Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3794 ATGGCTTCTTTTTCTTCTTCTTCTTCATCATCCTCCGATTCTCGATACATCTACGATGTGTTCATCAATTTTAGAGGAGAAGACACTCGCAAGTCTTTTGTTTCTCATCTCTATGCTGCCTTCTCAAATGCCGGAATCAACGCTTTCAACGACGTTGAACGACTTCTCAAGGGAACCGAAGTGAAAGCAGAACTATTGAGAGCAATAGAAAACTCTCGTATATCAATTGTTGTTTTCTCCACAAACTTCGCTGGATCTATTTGGTGTCTCAACGAGCTTGAAAAAATCATGCAATGCCGCGAAAACCATGGCCAAGTCGTTATACCAGTGTTTTACGACGTTGATCCATCGGATGTCCGTCGTCAACAGGGTGCTTTTGGAGAAGCTTTTGGAGAAACATTACAACAAACTGCAAAAAGTAGAAAACTGGGGGAATTGTCTCGTTGGAGGACGGCACTCATTGAAGCTACTAGTTTGTCTGGTTGGCATCTCGGCAATTCCAGGAGTGAAGCTGAAGTAGTGCAGCGTCTTGTTGAGGATCTTTTGAGAATGCTAAAGAGGACAATGAATATCACCCAATATCCAGTTGGATTGGATACCCGTGTGCAACAAGTGATTCAGTTTATTGAAAATCAATTCACCAAAGTTTCCTTGATAGGTCTCTGGGGTATGGGTGGATCGGGTAAAACAACAACAGCCAAAGCCATCTACAATCAAATTCATGGCAATTTCGTGAATAGAAGTTTCATTGGAAATGTTAGACAAATTTGCCAAAAGGAAAATAGCGGGATTATTCATTTACAACAACAACTTCTTTCAGACATCCTGAACACAAAGGAGACAATAGGTAGCATTGAAGAGGGGGAAATGATGATCAATCGAAGATTTCAGGGGAAAAGGGTACTCGTTGTACTTGATGATGTGACCACATTTGAACAGTTAGAACTGTTGTGTCGGAATCCTAATTTGTTTGGTCCAGGAAGTGTATTAATTGTTACAACCAGGGATGCACACCTGCTTAAGCTAGTTAAAGTTGACTATGTCTGTACAATGAAGGAAATGGATGAACAGGAGTCCCTTGAACTTTTCAGTTGGCATGCTTTTAAACATCATAGTCCAATGGAAAAATTCAGTGAACTCGCAAGGAAAACAGTTGCTTATTGTGGAGGATTACCACTGGCTCTTGAAGTCATTGGTTCTTACTTATATAAGAGGTCAAAAGAAGAATGGAAAAATGAACTCTTGAAATTAGAGAGAATTCCCAATGATCAAGTGCATCGGGTGCTGAGAATAAGCTATGATAGTTTAAATTATGATATGGAAAAGGATATATTTCTTGACATATGTTGTTTCTTTATTGGTATGGACAGAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAGCTGTCCTCATAGATCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGATTGGAATGCATGATTTAATAAGAGACATGGGAAGAGAAATTGTTCGTCAAAGTTCACCAAGAAAGCTAGGGGAGCGTAGTCGATTGTGGTTTCATGACGATGTGCATGATGTTTTGACAGAATATATTGGAACAGAAAATGTAGAGGGATTGGTTTTGAAGTCTCAAAGAACTGACAGTGTTTCCTTCGGTACTGATTCTTTCAAGAAGATGAAGAACCTCAGGCTTCTACAACTTGATCGTGTTAACCTCATTGGAAGTTATGAAAACCTTTCTAAAAAGCTGAAATGGGTTTATTGGCAAGGATGTACCTTAAACTATATACCTGACGAGTTTCATCTAGTAAATCTAGTTGTTTTTGAATTAAAACACAGCAATATTAAAGAGTGGAACGAAACCAAGGCGCTGGTGAATCTAAAAGTTCTCAATCTCAGTCATTCAAAATACTTGAAAAGCTCCCCGGACTTTTCAAAATTGCCAAATCTTGAAAAGCTCATTATGAAGGATTGTCCATGTTTGTCCGAAATACATCCATCCATTGGAGGTCTCAAGAATCTTCTTCTGATAAATTTGAAGGACTGTACAGGTCTTAACAATCTCCCAAAGAGGATCTATCAACTGAAATCTTTGAAAATTCTCATCCTTTCTGGTTGTTTGAAGATTGACAAAGACATAAAGCAGATGGAATCCTTGACAACACTGATTGCAAAAAATACAGCTATTAAAGAAGTTCCCTTTTCAATAATTGACGAGAAACATGCTGATGATTCACATGTTTTGAAGAATGATGTTGATACTAAGTCCAAAGGTGATCCCTCAAGGTGTGATATTCAAAGGGACGTGGATGAAGCAAGTAAAAGACACGTGGAAATTCTGAATCAATCAGAGGATGCTGATGAGAAGGGTGCTTTCCTGAATGATGTTGATGATGTCAACAGAAGGAGGGTCGAGCAAATTCCATATGCTATTGCTGAAAGCCTCTTTAACAGGTTGGCTTCCACTACTTTTCATGAACATGGACGGATTTATGGTGTTATAGATGAGTTGGAAAGGCTTAAGAACAGTGTCGAATCCATAAGAGCTGTGCTCCCTGATGCCCAGAAGAAACAGGAACAAGATTGTGCTGTACAAAATTGGATAACAAGCCTCAAGGATGTGCTTCATCTTGCAGATGACTTGCTTGATAAATTTATTATTGAAGGTATGAGATACAAAGAGGATGCAAGTGATAAGAACCAACTGACATGGGGTCATTCATCAAGCCATAATTTTCTACACCAAAAAGTGGCTCCTGAAATTGAAAAAATACAAAAAAAGTTTGATGATGTGCTAGAAGAAATGGATATGTTGAAATTAAGCCCAAAAGCTGCGGTGGTTAAGCAAACTGACAGTTTAAGGAGCAAATCTATTTCTTTTTTGTTAGAAAATGATATCACTGGCAGAGATGATGACAAAGAGGAGATTATAAATCTCTTGAGGCAACCACATGGAAATATCTCGTCAATTGCCATTGGAGGTATTGGAGGTATAGGCAAGACAACTCTTGCTCAACTTGTATATAATGATGTGGAAGTGCAAAATCATTTTGAAAAGCGAATGTGGGTATGTGCATCAAATCACTTTGATGTCAAGACTATTGTGAAAAAAATGCTGGAGTCATTAATCGATAGCAAAATTGATGCTAAGTTATCATTTGAATACATACAGCATAAACTTCGTGAAAGTTTAACCGGTGAAAGGTACTTGTTAGTCTTGGATGACATTTGCAATGGTAGCCATGAAAATTGGACTCAATTGAGAACTTATCTAATGTGTGGTTCTAAAGATAGTAAGGTTTTAATGACAACTCGCAGTAAAAATTTGTCAGAGATACCCAAAGCAAGCAACCTCTGGGTTTTGAATGGTTTGACTCTAGATGTATCTTGGAATATGTTAAAGAAAATTACATTTGGGAAAGATACCAGTGTAGTGAATAAAAAATTTGGATCAATTGGTAAAAGAATTGCAAATAAGTGCAGGGGAGTTCCACTAGCAATTAGAGCACTGGGAGGCCTATTACAGAGTAAAAGTGAAGAAAGGGAATGGATCAATGTCTTACAAGGCGACTTCTGGAAATTATGTGAAGACAAAGAATGCATCATGCCAATTCTGAAATTGAGTTACCAGAGTTTGTCGCTTCGGTTGAGACAATGTTTTGCTTATTGCGCTTTATATCCTAAGGATTGGGAAATCAAGAAGGATTTGTTGATTCAACTTTGGATGGCACAGGGCTATCTTGACTGCACAGATGAAAAAACACTCATGGAAGATGTCGGTAACGAATTTGTGAAGATTTTCTTGATGAAGTCATTTTTCCAAGATGCAAAAGTGGGAGAAGATGGTGATATAGTTAGTTTTAAAATGCATGATCTAATGCATGATCTTGCAACACAAGTAGTTGGAAATGATTGTTGTTATTTGGATAGGGAGACAAAGATATGGGGACAAAGACCCATACACGTATCGTTGGAGCCCAATGCAGTCCATTTGTTGGACACATTAGATGCAAGCAGACTGCGAACTTTGATTTTGCTGTCTTCCAACGAGGAGGAGGAATTGAATGGGGATGAATTGTTGGTTATTTCTAAATTCAAACACTTACGTGTCTTGAAGCTGTCACATTGTTCTTTAAGCAAGTTGTCTACTTCAATTGGAAAATTGAAACATTTAAGATATCTTAACTTATCACACTGTAGAGGACTAGGAAGTCTTTACAAATCCATTAGCAGTCTTGTTTTGTTACAAACACTGATATTGACACCTAAGGAAAAATTTGAGTTTTCTACGGAGGTTGTATCAAAATTAATCAATTTAAGACACCTTCACATCTCTAATTGGGAAGCCTCCAGAGACGAGAGACCATCTGAATTTGTAAAATTAAGCATCTGGAAATATGAGGGTATGGTTTTTTCAAAATGGCTTTCTCCACTCACAAATATTGTTGAAATATCTTTCTTTTTGTGTGGAAGTCTCCAGCATCTCCCACCGTTGGAACATCTCCCATTTCTTAAGTCCCTTCATATAAGTTTCCTTGAAGAACTGGAGTACATATATTATGAACAACAAGATTTTACTTCAGCATTCTTTCCATCTTTAGAGAGCCTCACTTTGCAGTTTTGTTACAAGTTGAGGGGATGGTGGAGGATGGGAGACGATTTCAATAATACTACCTGTTCACTAAATCTCTCCTTGCCTCCCTTTCCTCGTCTCTCTCAATTATCAATCATAGGATGTCGGATCTTGACTTTCATGCCTGCCTTTCCAAATCTTGAGAACAGATTGGAATTGTACAATAGTAGTGTGGAAACCTTGGTAGCAACACTGAGCACAGTAGCATTAGAAAGTTTGAATGACTTCCCTCCTCTCTCCATGCTCAAATCCTTGCACATTGACGGAGTGAACCTGGATGTGAAAAGAATCCCAGCGGATTGGATGCAAAATCTTACTTCTCTCCAGCTTCTTCAAATTAATTGGTTTTCTTGTCAAGCATTTCAGGAAATCGAAACTTGGTTTAAGGATGACCTCAAGTGTCTTCCTTCTCTACAAACAATTACCTTTCATAATTGCGAAGACCTAGAGGCATTGCCAGATTGGATATGCAACTTCTCATCGCTTCAGCATCTTAGGGTGTATGATTGCATAAATTTGGTATCCCTGCCTGAAGGAATGCCCTGTCTAACCAACTTACAGACCCTAGAAATCATTGGGTGTCCCCTCTTAGATGAAGAATGCCAGGCAAAAACAGATGAAACATGGCCCAAAATTCGTCATGTGCCAATGATAATCTTATCATCTCTTCATTAG 5316 0.3832 MASFSSSSSSSSDSRYIYDVFINFRGEDTRKSFVSHLYAAFSNAGINAFNDVERLLKGTEVKAELLRAIENSRISIVVFSTNFAGSIWCLNELEKIMQCRENHGQVVIPVFYDVDPSDVRRQQGAFGEAFGETLQQTAKSRKLGELSRWRTALIEATSLSGWHLGNSRSEAEVVQRLVEDLLRMLKRTMNITQYPVGLDTRVQQVIQFIENQFTKVSLIGLWGMGGSGKTTTAKAIYNQIHGNFVNRSFIGNVRQICQKENSGIIHLQQQLLSDILNTKETIGSIEEGEMMINRRFQGKRVLVVLDDVTTFEQLELLCRNPNLFGPGSVLIVTTRDAHLLKLVKVDYVCTMKEMDEQESLELFSWHAFKHHSPMEKFSELARKTVAYCGGLPLALEVIGSYLYKRSKEEWKNELLKLERIPNDQVHRVLRISYDSLNYDMEKDIFLDICCFFIGMDRAYVTEILNGCGLYADIGIAVLIDRSLLKVEKNNKIGMHDLIRDMGREIVRQSSPRKLGERSRLWFHDDVHDVLTEYIGTENVEGLVLKSQRTDSVSFGTDSFKKMKNLRLLQLDRVNLIGSYENLSKKLKWVYWQGCTLNYIPDEFHLVNLVVFELKHSNIKEWNETKALVNLKVLNLSHSKYLKSSPDFSKLPNLEKLIMKDCPCLSEIHPSIGGLKNLLLINLKDCTGLNNLPKRIYQLKSLKILILSGCLKIDKDIKQMESLTTLIAKNTAIKEVPFSIIDEKHADDSHVLKNDVDTKSKGDPSRCDIQRDVDEASKRHVEILNQSEDADEKGAFLNDVDDVNRRRVEQIPYAIAESLFNRLASTTFHEHGRIYGVIDELERLKNSVESIRAVLPDAQKKQEQDCAVQNWITSLKDVLHLADDLLDKFIIEGMRYKEDASDKNQLTWGHSSSHNFLHQKVAPEIEKIQKKFDDVLEEMDMLKLSPKAAVVKQTDSLRSKSISFLLENDITGRDDDKEEIINLLRQPHGNISSIAIGGIGGIGKTTLAQLVYNDVEVQNHFEKRMWVCASNHFDVKTIVKKMLESLIDSKIDAKLSFEYIQHKLRESLTGERYLLVLDDICNGSHENWTQLRTYLMCGSKDSKVLMTTRSKNLSEIPKASNLWVLNGLTLDVSWNMLKKITFGKDTSVVNKKFGSIGKRIANKCRGVPLAIRALGGLLQSKSEEREWINVLQGDFWKLCEDKECIMPILKLSYQSLSLRLRQCFAYCALYPKDWEIKKDLLIQLWMAQGYLDCTDEKTLMEDVGNEFVKIFLMKSFFQDAKVGEDGDIVSFKMHDLMHDLATQVVGNDCCYLDRETKIWGQRPIHVSLEPNAVHLLDTLDASRLRTLILLSSNEEEELNGDELLVISKFKHLRVLKLSHCSLSKLSTSIGKLKHLRYLNLSHCRGLGSLYKSISSLVLLQTLILTPKEKFEFSTEVVSKLINLRHLHISNWEASRDERPSEFVKLSIWKYEGMVFSKWLSPLTNIVEISFFLCGSLQHLPPLEHLPFLKSLHISFLEELEYIYYEQQDFTSAFFPSLESLTLQFCYKLRGWWRMGDDFNNTTCSLNLSLPPFPRLSQLSIIGCRILTFMPAFPNLENRLELYNSSVETLVATLSTVALESLNDFPPLSMLKSLHIDGVNLDVKRIPADWMQNLTSLQLLQINWFSCQAFQEIETWFKDDLKCLPSLQTITFHNCEDLEALPDWICNFSSLQHLRVYDCINLVSLPEGMPCLTNLQTLEIIGCPLLDEECQAKTDETWPKIRHVPMIILSSLH* 1772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3794 1771 Gene3D Ribonuclease Inhibitor 1556 1757 IPR032675 -
Tpr4g3794 1771 Pfam Rx N-terminal domain 816 899 IPR041118 -
Tpr4g3794 1771 Gene3D Ribonuclease Inhibitor 1325 1555 IPR032675 -
Tpr4g3794 1771 Gene3D Ribonuclease Inhibitor 529 760 IPR032675 -
Tpr4g3794 1771 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Tpr4g3794 1771 Coils Coil 840 860 - -
Tpr4g3794 1771 Gene3D - 952 1119 IPR027417 -
Tpr4g3794 1771 SMART till_3 17 159 IPR000157 GO:0007165
Tpr4g3794 1771 CDD RX-CC_like 812 934 IPR038005 -
Tpr4g3794 1771 Gene3D - 11 188 IPR035897 -
Tpr4g3794 1771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 448 IPR027417 -
Tpr4g3794 1771 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 744 IPR044974 GO:0006952
Tpr4g3794 1771 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 960 1216 IPR044974 GO:0006952
Tpr4g3794 1771 Gene3D - 1212 1303 IPR036388 -
Tpr4g3794 1771 Gene3D - 189 348 IPR027417 -
Tpr4g3794 1771 Pfam NB-ARC domain 973 1213 IPR002182 GO:0043531
Tpr4g3794 1771 Pfam NB-ARC domain 200 433 IPR002182 GO:0043531
Tpr4g3794 1771 Pfam TIR domain 18 190 IPR000157 GO:0007165
Tpr4g3794 1771 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Tpr4g3794 1771 Coils Coil 924 944 - -
Tpr4g3794 1771 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 21 744 - -
Tpr4g3794 1771 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 960 1216 - -
Tpr4g3794 1771 SUPERFAMILY L domain-like 1280 1595 - -
Tpr4g3794 1771 Gene3D - 815 932 - -
Tpr4g3794 1771 PRINTS Disease resistance protein signature 218 233 - -
Tpr4g3794 1771 PRINTS Disease resistance protein signature 295 309 - -
Tpr4g3794 1771 PRINTS Disease resistance protein signature 388 402 - -
Tpr4g3794 1771 PRINTS Disease resistance protein signature 625 641 - -
Tpr4g3794 1771 SUPERFAMILY L domain-like 494 739 - -
Tpr4g3794 1771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 955 1226 IPR027417 -
Tpr4g3794 1771 Gene3D - 1127 1211 IPR042197 -
Tpr4g3794 1771 Gene3D - 353 437 IPR042197 -
Tpr4g3794 1771 SUPERFAMILY RNI-like 1564 1746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3794 Tpr-Chr4 43862372 43883358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3794 9 739 WRKY Transcription Factor Family AT4G12020 30.515 1.24e-77 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3794 - - mtr:MTR_8g037220 1580.07