Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3796 ATGTCTTCATCATCATCATCCTCCACTTCTCAATGGATCTACGACGTTTTCCTTAGCTTCAGGGGGGAAGACACACGTCGTAACTTCGTTTCTCATCTCCACAAAGCCCTGTTAGATGCCAGAATCAACACTTTTCTGGACGATAAAAAGCTTGAAAAGGGAACTGAGCTGGGACCAGAACTAACGCGAGCAATAAAAGGTTCTCGTATTTCCATCGTTGTTTTCTCCAAAAACTATATCAGATCTAGTTGGTGTCTTAAAGAGCTTGTACAAATCATGGCATGCGCTAAAAACTGTGACCAGGTGGTGGTTCTGCCCATATTTTACCACGTTGACCCATCTCATTTGCGTTATCAGAAAGATGGTTATGGAAAAGCTTTGCAAGCTTCTGCAAAAGGGAGGAAACATTTGTTGAACGATTGGAAGATTGCACTAACCGAAGCTGCAACAATTATCGGTTGGGATGCCAAAAATGTTGGGACCGATGTTGAGCTAATTTCTCAAATTGTTGCCGACATTAAGAGAAAGCTAAACAGCAAATTATTGAATATTACTAAATATCCAGTTGGATTGGATACCCGTGTGCAACAAGTGATTCGGTTAATTGAAAACCGATCAAGTGAAGTTTGCATGATAGGGATTTGGGGGATGGGTGGATCGGGTAAAACAACAACAGTCACAGCTATCTACAACCAATTTCAATGCAAATTTGAGAATCATGGTTTCATTGAGAATATTAGAGAAGTATGTAATGGAGGTGTTAAAGGGATTAAACAATTACAGAAACAACTTCTTGCAGATGTTCTGAAATCAAATGAGAAAATATACGGCACTGCATCCGGGATAACAACAATTGAGAAAAGATGTACGGGGAAAAGGGCTCTCATTGTACTCGATGACGTGAGCACATTTGATCAAGTAGAAGCCCTGTGTGGAAATCGTAAATGTTTTGGTGCGGGAAGTGTATTGATTGTTACATCCAGGGATGTAAACATACTTAAGAAACTTAAAGTTGACTATATCTATAGCATAAAGGAAATGGATGAAATCAAGTCCCTTGACCTTTTCAGTTGCCATGCTTTTGGACAACGACGTCCAATTGAAGGCTTCAGTGAACTCTCAGAAAAGATAGTTGCTTGCTGTGGAGGATTACCACTGGCTCTTGAAGTCATTGGATCTTCCTTACATGACAGGACAATACAAGAATGGGAAAGTACACTATCAACATTGGAGAAAATTCCTGATGATCAAGTGCATAAGAAACTGAGAATAAGCTATGATGGTTTAAAGAATAATACAGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTGAGGATAGAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTTTGCTGATATTGGAATAACTGTTCTCATTGAGCGGAGCCTCGTAAAAGTTGAAAAGAATAACAAACTGGGAATGCATGGTTTGCTACGAGACATGGGAAGAGAAATTGTGTGTGAAAAATCAACAAAACTGCTTGGGAAGCGTAGTCGGTTGTGGTTTCATGAGGATGCACATAAAGTATTGACAGAAAATACTGGAACAGAAACTGTGGAAGGATTGGTTTTGGTGTCGCAAAGCACCAGCAATGTTTGTATCAAAACTGAGGCTTTCAAGGAGATGAAAAATTTGAAACTTTTACGACTTGATCATGTTGATCTTACTGGAGCTTTTAAGTATCTTTCTAAAGAACTGAGATGGCTCCATTGGCAGAGATTTACTCGCGAATATATACCTGATGACTTTTATCTGGGAAATCTAGTTGTTTTTGAGTTAAAACACAGCAATATTAAACGAGTTTGGAATGAAACCAAGTTGATGGACAAGCTGAAAATTCTCAATCTCAGTCATTCCAAGTACTTGACAAGCACTCCTGACTTTTCAAAATTACCAAATCTAGAAAAGCTCATTATGGAGGACTGTCCACACTTGTCTGAGGTACACCAGTCCATTGGGGATCTGAGCAAACTTCTTCTGATAAATTTGAAAGACTGTACAAGTCTTAGCAATCTCCCAGAGAAGATAAATCAGTTGACGTCTTTGACAACTCTCATCCTTTCTGGTTGTTCAAAGATTGACAGGTTGGAAGAAGGCATAGTGCAAATGGAATCCTTGACAACACTGGCCATAAATGATACAGGTGTGAAAGAGGAGCCATATTCTGTGGTAAGATTGAACAACATCGGGTATATATCTCTATGTGGATGTGAAGGATTAGCACAAGATGTTTTTTATTCTTTCATTCGGTCTTGGATGTCACCAACAATGAATTTGCCCCTTAGTAACTCGGACTTTCTAACACCAATAGTTAGGAGCCTTCAACAACTCAGAACTGTTTGGATACAGTGCCACTCAGAGAATCAACTAACTCAAGAATTAAAAATAATTTTTGATCAATTTGATATTAATTCTACTGAATCAGAAGCATTGCCAGTCCCAAATGATTCCTTGAGATCGCATTTGATTGGAATGAGAAGATTCTCCACAGTCATCTCCACAGTCATGGATACTCTTGGCAAGAGCGTATCACAGGGACTAACAACCAATGATTCGAGCAATTTTTTCCTTCCTGGTGGCAATCATTCTTCTTGCTTAGCCTATACAGGTGTAGGACCTTCAGCACCATTTCAAGTTCCTAAGGATATTGATTGTCGCATGGAGGGAATAGTCTTACGTGTTGTTTATTCATCAACATTTGTAAAGCTGGCAGATGAATGCCTTACTAGTGTCTTGATTGTTAATTACACAAAGTGCACCATCCATATTTACAAGCGAGACATAATCATGTCCTTTAATGATGAAGATTGGAAGAATTTAACATCAAATCTAGGACCTGGTGATGATGTGAAGATTTATGTAGCTTTTGGGCATGGATTGATTGTTAAGAAGACAATTGTGTATCTAGTATCTGGCCAGTCTATTATTGTGGAAGTTGATGATGCTAACATGGAAGTGGAGCCACCAGAGGAAGTGAACGTGCTGCCGTCCCCCGAAGTAAAGGTGAAGCAATCACCAAAGCCCAATAAAAGTAAATTTACAAGACTAGGTGCATTTTTACGCTTGAACTAG 3111 0.3899 MSSSSSSSTSQWIYDVFLSFRGEDTRRNFVSHLHKALLDARINTFLDDKKLEKGTELGPELTRAIKGSRISIVVFSKNYIRSSWCLKELVQIMACAKNCDQVVVLPIFYHVDPSHLRYQKDGYGKALQASAKGRKHLLNDWKIALTEAATIIGWDAKNVGTDVELISQIVADIKRKLNSKLLNITKYPVGLDTRVQQVIRLIENRSSEVCMIGIWGMGGSGKTTTVTAIYNQFQCKFENHGFIENIREVCNGGVKGIKQLQKQLLADVLKSNEKIYGTASGITTIEKRCTGKRALIVLDDVSTFDQVEALCGNRKCFGAGSVLIVTSRDVNILKKLKVDYIYSIKEMDEIKSLDLFSCHAFGQRRPIEGFSELSEKIVACCGGLPLALEVIGSSLHDRTIQEWESTLSTLEKIPDDQVHKKLRISYDGLKNNTEKDIFLDICCFFIGEDRAYVTEILNGCGLFADIGITVLIERSLVKVEKNNKLGMHGLLRDMGREIVCEKSTKLLGKRSRLWFHEDAHKVLTENTGTETVEGLVLVSQSTSNVCIKTEAFKEMKNLKLLRLDHVDLTGAFKYLSKELRWLHWQRFTREYIPDDFYLGNLVVFELKHSNIKRVWNETKLMDKLKILNLSHSKYLTSTPDFSKLPNLEKLIMEDCPHLSEVHQSIGDLSKLLLINLKDCTSLSNLPEKINQLTSLTTLILSGCSKIDRLEEGIVQMESLTTLAINDTGVKEEPYSVVRLNNIGYISLCGCEGLAQDVFYSFIRSWMSPTMNLPLSNSDFLTPIVRSLQQLRTVWIQCHSENQLTQELKIIFDQFDINSTESEALPVPNDSLRSHLIGMRRFSTVISTVMDTLGKSVSQGLTTNDSSNFFLPGGNHSSCLAYTGVGPSAPFQVPKDIDCRMEGIVLRVVYSSTFVKLADECLTSVLIVNYTKCTIHIYKRDIIMSFNDEDWKNLTSNLGPGDDVKIYVAFGHGLIVKKTIVYLVSGQSIIVEVDDANMEVEPPEEVNVLPSPEVKVKQSPKPNKSKFTRLGAFLRLN* 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3796 1036 Gene3D - 6 176 IPR035897 -
Tpr4g3796 1036 Pfam TIR domain 14 183 IPR000157 GO:0007165
Tpr4g3796 1036 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Tpr4g3796 1036 Pfam NB-ARC domain 194 420 IPR002182 GO:0043531
Tpr4g3796 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 441 IPR027417 -
Tpr4g3796 1036 Gene3D Ribonuclease Inhibitor 518 825 IPR032675 -
Tpr4g3796 1036 Gene3D - 347 430 IPR042197 -
Tpr4g3796 1036 SMART till_3 13 151 IPR000157 GO:0007165
Tpr4g3796 1036 PRINTS Disease resistance protein signature 211 226 - -
Tpr4g3796 1036 PRINTS Disease resistance protein signature 288 302 - -
Tpr4g3796 1036 PRINTS Disease resistance protein signature 381 395 - -
Tpr4g3796 1036 PRINTS Disease resistance protein signature 690 706 - -
Tpr4g3796 1036 ProSiteProfiles TIR domain profile. 12 177 IPR000157 GO:0007165
Tpr4g3796 1036 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 984 - -
Tpr4g3796 1036 SUPERFAMILY L domain-like 543 797 - -
Tpr4g3796 1036 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 984 IPR044974 GO:0006952
Tpr4g3796 1036 Gene3D - 177 341 IPR027417 -
Tpr4g3796 1036 SUPERFAMILY "Winged helix" DNA-binding domain 417 523 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3796 Tpr-Chr4 43901939 43907107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3796 189 740 WRKY Transcription Factor Family AT5G45050 32.642 1.19e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3796 - - mtr:MTR_8g011850 1179.47