Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3766 ATGAAACACAAAAAAGCGACGCCGGAAACAGAAACAACTTCGATTGATTACGCCATGGAAGCAGCATCTGGTCCCCACTTTTCCGGCCTTCGACTCGACGCTCGACTTTCATCATCCCCAACCTCTTCTTTCGCTCCCAATTCAACCCTAACCTCCGATTCTCTTCTCAATCAACCCTTCGTCATTGGTGTTTCCGGTGGAACTGCTTCTGGAAAAACCACTGTTTGTGATATGATCATTCAACAGCTTCACGATCATCGTGTAGTTCTTGTTAATCAGGATTCGTTTTATCGCGGGTTGAAACCGGAAGAGTTGGAACATGTTCACGAGTACAATTTTGATCACCCTGATGCTTTTGACACGGAGCAACTGTTAGAGTGTATGAAGAAGCTCATCAGTGGCCAAAGAGTCAAAATTCCCATTTATGACTTTAAGAAGCACCAACGCTCTTCTGATAGTTTCCGTCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCACGATCAAGGTGTCCGTGATCTGATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACAGTGGAAAGGGGTAGAGACATAAACTCTGTTCTCGAAATGTATGCAAAGTTTGTTAAGCCTGCTTTTGATGACTTTGTTCTACCATCAAAGAAATATGCTGATGTGATCATTCCTCGTGGAGGTGATAATCATGTTGCCATCGATTTGATTACACAACACATCCGCACAAAGCTTGGTCAACATGATCTATGCAAAATCTATCCAAACGTATATGTTATTCAATCTACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGATATATCAAAGCATGATTTTGTATTTTATTCTGATCGACTTATACGGCTGGTTGTTGAGCATGGTCTCGGTCATCTTCCTTTCACCGAAAAGCAAGTTGTCACTCCAACAGGATCTGTCTATACTGGTGTTGATTTCTGCAAGAAATTATGCGGTGTTTCAATTATTCGAAGTGGTGAAAGCATGGAAAATGCACTTCGTGCATGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCACCGGGATGGAGACAATGGAAAACAGCTTATATATGAAAAGCTTCCTAAGGATATATCAGAACGGCATGTCTTGCTTCTGGACCCTGTCCTTGCTACAGGCAATTCAGCCAACCAAGCAATTGAATTACTCATTCAGAAAGGAGTACCAGAATCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAAGGAATCCATTGTGTTTGTAAAAGGTTCCCAGCATTGAAAATTGTCACATCTGAGATTGATGTTGCATTAAATGAAGAGTTTCGTGTTATCCCTGGATTGGGTGAATTTGGTGATCGCTACTTTGGCACTGATGATTGA 1443 0.413 MKHKKATPETETTSIDYAMEAASGPHFSGLRLDARLSSSPTSSFAPNSTLTSDSLLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLKPEELEHVHEYNFDHPDAFDTEQLLECMKKLISGQRVKIPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQGVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEMYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLITQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPALKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3766 480 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 41 477 IPR029930 GO:0004849|GO:0044206
Tpr4g3766 480 Gene3D - 263 478 IPR029057 -
Tpr4g3766 480 PANTHER URIDINE KINASE 41 477 - -
Tpr4g3766 480 CDD PRTases_typeI 336 451 IPR000836 -
Tpr4g3766 480 TIGRFAM udk: uridine kinase 59 259 IPR000764 -
Tpr4g3766 480 Pfam Uracil phosphoribosyltransferase 277 478 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 59 76 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 89 100 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 134 149 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 191 201 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 205 216 - -
Tpr4g3766 480 PRINTS Uridine kinase signature 227 240 - -
Tpr4g3766 480 SUPERFAMILY PRTase-like 262 479 IPR029057 -
Tpr4g3766 480 CDD UMPK 61 259 IPR000764 -
Tpr4g3766 480 ProSiteProfiles UvrC family, homology region profile. 165 248 IPR001162 GO:0009381
Tpr4g3766 480 Gene3D - 56 262 IPR027417 -
Tpr4g3766 480 Pfam Phosphoribulokinase / Uridine kinase family 61 247 IPR006083 GO:0005524|GO:0016301
Tpr4g3766 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 252 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3766 Tpr-Chr4 43586104 43592534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3766 8 480 PRT Gene Family AT5G40870 86.335 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3766 K00876 - gmx:100780005 876.7