCTACCTTTCCAAATCTTGAGAACGGATTGGAATTGTATGATAGCAAGGTGGAAACATTGGTAGCAACACTAAACACAGTAGCATCAGAAATTTTAAATGACTTTCCTCCTCTTTCCGTGCTCAAATCCTTGCACATTGACGGAGTGAGCCTGGATGTGAAAAGTATCCCAAATGTTTGGATGCAAAATCTTACTTCTCTCCAGCTTCTTCAAATTAATTGGTTTTCATGTCAAGCATTTCAGGAAATCGAAATTTGGTTTAAGGATGACCTCAAGTATCTTCCTTCTCTACAAACAATTGCCTTTCATAATTGTGAAGACCTAGAAGCATTGCCAGATTGGATATGCAACCTCTCATCCCTTCAGCATCTTAGGGTGCATGATTGCATAAAGTTGGCATCACTGCCTGAAGGAATGCCCTGTCTAACCAACTTACAGACCCTAGAAATCATTGGATGTCCCCTCTTAGTTGAAAAATGTGAGACACAAACAGGTGAAACTTGGCCCAAAATTGGTCATGTCCCAAAGATAATCTTATCATCTCTTCATTAA 6048 0.3791 MDSSSSSPFSSPPSSPTSSFSSRASFSSRASFSSSSDSQWAHDVFINFTPKDDSKVFVSNLHTALGDAGIEPYTDYQFDKGPELGSELLEAIEYAHISIIVFSQNYTESSSCLNELEKIMECHSTHGNVVIPVFCGVDPSKVRHQNGAFGKKLHATAKESYLDRELRENMVFSWKNALNQAANLPGWDATYYRNDAELIPQIVKEVLGKLNSRLLPITEFQVGLDANEQRVIHFIENQASKVSLIGICGMGGSGKTTTAKAIYNQIHRNFLNTSFIENVAEVCERKKNKNSGIIDLQQQLLTDVLGTNVRISSIEYGKNMIRQRFSEKKILVVLDDVTTFEQLKALCGNPKMFAPGSVLIVTTRDEHLLKLVKVDCIFTIREMDENESLELFSWHAFRKASPEGGFSELSRTVAAYCGGLPLALEVLGSYLFDRTKQEWTSVLSKLERIPNDQVQEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKIGMHDLIRDMGREIVRESSAREPGKRSRLWFHDDVHDVLTKNTGTETVEALILNMQRTGRVSFSTNVFQDMKKLRLLQLDCVDLTGDFGYLSKQLRWVKWQRPTFNYVPNDFDQENLVAFELKHSNVKQVWKEPKLLQKLKILNLSHSRYLKSTPDFSKLPNLEKLIMKDCPSLSEVHSSIGDLNNLLLINLKDCSSLVNLPKKIYQLRSVKTLIISGCSKIVKLEEDIGQMISLTTLIAANTGVKQVPFSIARSKSIAYISLCGYEGLSHDVFPSIIWSWMSPTMNPLGHIPQFGGISTSLVSMDVDSNNLGLIYPSPILSSGSQLRCVWVQCHSEIHLKQELRRFLNDLTQLEISHASQISDLSLKSILIGMGSCHIVNEALSKSLSQGLATNDSIASFLPGNNYPSWLTYTSEGPSVYFQVPEDSDCGMKGITLCVIYSSTLENTATECLVSVLIINYTKFTIQIYKRDTVISFNDKDWECVVSNLAVGDNVEIFVAFGHGLTVKETAVYLIYGQSTTVEAQPSPDVKMESPLTINIRMTEQIPYAVAESLFNRLASATFLEYGRIYGVMDELERLKNSVECIRVVLLDAQEKQEQNWIRRLEDVLHRADDLLDEFIIEDIRYKGDAGDKKKMTHVFRPLSSNHLRQTMVPKIKKIQKKFDDVVEEIAKLNLIPTAVVVKQTDSLRSKSISFLLESDITGREDDKKEIINLLRQPHGNISSVAIVGIGGIGKTTIARFVYDDVEVKKHFEKQMWVCVSNNFDVKTIVKKMLESLINSKIDDKLSFEYIQHKLLENLTGERYLLVLDDIGNASHTKWTQLRTYLMCGAEDSRVLMTTRSKIVSEASNLYVLNGLTLDVSWSLLKKITFGNETSVVNQKLESIGTKIAEKCMGIPLAIRTLGGLLQNNSEEREWINVLHGDFWESCEDKESIMSILIFSYQSLSLQLRQCFAYCSLFPKDWEIQKDMLIQLCMAQGYLECSDGKQLMEDVGNEFVKIFLMKSFFQDAKVGEDGDIVSFKMHDLATQVAGNDCCYMDSEAKRCEQRPMHVSLEPNALHLLDSLDASRLRTLILLSSNEEEELNGDELSIISTFKHLRVLKLSCCSLSKLSSSIGKLKHLRYLNLSHCRGLKRLYKSFSRLVLLQTLILTPNEKVKFSTKVLSKLINLRHLHISDWEASKDKTPFGFVKLSIWQHKGMTSSNWISSLTNIVEISFFLCESLQCLPPLEHLPFLKSLDISFLEELEYIYYEQDFSSAFFPSLESLSLQFCYKLKGWRRVGDDFDNTNCSQNLSLPPFPRLSQLSLIGCLMLTCMPTFPNLENGLELYDSKVETLVATLNTVASEILNDFPPLSVLKSLHIDGVSLDVKSIPNVWMQNLTSLQLLQINWFSCQAFQEIEIWFKDDLKYLPSLQTIAFHNCEDLEALPDWICNLSSLQHLRVHDCIKLASLPEGMPCLTNLQTLEIIGCPLLVEKCETQTGETWPKIGHVPKIILSSLH* 2016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3797 2015 ProSiteProfiles TIR domain profile. 40 210 IPR000157 GO:0007165
Tpr4g3797 2015 Gene3D Ribonuclease Inhibitor 569 919 IPR032675 -
Tpr4g3797 2015 SMART till_3 41 184 IPR000157 GO:0007165
Tpr4g3797 2015 SMART AAA_5 1241 1376 IPR003593 -
Tpr4g3797 2015 SMART AAA_5 241 384 IPR003593 -
Tpr4g3797 2015 Pfam Rx N-terminal domain 1072 1152 IPR041118 -
Tpr4g3797 2015 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g3797 2015 Gene3D - 214 376 IPR027417 -
Tpr4g3797 2015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1207 1475 IPR027417 -
Tpr4g3797 2015 PRINTS Disease resistance protein signature 244 259 - -
Tpr4g3797 2015 PRINTS Disease resistance protein signature 324 338 - -
Tpr4g3797 2015 PRINTS Disease resistance protein signature 417 431 - -
Tpr4g3797 2015 PRINTS Disease resistance protein signature 655 671 - -
Tpr4g3797 2015 SUPERFAMILY L domain-like 523 887 - -
Tpr4g3797 2015 SUPERFAMILY Toll/Interleukin receptor TIR domain 32 187 IPR035897 -
Tpr4g3797 2015 CDD SIMIBI 243 335 - -
Tpr4g3797 2015 Gene3D - 1071 1182 - -
Tpr4g3797 2015 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 477 IPR027417 -
Tpr4g3797 2015 Gene3D - 382 466 IPR042197 -
Tpr4g3797 2015 Gene3D - 1376 1461 IPR042197 -
Tpr4g3797 2015 Coils Coil 1096 1116 - -
Tpr4g3797 2015 CDD RX-CC_like 1068 1186 IPR038005 -
Tpr4g3797 2015 Gene3D - 35 213 IPR035897 -
Tpr4g3797 2015 Pfam TIR domain 41 212 IPR000157 GO:0007165
Tpr4g3797 2015 SUPERFAMILY L domain-like 1564 1989 - -
Tpr4g3797 2015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1209 1440 IPR044974 GO:0006952
Tpr4g3797 2015 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 1036 IPR044974 GO:0006952
Tpr4g3797 2015 CDD AAA 1223 1359 - -
Tpr4g3797 2015 Gene3D - 1462 1551 IPR036388 -
Tpr4g3797 2015 Gene3D - 1204 1371 IPR027417 -
Tpr4g3797 2015 Gene3D Ribonuclease Inhibitor 1568 1840 IPR032675 -
Tpr4g3797 2015 Gene3D Ribonuclease Inhibitor 1841 1998 IPR032675 -
Tpr4g3797 2015 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1209 1440 - -
Tpr4g3797 2015 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 46 1036 - -
Tpr4g3797 2015 Pfam NB-ARC domain 1224 1462 IPR002182 GO:0043531
Tpr4g3797 2015 Pfam NB-ARC domain 231 455 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3797 Tpr-Chr4 43908325 43924286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3797 657 773 WRKY Transcription Factor Family AT4G12020 34.188 8.49e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3797 - - mtr:MTR_8g011850 2719.49