Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3760 ATGGCTTCTATGTTCAAAGCTGTCTCACACCCACTTTTCCTTATCTTGATTCTTTTCTCTGCCTCCCAATTTTTGGTCATCAATGGTGCTCAATTTGAAGTTGGAGGTAAAGTTGGTTGGGTTGTCCCTAACTCAAAGGACAAAGATGAAATGTATAACCAATGGGCTTCCCAAAATAGATTCAAAATTGATGACACCATTCATTTCAAGTACGAGAAAGACTCGGTGATGGTGGTGAGTGAAGAAGAATATGAAAAATGCAAATCCGCTCGTCCACTCTTTTTCGGCAACAATGGCGACACGGTTTTCAAATTTGAGCGACCGGGATTGTTCTACTTCATTAGTGGTGTTAGTGGTCATTGTACAAGAGGACAGAAAATGATCATCAAGGTTTTGGACATTGAACCAGAAGAACAAGAACCAATTACAGCACCCTCACCACAATCTTCAAATGAGAATGCACCAACAATACATTCTAAAGCTGCTCAAATAACTCCTATTACTATCACAATATCCACACTCTTTGCTTTGTTGAGTTTTTAG 543 0.3941 MASMFKAVSHPLFLILILFSASQFLVINGAQFEVGGKVGWVVPNSKDKDEMYNQWASQNRFKIDDTIHFKYEKDSVMVVSEEEYEKCKSARPLFFGNNGDTVFKFERPGLFYFISGVSGHCTRGQKMIIKVLDIEPEEQEPITAPSPQSSNENAPTIHSKAAQITPITITISTLFALLSF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3760 180 CDD OsENODL1_like 30 132 IPR041846 -
Tpr4g3760 180 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Tpr4g3760 180 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Tpr4g3760 180 PANTHER EARLY NODULIN-LIKE PROTEIN 5 12 147 - -
Tpr4g3760 180 ProSiteProfiles Phytocyanin domain profile. 30 133 IPR003245 GO:0009055
Tpr4g3760 180 PANTHER BLUE COPPER PROTEIN 12 147 IPR039391 GO:0009055
Tpr4g3760 180 Gene3D - 29 135 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3760 Tpr-Chr4 43534989 43535823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3760 9 132 Phytocyanin Superfamily AT3G18590 58.065 4.66e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3760 - - mtr:MTR_4g112310 225.328