Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3793 ATGGCTGATTTGATTGTATCCACCGTTAACAGGTCGATTATCGGATCCTTTCGTATAATTGGACGGATTTATGGTGTTGATTTGGAAAAGTTTAAGAATGACGTTGAATCCATCAAAGCTATGCTCCATGATGCCGAAGACAACCAAGAAAAAGATGAGCATATACGAAATTGGATAAGAGCAGTCAAAGATCATGTACTTCATCCTGCTGATAACTTGCTTGATGAATTTCTTATTGAGGATATGAGATACAAAATGGAAACTCATAAGAGCAATGCGATACAGGTTTATCATTCCTCATTTCGAAACCAAATTGTTTTTCGCAGTAAAATGGTTAGTAAGATTGGAAGAATACAAAAGAAAATTAATGAGCTCCGGATATTTCCGATGGTGTATCGTGTTCGAGCTAGAAATCATGCGGTGGTTGAACAAATGAAGCATCCTGATCTAGCTAAAAAGGATGTGGTGGTTGAACAAAATATAAGCGAAACGAGGGAAGCTTGTTCTTTCGTGTTCAAATCATTAGATACCATTGGAAGAGAAGATGATAAAAAGAAGATTATAAGCTTGTTGAAGCAACCACATGGAGATCAACATGACTCTGTGATTGCTATTGTTGGGATTGGTGGTATCGGAAAGACAACTCTTGCTCAGTTGGTATACAATGATGGTGAAGTAACTAAGTTTTTTGAAAAGAATATGTGGGTATGTGTCTCTGATAACTTCAATGTCAAAACTATTGTGAAGAAAATGTTGGAGTCATTAATCAATAGCAAAATTGATGATAAGTTATCAGCGGACAACTTGCATAATATGCTTCGTGATAATTTAACTGGTAAGAGATACTTGTTAGTCCTAGATGACGTTTCGAATGAGAGTTTTGAAAAATGGGCTCAATTGAGGACTTATTTGATGTGTGGTGCTAAAGACAGTAAGATTGTAGTGACAACTCGTAGTATAAATGTGGCAACAACAATGGGTGTAAGTGTGCCCTACATTTTGAAGGGTTTGACTATCGATGAATCTTGGAATCTGTTGAAGAACATCATTACAAATGGAGATGAGACCGAAGGAGTGAATCAAACTCTTGAATTAATTGGCAAGAAGATAGCAGAAATGTGCAAAGGTGTTCCACTAGCAATAAGAACAACGGGAGTCCTACTACAAGGTAAAAATGAAGAAAAGGAATGGTTTCTTATTCTACATGATGACATGTTGAATATACATGAAGATAACATCATGTCAGTGTTGAAACTGAGTTACAAAAATTTATCGCCACAATTGAAACTATGTTTTGCTTACTGCTCTTTATATCCTAAGGGTTGGCAAATAGAGAAGGATGAGTTGATTCAATTGTGGATGGCACAAGGTTATCTCGAATTTTCAGGTGAACATGATTCCATGGAAGACATCGGCAACCAATTCGTGATGACTTTCTTGAAGAAGTTATTTTTTGAAGACGCAAAAATGGATGATGATGGTCATGTTTATAGTTTCAAAATGCATGATTTAATGCATGATCTCGCAATGTACGCAGCCGATGGTGATTGTTGTTATTTGGATAGTGAGACAAAAGGACTTGTAAGAAGTCCTGTGCATGTATCATTGAAACCCAAAGCAGTTCACTTGTTGGACTCATTAGATAGAAGCAGGCTACGGACTTTGATTTTGCTGTCTTCTGACGAGGAGGAAGAATTGAAAAGGGATGAATTGTTTGTTATTTCAAATTTCAAATACTTGCGTGTCTTGAAGCTTTCATATTCATGTTTAAGCATGTTGTCTGAGTCAATTGGAAAATTGAAACATTTAAGATATCTTAACTTATCTCGCTGTACAGGATTGGGGAGTCTTTTCAAATCCATTAGTATTATTGTCTTGTTACAAACACTAATATTGATGCCGGATGAAAAAGTTGAATTTTCTACAATGGCTATCTCAAAACTAATCAATTTAAGACACCTTCAGATCTCTGATTGGGAAGCCTCTAAAGTTAAGAATCCAGATGGATTTGAAAAGTTGAGCATGCAGCTATACAAAGGTCTGATTTCTCTCCCACGGCTGTACAAGGGTATGAATTTTTCCAACTGGCTTTTTCCACTCTCAAATATTGTCGAAATTTCTTTGTTTTTGTGTGGAAGTTTTCGGTATCTCCCGCCATTGGAAAGTCACCGATTCCTTAAGTCACTTCATATAAGTCACCTTGAAGAACTAGAGTACATATATTATGAAGAGGCTCTTCCTGTAACATTCTTTCCATCTTTGGAGAGCCTCACTATTTGGTTTTGTGGAAAGTTAAAGGGATGGTGGAGGGTGTTAGATGATTTTAATCATCCTAACTCTTCACGTCATATCTCTCTGCCTCCCTTTCCCCGTCTTTCTCAATTATCAATCATAGGATGTCAGATGTTGACTCAAATGCCTACGTTTCCAAACCTCGAGAGCAGGTTGGAATTGTTTGATAGTAGTGGGGAAACATTGGAAGCAACACTAAACATGGTAGCATCAGAATGTCCGAATGACTCCCCTCCTCTTTCCATGCTCAAATCCTTGCACATTGATGGAATGGGTTTGGATTTGGAAAAAGTCCCGAAGGATTGGATACAAAATCTTACTTCTCTCCAGCATCTTCAAATTAATTGGTTTAGTTGTGAAATATTTCAAGAAATCAGTGTTTGGTTTAAGGACAACCACAACTGCCTTCCTTCCCTGCAAAAACTTGCCTTTCATAATTGTGAAGACCTAGAGGCTTTGCCAGATTGGATATGCAACCTCTCATCACTTATGCATCTCTCGATGTATGATTGCATAAATTTGGCATCACTGCCTGAAGGAATGCTTTGTCTTAGCAACTTACAGACCTTGGAAATCATCGGTTGCCCCATCTTAATTGAAGAATGCGAGACACAAACAAGTAAAGTTTCAACCAGAATAGCTCACATACCAAAAATAATTTTGAAGTGA 2961 0.3728 MADLIVSTVNRSIIGSFRIIGRIYGVDLEKFKNDVESIKAMLHDAEDNQEKDEHIRNWIRAVKDHVLHPADNLLDEFLIEDMRYKMETHKSNAIQVYHSSFRNQIVFRSKMVSKIGRIQKKINELRIFPMVYRVRARNHAVVEQMKHPDLAKKDVVVEQNISETREACSFVFKSLDTIGREDDKKKIISLLKQPHGDQHDSVIAIVGIGGIGKTTLAQLVYNDGEVTKFFEKNMWVCVSDNFNVKTIVKKMLESLINSKIDDKLSADNLHNMLRDNLTGKRYLLVLDDVSNESFEKWAQLRTYLMCGAKDSKIVVTTRSINVATTMGVSVPYILKGLTIDESWNLLKNIITNGDETEGVNQTLELIGKKIAEMCKGVPLAIRTTGVLLQGKNEEKEWFLILHDDMLNIHEDNIMSVLKLSYKNLSPQLKLCFAYCSLYPKGWQIEKDELIQLWMAQGYLEFSGEHDSMEDIGNQFVMTFLKKLFFEDAKMDDDGHVYSFKMHDLMHDLAMYAADGDCCYLDSETKGLVRSPVHVSLKPKAVHLLDSLDRSRLRTLILLSSDEEEELKRDELFVISNFKYLRVLKLSYSCLSMLSESIGKLKHLRYLNLSRCTGLGSLFKSISIIVLLQTLILMPDEKVEFSTMAISKLINLRHLQISDWEASKVKNPDGFEKLSMQLYKGLISLPRLYKGMNFSNWLFPLSNIVEISLFLCGSFRYLPPLESHRFLKSLHISHLEELEYIYYEEALPVTFFPSLESLTIWFCGKLKGWWRVLDDFNHPNSSRHISLPPFPRLSQLSIIGCQMLTQMPTFPNLESRLELFDSSGETLEATLNMVASECPNDSPPLSMLKSLHIDGMGLDLEKVPKDWIQNLTSLQHLQINWFSCEIFQEISVWFKDNHNCLPSLQKLAFHNCEDLEALPDWICNLSSLMHLSMYDCINLASLPEGMLCLSNLQTLEIIGCPILIEECETQTSKVSTRIAHIPKIILK* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3793 986 SUPERFAMILY L domain-like 500 814 - -
Tpr4g3793 986 Gene3D - 158 332 IPR027417 -
Tpr4g3793 986 Pfam NB-ARC domain 180 431 IPR002182 GO:0043531
Tpr4g3793 986 Pfam Rx N-terminal domain 27 91 IPR041118 -
Tpr4g3793 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 435 IPR027417 -
Tpr4g3793 986 PRINTS Disease resistance protein signature 202 217 - -
Tpr4g3793 986 PRINTS Disease resistance protein signature 276 290 - -
Tpr4g3793 986 PRINTS Disease resistance protein signature 374 388 - -
Tpr4g3793 986 PRINTS Disease resistance protein signature 598 614 - -
Tpr4g3793 986 Coils Coil 28 48 - -
Tpr4g3793 986 Gene3D - 337 420 IPR042197 -
Tpr4g3793 986 SUPERFAMILY RNI-like 785 961 - -
Tpr4g3793 986 Gene3D Ribonuclease Inhibitor 790 978 IPR032675 -
Tpr4g3793 986 Gene3D Ribonuclease Inhibitor 542 786 IPR032675 -
Tpr4g3793 986 Gene3D - 21 118 - -
Tpr4g3793 986 PANTHER OS05G0414200 PROTEIN 28 915 - -
Tpr4g3793 986 Gene3D - 421 511 IPR036388 -
Tpr4g3793 986 PANTHER DISEASE RESISTANCE PROTEIN RP 28 915 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3793 Tpr-Chr4 43850421 43855192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3793 203 476 WRKY Transcription Factor Family AT5G45050 27.063 1.60e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3793 - - mtr:MTR_8g037220 1119.38