Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3741 ATGTCATCATCAAGTGGAACAATTTGGAGCTATGAAGAAGAAAAATCATTTGAGAATGCAATAGCCATGCATTGGAATGAAAAAGAAGAAGAAGATTCAAATGAACAATGGGAAAAGATTGCTTCATGTGTCCCTAACAAAACCATGGAAGAAGTGAAACAACATTACCAATTATTGGTAGATGATGTTAGTGCAATTGAGGCAGGTCATGTATCATTTCCAAATTATGCTAATGATTTAGAAACTACTACTAATTCTTCAAATAAAGATTCTTCTAAATCCTCCACAAGTTCATATAAGAGATCATCAAGTTGTAATTTTGGAAGTGGCTTTTCTGGATTAGGACATGACTCTAATCACCATAGTAGTGGTAAAGGTGGATTGTCGAGGTCTTCATCGGAACAAGAAAGACGAAAAGGAATTCCATGGACAGAAGAAGAACATAGGCTATTTTTACTTGGTCTAGACAAATTTGGAAAAGGAGATTGGAGGAGTATATCAAGGAACTTTGTGATATCAAGAACACCAACACAAGTAGCAAGCCACGCACAAAAGTATTTCATAAGGTTGAATTCAATGAATAGAGATAGAAGAAGGTCTAGTATTCATGATATTACTAGTGTTAACAATGGAGATGTAGCTAATAATCATCAAGCACCAATAACAGGTCAACATGGTAACACAATTCCTTCAAATACAATGGGTTTAGGACAATCAATGAAGCATAGAGTTCAACCTCATCATCATCATCATGGTGGTTTAGGAATGTATGGAGCACCAGTTGGACATCCTGTTGTTGCTCCTCCTGCTCATATGACATCTGCAGTTGGAACTCCTGTTATGCTTCCTCATCATCATCCTCATCATCCACCTTATGTTGTACCTCTTGCTTACCCTATGGCACCTCCAACAATGCACCAATAA 924 0.3701 MSSSSGTIWSYEEEKSFENAIAMHWNEKEEEDSNEQWEKIASCVPNKTMEEVKQHYQLLVDDVSAIEAGHVSFPNYANDLETTTNSSNKDSSKSSTSSYKRSSSCNFGSGFSGLGHDSNHHSSGKGGLSRSSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNHQAPITGQHGNTIPSNTMGLGQSMKHRVQPHHHHHGGLGMYGAPVGHPVVAPPAHMTSAVGTPVMLPHHHPHHPPYVVPLAYPMAPPTMHQ* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3741 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 135 191 IPR017930 -
Tpr4g3741 307 Gene3D - 1 73 - -
Tpr4g3741 307 SUPERFAMILY Homeodomain-like 7 64 IPR009057 -
Tpr4g3741 307 PANTHER TRANSCRIPTION FACTOR MYBS1 5 306 - -
Tpr4g3741 307 ProSiteProfiles SANT domain profile. 143 191 IPR017884 -
Tpr4g3741 307 MobiDBLite consensus disorder prediction 118 141 - -
Tpr4g3741 307 CDD SANT 9 60 IPR001005 -
Tpr4g3741 307 CDD SANT 142 187 IPR001005 -
Tpr4g3741 307 ProSiteProfiles Myb-like domain profile. 135 187 IPR001005 -
Tpr4g3741 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 139 189 IPR006447 GO:0003677
Tpr4g3741 307 PANTHER TRANSCRIPTION FACTOR KUA1 5 306 - -
Tpr4g3741 307 SUPERFAMILY Homeodomain-like 137 192 IPR009057 -
Tpr4g3741 307 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Tpr4g3741 307 Pfam Myb-like DNA-binding domain 9 58 IPR001005 -
Tpr4g3741 307 Pfam Myb-like DNA-binding domain 142 187 IPR001005 -
Tpr4g3741 307 SMART sant 139 189 IPR001005 -
Tpr4g3741 307 SMART sant 5 62 IPR001005 -
Tpr4g3741 307 Gene3D - 141 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3741 Tpr-Chr4 43322198 43324079 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr4g3741 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3741 - - gmx:778049 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3741 4 43322198 43324079 Tpr4g3741 4 43322198 43324079 ECH