Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3726 ATGTCTTCCCATATTTTCATTTTCATTTTCATTTTTTTATTTATACTGAGTTTCCATTCCCGAGTCATCAACTCGGAACCAACTCAAGACAAGCAAGCACTCCTTGCTTTCATTTCACAAACACCACACTCTAACCGTCTTCAATGGAACTCAACCGATTCCGTTTGTAACTGGGTTGGTATTCAATGTGACTCTACTCAATCATATGTTTTCTCTCTCCGTTTACCTGCCGTTGATCTTGTCGGTAAAGTTCCACCCAACACAATCGGACGGTTATCAAATCTCCGTGTTCTTAGTCTCCGTTCTAATGCTCTTTCCGGTGAGATCCCTTCTGATTTTTCTAATTTGACTTTTCTTCGTAGTATTTATTTACAGAATAATAAATTCTCCGGTGAGTTTCCGTCTAGTTTAACTCGCTTGACTCGTTTGACTCGGTTGGATCTTTCTTCTAATAACTTCACCGGTTCAATTCCTTTCTCTATCAACAATTTGACTCATCTTACTGGTTTGTTCTTAGAGAACAACACGTTCTCCGGTACTCTTCCGAGTATCACTGCAAATTTGAACGGTTTCAATGTTTCTAACAACAATCTCAACGGTTCAATCCCGAAAACACTCGAGAAATTCCCTGAATCATCGTTCGCCGGAAACTTAGATCTCTGTGGTCCACCGTTGAAATCATGCACACCGTTTTTTCCGGCGCCGGCTCCGTCACCGGATGCAATTCCACCGGCTGATAAACCAAAGCACCACAAATCCAAGAAACTCTCCACCGGCGCCATTGTCGCAATTGTAGTTGGTTCCATTTTATTCATAGCTTTACTGCTTCTAATACTATTACTCTGTCTCCGGAAACGCCGTCGCCGGACACCAGCAAAACCACCAAAGCCAGTAGTTACAGCAGCTCGTTCTGTTCCGGCAGAAGCCGGAACATCATCTTCGAAAGACGATATAACCGGCGGTTCAGCCGAAGCGGAAAGGGAGAGGAACAAATTGGTATTTTTCGATGGAGGGATATATAGTTTTGATTTGGAGGATTTGCTTAGAGCTTCTGCGGAGGTTTTGGGTAAGGGTAGTGTTGGAACTTCGTATAAAGCGGTTTTAGAAGAAGGAACTACGGTGGTTGTTAAAAGGTTGAAAGATGTTGTTGTAACTAAGAAAGAATTTGAGATGCAAATGGAAATTTTGGGTAAAATTAAGCATGAGAATGTTGTTCCTCTTAGAGCTTTTTACTTCTCTAAAGATGAGAAATTGCTTGTTTATGATTACATGCCTGCTGGTAGCTTATCTGCGTTACTTCACGGGAGCAGAGGATCTGGTCGAACGCCGTTAGATTGGGACAACCGGATGAGAATAGCCCTCGGAGCATCAAGAGGACTGGCATGCCTTCATGTGTCCGGCAAAGTGATCCATGGCAACATCAAATCCTCCAACATCCTCCTTAAAGGGCCTGACCACGATGCAAGTGTTTCAGACTTTGGTCTCAACCCATTATTTGGAAACGGGTCCCCATCAAACCGTGTTGCAGGTTACCGTGCACCAGAAACCCTAGAAACCCGAAAAGTCACCTTCAAATCCGACGTGTACAGCTTTGGAGTCTTGCTATTGGAGCTATTAACAGGAAAAGCACCCAATCAAGCTTCACTTGGAGAAGAAGGAATCGATCTACCAAGGTGGGTCCAATCCGTTGTTCGTGAAGAATGGACCGCAGAAGTTTTTGACGCCGAGTTGATGAGGTTTCATAACATTGAAGAAGAAATGGTTCAATTGTTACAGATTGCGATGGCTTGTGTTTCTGTGGTCCCTGATCAAAGACCAAGTATGCAAGATGTGGTACGCATGATTGAGGATATGCATCGCGGTGAAACCGACGAGGGTCTCCGACAGTCGTCGGATGATCCTTCAAAAGGATCCGAGGGTCATACTCCGCCTCCCGAATCGAGGACTCCACCTAGATCACGCACACCGTAG 1971 0.4429 MSSHIFIFIFIFLFILSFHSRVINSEPTQDKQALLAFISQTPHSNRLQWNSTDSVCNWVGIQCDSTQSYVFSLRLPAVDLVGKVPPNTIGRLSNLRVLSLRSNALSGEIPSDFSNLTFLRSIYLQNNKFSGEFPSSLTRLTRLTRLDLSSNNFTGSIPFSINNLTHLTGLFLENNTFSGTLPSITANLNGFNVSNNNLNGSIPKTLEKFPESSFAGNLDLCGPPLKSCTPFFPAPAPSPDAIPPADKPKHHKSKKLSTGAIVAIVVGSILFIALLLLILLLCLRKRRRRTPAKPPKPVVTAARSVPAEAGTSSSKDDITGGSAEAERERNKLVFFDGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYMPAGSLSALLHGSRGSGRTPLDWDNRMRIALGASRGLACLHVSGKVIHGNIKSSNILLKGPDHDASVSDFGLNPLFGNGSPSNRVAGYRAPETLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMACVSVVPDQRPSMQDVVRMIEDMHRGETDEGLRQSSDDPSKGSEGHTPPPESRTPPRSRTP* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3726 656 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Tpr4g3726 656 SUPERFAMILY Protein kinase-like (PK-like) 353 615 IPR011009 -
Tpr4g3726 656 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Tpr4g3726 656 Gene3D Phosphorylase Kinase; domain 1 318 423 - -
Tpr4g3726 656 PANTHER OS05G0480400 PROTEIN 9 636 - -
Tpr4g3726 656 Gene3D Ribonuclease Inhibitor 188 228 IPR032675 -
Tpr4g3726 656 MobiDBLite consensus disorder prediction 617 656 - -
Tpr4g3726 656 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Tpr4g3726 656 MobiDBLite consensus disorder prediction 617 635 - -
Tpr4g3726 656 PANTHER OS05G0588300 PROTEIN 9 636 - -
Tpr4g3726 656 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3726 656 MobiDBLite consensus disorder prediction 292 324 - -
Tpr4g3726 656 Pfam Leucine rich repeat 82 129 IPR001611 GO:0005515
Tpr4g3726 656 Pfam Protein kinase domain 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3726 656 CDD STKc_IRAK 355 618 - -
Tpr4g3726 656 SUPERFAMILY L domain-like 29 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3726 Tpr-Chr4 43176790 43180656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3726 1 636 Receptor kinase-like Gene Family AT5G58300 53.953 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g3726 Pkinase 4.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3726 - - gmx:100806857 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3726 4 43176790 43180656 Tpr4g3726 4 43176790 43180656 ECH