Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3768 ATGGCTGGTGGAGGAAGAAGAAGACATCATCATTTCAGTAAGATTCATGCATTTTCATGTGGTAAAGCATCAATGAAACAAGATGAACATTCACTTATAGGAGGACCTGGTTTTTCAAGAAAAGTTTATTGTAATGATTCAGAACGTGCTATGTCTAGTCTTTATAATTATGGTGATAATTATGTTAGAACTACTAAGTATACACTTGCTACTTTTCTACCTAAATCTTTGTTTGAACAATTTAGAAGAGTTGCAAATTTTTACTTCTTAGTTGTTGCTGTTTTGTCTTTCTTCCCTGTTGCTCCTTATTCTGCTGTTAGCAATGTTGTTCCTCTTCTTGTTGTGGTTTCTGCTACTATGGCTAAAGAGTTTATTGAAGATTTTCAGAGAAAAAAACAGGATATAGAAATGAATAATCGAAAAGTGAAAGTACATAGTGGAGGTGGTGTTTTTGATTATTCTAAATGGAGAGATTTAAAAGTTGGAGACATCGTGAAAGTGGAAAAAGATGAGTATTTTCCTGCTGATCTCATATTACTTGCATCAAACTATGATGATGCAATTTGCTATGTTGATACGATGAATCTCGACGGAGAAACAAATCTGAAACTAAAACAAGCACTAGAAGGGACTTCAAAATTTCAAGAAGACTCGAATTTTGAGAATTTCAAGGCTGTGATAAGATGCGAAGATCCAAACGCGAATTTGTATGCGTTTGTAGGAAGTTTAGAGCTTGAAGAAGATCAAGAAGATCAACAATATCCACTTGCACCTCAGCAGCTTCTTCTAAGAGACTCTAAGTTGAAGAACACAGATTTTATCTATGGTGTTGTGATCTTTACCGGTCACGATACAAAGGTTATGCAGAATTCAACAGATCCTCCATCCAAGAGAAGTAAGATTGAGAAAAGAATGGACAAAGTTATATACTGTTTGTTCTTTGTATTGATTTTGGTTTCATTTATCGGTTCGATTTTCTTCGGTATTTGGACAAAGAAGGATATTAAAAATGGAAGAATGAAGAGATGGTACCTTAATCCTAAAGATACTACAGTTTACTATGATCCTCATAAAGCAGTACTTGCAGCAATTTATCATTTCTTGACAGCTTTGATGTTGTATGGTTACTTCATTCCGATTTCGTTGTATGTTTCCATTGAAGTTGTGAAGGTTCTTCAAAGCATTTTCATCAACAACGATTTGAACATGTATCACGAGGAAACTGATAAGCCAGCGCATGCTCGTACGTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACCATACTTTCGGATAAAACTGGAACATTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGGTGGAGTTGCTTACGGAAGAGGATTTACAGAAGTTGAGAGAGCTTTATCTAAGAGAAAAGATTCATACTTTGGTCGGAAGTTGAAAAATGACCAAAATGTTGCAAAAGCTGCTGAATCAAAATCAACCATTAAAGGATTTAACTTCAGTGATGAAAGGATCATGAATGGAAATTGGGTGAGACAGCCTAATGCCAATGTGATACAAAGCTTTCTAAGGGTATTGGCGGTATGCCATACCGCAATACCTGAAGTTGATGAAGCAACTGGTAAAATTTCGTATGAAGCTGAATCGCCAGACGAGGCTGCTTTTGTTGTTGCGGCAAGAGAATTTGGATTTGAATTTTATGAAAGGACACATGCAGCTATTTCACTTCATGAATTAGACCTCAATTCAAACATGAAATCAGAAAGGTCCTACAATATTTTAAATGTATTAGAGTTTAGTAGTGCAAGAAAGCGAATGTCCGTAATCATAAGAGACCACAAGGGAAAACTAATGCTACTTAGCAAAGGAGCTGACAGTGTCATGTTTGAACTACTTGGAAAGAATGGAAGGGAGTATGAAGAGCAGACTAAGTACCACATTAATGAATATGCCGATTCTGGTTTGAGGACATTGATACTTGCTTACCGTGAACTTGACGAGGAAGAGTACAAACAGTTTAATAAAGAGTTGACAGATGCTAAAAACTTAGTGAGTGCAGATCAAGAGCAGATTGTAGAAGACATATTGCAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACCGCAGTTGAAGATAAACTACAAGACGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCCGGGATTAAGTTATGGGTATTGACCGGTGATAAAATGGAGACAGCGATTAATATTGGATTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAAATTATAATTAATTCAGATACTCCTGAAAACAAAGCGCTCGAGAAAATGGAGGACAAATCTGCTGCTGAAGCGGCAATTAAGGCAAGTGTTGTTCGTCAAATAACGGAGGCAAAGACGTTTCTTTCAAGATCAGATGACAATTCTGAGGCATTAGCTTTGATTATTGATGGGAAATCTCTTGCTTATGCGCTAGAAGACGATGTAAAGAACTTGTTTCTTGAACTTGCAATTGGTTGCGCATCTGTTATATGCTGTCGTTCCTCACCAAAGCAAAAGGCACTTGTTACTAGATTGGTTAAGATGAGACCTGGTAGTACAACTCTAGCTATTGGAGATGGTGCAAATGATGTTGGTATGCTCCAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTCGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCCATTGCTCAATTTCGATATCTCGAACGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCTATGATATGTTACTTCTTTTACAAGAATATCACCTTCGGCTTCACTTTGTTCTTCTATGAGATGTTTACCTCATTCTCCGGCCAACCTGCATACAATGACTGGTTCATGTCATTTTATAATGTATTCTTCACTTCACTTCCTGTAATTGCTTTGGGAGTTTTCGACCAAGATGTCTCCTCCAAATTATGTCTCAAGTTTCCATTACTATACCAAGAAGGTGTACAAAACTTACTATTCAGCTGGAAAAGAATAATTGGTTGGGCATTAAACGGAGTTACAAGTTCAACCATTATATTTTTCTTCTGTATTCGCGCGCTTGAGCATCAATCGTTTCGCAAAGGTGGCGAAGTTGTTGACTTAGAAGTTCTCGGCGCCACATTGTACACATGTGTTGTGTGGGTGGTAAATTGCCAAATGGCATTATCGATCACTTACTTTACATACATACAACATATATTCATATGGGGAAGCATCGGAGTATGGTACATTTTCCTCTTGGCATATGGAGCTATAGATCCTTCTATATCAACAACTGCTTATAAGGTCTTCATTGAAGCATGTGCGCCGTCACTATCTTATTGGATTGTTACTTTGCTCGTTCTTATTGCCGCATTGCTTCCATATTTCGCGTACTCTACTATTCAACTGCGGTTCTTCCCGGTGTATCATCAAATGATACAATGGATAAGAAAGGATGGACAAGTTAATGATCCGGAATTTTGTGATATGGTGCGACAGAGATCTATTCGACATACAACGGTTGGATTCACTGCTCGTTTGGAAGCTTCTAGACGTTTTGAAGCGTCTAGACGTTCGGAAATATCATTAGTACCTATTGATGGGAAGTCTACAGTGAACCAATAA 3642 0.3753 MAGGGRRRHHHFSKIHAFSCGKASMKQDEHSLIGGPGFSRKVYCNDSERAMSSLYNYGDNYVRTTKYTLATFLPKSLFEQFRRVANFYFLVVAVLSFFPVAPYSAVSNVVPLLVVVSATMAKEFIEDFQRKKQDIEMNNRKVKVHSGGGVFDYSKWRDLKVGDIVKVEKDEYFPADLILLASNYDDAICYVDTMNLDGETNLKLKQALEGTSKFQEDSNFENFKAVIRCEDPNANLYAFVGSLELEEDQEDQQYPLAPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKVIYCLFFVLILVSFIGSIFFGIWTKKDIKNGRMKRWYLNPKDTTVYYDPHKAVLAAIYHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINNDLNMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERALSKRKDSYFGRKLKNDQNVAKAAESKSTIKGFNFSDERIMNGNWVRQPNANVIQSFLRVLAVCHTAIPEVDEATGKISYEAESPDEAAFVVAAREFGFEFYERTHAAISLHELDLNSNMKSERSYNILNVLEFSSARKRMSVIIRDHKGKLMLLSKGADSVMFELLGKNGREYEEQTKYHINEYADSGLRTLILAYRELDEEEYKQFNKELTDAKNLVSADQEQIVEDILQKIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKALEKMEDKSAAEAAIKASVVRQITEAKTFLSRSDDNSEALALIIDGKSLAYALEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEMFTSFSGQPAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNLLFSWKRIIGWALNGVTSSTIIFFFCIRALEHQSFRKGGEVVDLEVLGATLYTCVVWVVNCQMALSITYFTYIQHIFIWGSIGVWYIFLLAYGAIDPSISTTAYKVFIEACAPSLSYWIVTLLVLIAALLPYFAYSTIQLRFFPVYHQMIQWIRKDGQVNDPEFCDMVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPIDGKSTVNQ* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3768 1213 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1146 IPR032630 -
Tpr4g3768 1213 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 3 1191 - -
Tpr4g3768 1213 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1146 IPR023298 -
Tpr4g3768 1213 SUPERFAMILY HAD-like 425 923 IPR036412 -
Tpr4g3768 1213 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Tpr4g3768 1213 PRINTS P-type cation-transporting ATPase superfamily signature 754 764 - -
Tpr4g3768 1213 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Tpr4g3768 1213 SFLD Haloacid Dehalogenase 412 919 - -
Tpr4g3768 1213 SFLD p-type atpase 412 919 IPR044492 -
Tpr4g3768 1213 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Tpr4g3768 1213 Gene3D - 116 292 - -
Tpr4g3768 1213 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 503 705 IPR023299 GO:0000166
Tpr4g3768 1213 Gene3D - 544 679 IPR023299 GO:0000166
Tpr4g3768 1213 SUPERFAMILY Calcium ATPase, transduction domain A 143 290 IPR008250 -
Tpr4g3768 1213 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 834 950 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr4g3768 1213 CDD P-type_ATPase_APLT_Dnf-like 59 1028 - -
Tpr4g3768 1213 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 1191 - -
Tpr4g3768 1213 Pfam Phospholipid-translocating ATPase N-terminal 42 107 IPR032631 -
Tpr4g3768 1213 Gene3D - 700 908 IPR023214 -
Tpr4g3768 1213 Coils Coil 661 688 - -
Tpr4g3768 1213 Pfam E1-E2 ATPase 137 362 - -
Tpr4g3768 1213 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr4g3768 1213 Pfam Cation transport ATPase (P-type) 539 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3768 Tpr-Chr4 43606976 43612446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3768 1 1191 Primary Pumps ATPases AT1G68710 68.108 0.0 1756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3768 K01530 K14802 gmx:100799312 1997.25