Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3771 ATGTCAATGGCGATTACAGCCATGGCTTCACTACCAACAACAACAAGAGCTTGTCTTCCAACTCCTTCAACTTCACCTCACACAATCACCACCTTCTCAAAACCTCAATTTAAACGCATATCATTACCAACTTCAACCACCATTTCACTACTTTCTCTCTTCACCATTCCAAATGAAGCCAGAGCTGCCATACCCGTGGACCAGATTGTTTCTTCTATCACCCTAGTGGAGCAAACAATTGATCAGGTTCAAGGTTTTTTGGACTCGGCAGAACGTGGTCTTGAAGCTATAGCGAATTTTTTGAAGCCGGGAATCGATGCCGGGTTGCCAATTGTGCAGCAGGCTGGGACAGAAGCTTTGAAATTTGCTTCACCAGCTTTCTCTGAGGCTTCTAAGAAGGCTCAAGAAGCACTTCAAAGCTCTGGTCTTGATACTCAACCTGTTCTCACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACATCCCAGGCGATTGAAGGTGCCAAGCCAATAGCCTCGTCAACTATCGAAACCATATCTACTTCAGATCCTACTGTGATTGCTGGATCATCCGGTGCATTATATGTTGCATATCTCTTGTTTCCTCCAATCTGGTCTGCCATTTCCTTCAACTTTCGCGGTTACAAAGGTACTACCGTTGACATGTTTCCATGCGAATTTTTTCTGCTTGTATTGTATGGTTACACAAAACCAATGGACTTGTTAATTTCCAATCCTCTCTGGCCCGGGAAGCCGAGAATGTTAACCATCAGGAGCACGAAGAAGAAGCGCCTTATGTCAAACAACATTTTTCTTTGGCTGATGCTTGTGCTTTTCTTTGAATTTGCAGGAGACCTAACACCAGCTCAAACACTTGATTTGCTATCCACACAAAACTACGTTTTGATTGATGTTAGGTCAGAGAAGGATAAGGACAAGTCTGGTATTCCTCGCCTTCCGTCTAGCGCTAAAAACAAGATGGTTGCTATTCCATTGGAAGAAGTGCCAAGCAAGATAAAAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCGGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATTAACAAAGGCTCAAACATTGTGATATTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCAAGAAAGCTAAAGGGGCTTGGATTTAAGAACACATGGATAGTTGCTGATGGATTTTCTGGAGGCAAAGGGTGGTTACAAAGTAGATTAGGAACGGATTCGTATAAAGTTTCGTTTGCAGAGATCTTGTCTCCATCAAGAATCATCCCTGCAGGTGGTACTAGAAGTTTTGGAACAACCAGCAGGCAGAAACTTCTTACTGGAGCTGACTGA 1365 0.4337 MSMAITAMASLPTTTRACLPTPSTSPHTITTFSKPQFKRISLPTSTTISLLSLFTIPNEARAAIPVDQIVSSITLVEQTIDQVQGFLDSAERGLEAIANFLKPGIDAGLPIVQQAGTEALKFASPAFSEASKKAQEALQSSGLDTQPVLTAAKTVADAAQQTSQAIEGAKPIASSTIETISTSDPTVIAGSSGALYVAYLLFPPIWSAISFNFRGYKGTTVDMFPCEFFLLVLYGYTKPMDLLISNPLWPGKPRMLTIRSTKKKRLMSNNIFLWLMLVLFFEFAGDLTPAQTLDLLSTQNYVLIDVRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPSKIKGLVRNVKRVEAEIAALKISYLKKINKGSNIVILDSYSDSAKIVARKLKGLGFKNTWIVADGFSGGKGWLQSRLGTDSYKVSFAEILSPSRIIPAGGTRSFGTTSRQKLLTGAD* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3771 454 Gene3D - 284 424 IPR036873 -
Tpr4g3771 454 ProSiteProfiles Rhodanese domain profile. 297 418 IPR001763 -
Tpr4g3771 454 SMART rhod_4 287 415 IPR001763 -
Tpr4g3771 454 Pfam Rhodanese-like domain 289 405 IPR001763 -
Tpr4g3771 454 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 275 411 IPR036873 -
Tpr4g3771 454 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 17 220 - -
Tpr4g3771 454 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 283 448 - -
Tpr4g3771 454 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 17 220 IPR044690 GO:0009704|GO:0071277|GO:0090333
Tpr4g3771 454 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 283 448 IPR044690 GO:0009704|GO:0071277|GO:0090333
Tpr4g3771 454 CDD RHOD 291 405 - -
Tpr4g3771 454 Coils Coil 340 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3771 3 376 Sulfurtransferasese or Rhodanese AT5G23060 51.181 2.72e-110 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3771 - - gmx:100813363 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3771 4 43643358 43646582 Tpr4g3771 4 43643358 43646582 ECH