Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3759 ATGAAAAAGAAAGATCTACGATACAATATGAGCTTCAACTTGACTCATGATAATAACTCTTCATTTCACATATGTACATTCATCTTCTTCGTTCTTGTTATAAGTTTAAGATTGAGTTGCTCTTCTCAAGTTGATGAGGTAACAAGGTTACCTAATCAACCCAAAGTTGGATTCAAACAATATGCCGGGTATGTTTTCCTTGATCATGACAGAGCCCTGTTCTACTATTTCGTCGAAGCTCAGATAGATCCTGCTTCAAAACCACTCGTACTTTGGCTCAATGGAGGTCCCGGCTGTTCGTCCATTGGACAAGGAGCATTTGGTGAACATGGTCCTTTCAAGCCTACAAGGAAAGGCCATTTGGTGAAAAACCACTATAGTTGGAACAGAGAAGCTAACATGATTTACCTAGACTCTCCTGTTGGTGTTGGCTTCTCATTTTCGGTCAACCAATCTTCTTATTATCTTGTGAATGATGAAATGACAGCGAGGGATAATCTGTTGTTTCTACAGGGCTGGTTCACAAAATTCCCCAAGTACAAAAACAACGACTTCTTTATAACCGGGGAAAGCTATGCAGGTCATTATGCACCTCAACTTGCACAACTTATCCTCCAAACCAAATCCACCAACATTAACTTGAAGGGGATAGCCATAGGAAATCCTCTTCTAGAATTCAACAGAGATTTCAACTCTGATGCTGATTTTTGGTGGTCCCATGGACAAATTAAAGATTCGACATTTCAGATGTTAAAAACAGTATGCAACTATTCCACCATTCGAAGACAAGGTCGATCTGGGAAACTTAGTCCCAATTGTTCAGAAGTGAACCAAAAATTATCAATGGAGGTTGGTGGATATACTGATACTTTTGATGTTATTGCTGATATGTGTCCACCACCAGAAAAACACCAAGCTTATGTATTGACTGAAATGCAAGCTGCTGCAAAGAAGATAGACGTATGTGTGGAAGATGAAACCGTCACATACTTGAATAGGAAAGAAGTGTACAATGCACTAAATGCCAAGCTTGTAGGGATAACCCACTGGTCAGCCTGCAGTTCAGTTCTAGTATATAATTTTCAGAATCTTGAGATTCCAACAATCTCTTTGCTAGGGAGACTTGTAAAATCAGGCGTAAGAGTTGTAGTATACAGTGGAGATCAAGATTCTATGATCCCATTTATTGGAACACGGTCGTTAATAAATGAATTGGCCAAGGATCTAGGATTGAACATAACTGAGGAGTATAGAGCTTGGTTTAGGAGTAAACATGTTGCAGGATGGACAGAGGTATATGGTGACATACTCACCTTTGCAACAATAAGAGGAGCTGGACATGCCGCGCCCTTTTATCAACCAGGGAGGTCCCTGCTGCTTATCAAGGCATTTTTGGATGGAAACCCACTTCCAAATAGACATTGA 1425 0.4014 MKKKDLRYNMSFNLTHDNNSSFHICTFIFFVLVISLRLSCSSQVDEVTRLPNQPKVGFKQYAGYVFLDHDRALFYYFVEAQIDPASKPLVLWLNGGPGCSSIGQGAFGEHGPFKPTRKGHLVKNHYSWNREANMIYLDSPVGVGFSFSVNQSSYYLVNDEMTARDNLLFLQGWFTKFPKYKNNDFFITGESYAGHYAPQLAQLILQTKSTNINLKGIAIGNPLLEFNRDFNSDADFWWSHGQIKDSTFQMLKTVCNYSTIRRQGRSGKLSPNCSEVNQKLSMEVGGYTDTFDVIADMCPPPEKHQAYVLTEMQAAAKKIDVCVEDETVTYLNRKEVYNALNAKLVGITHWSACSSVLVYNFQNLEIPTISLLGRLVKSGVRVVVYSGDQDSMIPFIGTRSLINELAKDLGLNITEEYRAWFRSKHVAGWTEVYGDILTFATIRGAGHAAPFYQPGRSLLLIKAFLDGNPLPNRH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3759 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Tpr4g3759 474 Gene3D alpha/beta hydrolase 40 471 IPR029058 -
Tpr4g3759 474 SUPERFAMILY alpha/beta-Hydrolases 50 470 IPR029058 -
Tpr4g3759 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Tpr4g3759 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Tpr4g3759 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Tpr4g3759 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Tpr4g3759 474 Pfam Serine carboxypeptidase 54 467 IPR001563 GO:0004185|GO:0006508
Tpr4g3759 474 PANTHER CARBOXYPEPTIDASE 34 472 - -
Tpr4g3759 474 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Tpr4g3759 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3759 Tpr-Chr4 43508163 43511503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3759 330 470 Calmodulin-binding Proteins AT2G22960 31.206 1.49e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3759 K16297 - gmx:100805028 613.224