Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3744 ATGTATTCATCAAATAGTTGCCTCAATGGAAATAACCTAACATTTTCATCTTCTAAATCACCTTTTTCTAATTCCTTTGAAAGCAACTCAACTTCATCAAAAGATCATCATGATCAAAACATTCATTCCCTTTTTCCACTTCCTCCTTTCCCTTTCTTTCAATTCCCTAATTATCCTGATGATATTCATGATCCTTTTCAAGACAATCACCAAATCTTTGATGATGGTGATTTTCATCTTCATCATTCACCTCATGTTGTGAGTACTGATCATAATCAAAATCAACAAGATCAGCAGCGGCAGCGGCCTTCAAATTCATCGGTAATCAATGCTAACAACGATATTGTTGTTCGTAATCTTGTTTCTGAAGCAGGTGATACTAAAGGAAAAACAATAGTGAATCATCAGGTGAAGCAGATCCAACAAAGAAAAAGATCTAGCAAACGGGATCGGCATAGCAAGATAAAAACCGCGAAAGGACTAAGAGATCGGAGAATGAGATTGTCTCTTGAAGTTGCAAAGAGGTTTTTTGGTCTTCAAGATATGTTAGGATTTGAAAAAGCAAGTAAAACAGTTGATTGGTTACTCAACCAATCAAAACATGAAATCAAACACCTTGCAAGAGAAAAGAATCTTCATTTTCCTACCAAGAGTGCATCTTCAACTTCTGAATGTACTGAAGGAGTTTCAAGCTTGGATAATGAAGTTGAAAATCTAGAAGAGCCACAACAAAAACAAGAAACGGTGGTTATGATGAAGAAGAGAACAAGAAATAGAACTAATAAGGTTTGTAGAAAGAGTGCATTCAATTCTATTGGTAGAGAAAAGGCAAGAGAAAGAGCAAGAGAAAGAACAAAAGAAAAATTAATGAAAGCTAGAACTAGAACATCACTAGTTGATGAATCAAGTTCAAAGCAATGTAATGATGAAGAAGAAGGAACAAAAACTAACCTTATTTGGAACCCTTTTGAAAGTGTTGAAGAATCTGGTGGATGTACAAATCAAAGACAAAGTGTGAATCATCCTTCTTTTGATCATGTGAAGCTGATTAATGAAGGTGAAGTTGAAAGAAGCTGTCAAAAAGCAAAGGAACAAGATTCAGAAGAAGATGATTCTTTGTTCATTATGAGCAAATGGAGTCCACCTTTGATGTTCAATTCTCTCAATAACCTTCAACAACATCAATTTGAACAATTTCATCAATCTATGGAAAAACCATGTTGGGAAGGCTACAACAACCGCATCTAA 1248 0.3494 MYSSNSCLNGNNLTFSSSKSPFSNSFESNSTSSKDHHDQNIHSLFPLPPFPFFQFPNYPDDIHDPFQDNHQIFDDGDFHLHHSPHVVSTDHNQNQQDQQRQRPSNSSVINANNDIVVRNLVSEAGDTKGKTIVNHQVKQIQQRKRSSKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKHEIKHLAREKNLHFPTKSASSTSECTEGVSSLDNEVENLEEPQQKQETVVMMKKRTRNRTNKVCRKSAFNSIGREKARERARERTKEKLMKARTRTSLVDESSSKQCNDEEEGTKTNLIWNPFESVEESGGCTNQRQSVNHPSFDHVKLINEGEVERSCQKAKEQDSEEDDSLFIMSKWSPPLMFNSLNNLQQHQFEQFHQSMEKPCWEGYNNRI* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3744 415 MobiDBLite consensus disorder prediction 87 111 - -
Tpr4g3744 415 MobiDBLite consensus disorder prediction 273 295 - -
Tpr4g3744 415 PANTHER TRANSCRIPTION FACTOR TCP18 60 379 - -
Tpr4g3744 415 MobiDBLite consensus disorder prediction 19 38 - -
Tpr4g3744 415 Pfam TCP family transcription factor 147 290 IPR017887 -
Tpr4g3744 415 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 60 379 IPR005333 GO:0003700
Tpr4g3744 415 MobiDBLite consensus disorder prediction 141 158 - -
Tpr4g3744 415 MobiDBLite consensus disorder prediction 138 158 - -
Tpr4g3744 415 ProSiteProfiles TCP domain profile. 148 206 IPR017887 -
Tpr4g3744 415 ProSiteProfiles R domain profile. 271 288 IPR017888 -
Tpr4g3744 415 MobiDBLite consensus disorder prediction 273 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3744 Tpr-Chr4 43371107 43373472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3744 132 403 TCP Transcription Factor Family AT3G18550 32.797 3.32e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr4g3744 TCP 4.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3744 - - gmx:100803669 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3744 4 43371107 43373472 Tpr4g3744 4 43371107 43373472 ECH